Alignment Comparison
This form accepts two pairwise alignments of the same sequences and
returns the
shift score reflecting the similarity of the two alignments.
If one alignment is a distinguished alignment, such as one produced by
a structure-structure alignment tool, and the other is a predicted alignment,
the score reflects the prediction accuracy.
The alignments must be in FASTA format.
Alignment comparison server has been discontinued.
Email Melissa Cline,
cline@cse.ucsc.edu
with questions and problems
UCSC Computational Biology Group ,
SAM Home Page
(Last Update:
12:53 PST 22 January 2003
)