BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL051W Annotated|01:48565:51708| frame 1; YAL051W/OAF1; Verified; this gene contains 1 exon (1047 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL051W OAF1 SGDID:S0000048, Chr I from 48564-51752 2083 0.0 YOR363C PIP2 SGDID:S0005890, Chr XV from 1020215-1023205, revers... 759 0.0 >YAL051W OAF1 SGDID:S0000048, Chr I from 48564-51752 Length = 1062 Score = 2083 bits (5396), Expect = 0.0 Identities = 1041/1041 (100%), Positives = 1041/1041 (100%) Query: 1 MVENSTQKAPHAGNDDNSSTKPYSEAFFLGFNNPTPGLEAEHSSTSPAPENSETHNRKRN 60 MVENSTQKAPHAGNDDNSSTKPYSEAFFLGFNNPTPGLEAEHSSTSPAPENSETHNRKRN Sbjct: 1 MVENSTQKAPHAGNDDNSSTKPYSEAFFLGFNNPTPGLEAEHSSTSPAPENSETHNRKRN 60 Query: 61 RILFVCQACWKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIPSKDAIISRLEKDMF 120 RILFVCQACWKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIPSKDAIISRLEKDMF Sbjct: 61 RILFVCQACWKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIPSKDAIISRLEKDMF 120 Query: 121 YWKDKAMKLLTEREVNESGKRSASPINTNNASGDSPDTKKQHKMEPIYEQSGNGDINNGT 180 YWKDKAMKLLTEREVNESGKRSASPINTNNASGDSPDTKKQHKMEPIYEQSGNGDINNGT Sbjct: 121 YWKDKAMKLLTEREVNESGKRSASPINTNNASGDSPDTKKQHKMEPIYEQSGNGDINNGT 180 Query: 181 RNDIEINLYRSHPTMIMSKVMKREVKPLSENYIIIQDCFLKILVTSVFLDTSKNTMIPAL 240 RNDIEINLYRSHPTMIMSKVMKREVKPLSENYIIIQDCFLKILVTSVFLDTSKNTMIPAL Sbjct: 181 RNDIEINLYRSHPTMIMSKVMKREVKPLSENYIIIQDCFLKILVTSVFLDTSKNTMIPAL 240 Query: 241 TANANITRAQPSVANNLLKLKEMLIRQCQTEDEKNRVNEFTDRILQNTNSNRNLKIGMLL 300 TANANITRAQPSVANNLLKLKEMLIRQCQTEDEKNRVNEFTDRILQNTNSNRNLKIGMLL Sbjct: 241 TANANITRAQPSVANNLLKLKEMLIRQCQTEDEKNRVNEFTDRILQNTNSNRNLKIGMLL 300 Query: 301 SMLYNSVGYQYLEDHCPQGGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPF 360 SMLYNSVGYQYLEDHCPQGGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPF Sbjct: 301 SMLYNSVGYQYLEDHCPQGGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPF 360 Query: 361 IELEIFEESLSQTIFPDPNNPSKVQIRMGSTHLRAKVENLSLLLVILKLSYMSIRFLDHS 420 IELEIFEESLSQTIFPDPNNPSKVQIRMGSTHLRAKVENLSLLLVILKLSYMSIRFLDHS Sbjct: 361 IELEIFEESLSQTIFPDPNNPSKVQIRMGSTHLRAKVENLSLLLVILKLSYMSIRFLDHS 420 Query: 421 TADSSFYLSKEIIDKYPIPNDFILLSPRCLASENWCACANENIISCLLYIWSFFAFSPEE 480 TADSSFYLSKEIIDKYPIPNDFILLSPRCLASENWCACANENIISCLLYIWSFFAFSPEE Sbjct: 421 TADSSFYLSKEIIDKYPIPNDFILLSPRCLASENWCACANENIISCLLYIWSFFAFSPEE 480 Query: 481 GDFFLEHPTDVISSLIMMLSTSIGLHRDPSDFPQLISPSTSDKRTLNHRRILWLSIVTVC 540 GDFFLEHPTDVISSLIMMLSTSIGLHRDPSDFPQLISPSTSDKRTLNHRRILWLSIVTVC Sbjct: 481 GDFFLEHPTDVISSLIMMLSTSIGLHRDPSDFPQLISPSTSDKRTLNHRRILWLSIVTVC 540 Query: 541 SFEASLKGRHSVSPISLMALFLNIKDPDSLTVYMNRVRGDLSDINNHTLLRIHKFTFKRA 600 SFEASLKGRHSVSPISLMALFLNIKDPDSLTVYMNRVRGDLSDINNHTLLRIHKFTFKRA Sbjct: 541 SFEASLKGRHSVSPISLMALFLNIKDPDSLTVYMNRVRGDLSDINNHTLLRIHKFTFKRA 600 Query: 601 QLALLLSDLDNLTMTYYGSFHLHSIEFIREKIEIFVEENFPIVPLKSVAQDKSDLDDMNV 660 QLALLLSDLDNLTMTYYGSFHLHSIEFIREKIEIFVEENFPIVPLKSVAQDKSDLDDMNV Sbjct: 601 QLALLLSDLDNLTMTYYGSFHLHSIEFIREKIEIFVEENFPIVPLKSVAQDKSDLDDMNV 660 Query: 661 ISEMNILSSENSSSFHNRIMNKLLMLRTSMAVFLHFETLITKDKSIFPFYKKYFMVSCMD 720 ISEMNILSSENSSSFHNRIMNKLLMLRTSMAVFLHFETLITKDKSIFPFYKKYFMVSCMD Sbjct: 661 ISEMNILSSENSSSFHNRIMNKLLMLRTSMAVFLHFETLITKDKSIFPFYKKYFMVSCMD 720 Query: 721 ALSLINYFNKFFNGEYRHAISSLTSFNVTKFIQLALSSTIFSLLGIILRIGLAIHMLSSE 780 ALSLINYFNKFFNGEYRHAISSLTSFNVTKFIQLALSSTIFSLLGIILRIGLAIHMLSSE Sbjct: 721 ALSLINYFNKFFNGEYRHAISSLTSFNVTKFIQLALSSTIFSLLGIILRIGLAIHMLSSE 780 Query: 781 VQKLSGTTDPRIKELNTKVEKFSTLQRDLESALEGIYCSASEHLRFTYFPVFKMLALFDV 840 VQKLSGTTDPRIKELNTKVEKFSTLQRDLESALEGIYCSASEHLRFTYFPVFKMLALFDV Sbjct: 781 VQKLSGTTDPRIKELNTKVEKFSTLQRDLESALEGIYCSASEHLRFTYFPVFKMLALFDV 840 Query: 841 IVQRMRKGELWHGIFTMIQMEQMHSRIIKTLSITLGVKLDKKDRLLEELMACNHVANFSV 900 IVQRMRKGELWHGIFTMIQMEQMHSRIIKTLSITLGVKLDKKDRLLEELMACNHVANFSV Sbjct: 841 IVQRMRKGELWHGIFTMIQMEQMHSRIIKTLSITLGVKLDKKDRLLEELMACNHVANFSV 900 Query: 901 EDIDELNRNIKKEIQISSGLKPPVNTIDLTNGEPFGNAVPTFTKTWSSSLDNLEKLSSAA 960 EDIDELNRNIKKEIQISSGLKPPVNTIDLTNGEPFGNAVPTFTKTWSSSLDNLEKLSSAA Sbjct: 901 EDIDELNRNIKKEIQISSGLKPPVNTIDLTNGEPFGNAVPTFTKTWSSSLDNLEKLSSAA 960 Query: 961 AVGQSLDYNSGLRQGPLAGGGSKEQTPIAGMNNLNNSINATPIVDNSSGSQLPNGFDRGQ 1020 AVGQSLDYNSGLRQGPLAGGGSKEQTPIAGMNNLNNSINATPIVDNSSGSQLPNGFDRGQ Sbjct: 961 AVGQSLDYNSGLRQGPLAGGGSKEQTPIAGMNNLNNSINATPIVDNSSGSQLPNGFDRGQ 1020 Query: 1021 ANNTPFPGYFGGLDLFDYDFL 1041 ANNTPFPGYFGGLDLFDYDFL Sbjct: 1021 ANNTPFPGYFGGLDLFDYDFL 1041 >YOR363C PIP2 SGDID:S0005890, Chr XV from 1020215-1023205, reverse complement Length = 996 Score = 759 bits (1960), Expect = 0.0 Identities = 419/1025 (40%), Positives = 627/1025 (61%), Gaps = 63/1025 (6%) Query: 50 ENSETHNR---KRNRILFVCQACWKSKTKCDREKPECGRCVKHGLKCVYDVSKQPAPRIP 106 E+S NR KRNR+ FVCQAC K+KTKCD+EKP CGRC K L C+YDV++Q APR P Sbjct: 6 ESSPAMNRVGKKRNRLSFVCQACRKAKTKCDQEKPRCGRCTKQNLFCIYDVARQAAPRNP 65 Query: 107 SKDAIISRLEKDMFYWKDKAMKLLTEREVNESGKRSASPINTNNASGDSPDTKKQHKMEP 166 +KDA I+RL+K++ YW++K + L E++ + + P Sbjct: 66 NKDATIARLKKEIRYWRNKTVDLTQEKKDFYTALK-----------------------RP 102 Query: 167 IYEQSGNGDINNGTRNDIEINLYRSHPTMIMSKVMKREVKPLSENYIIIQDCFLKILVTS 226 E + + N I+LY++HP +IM+KVMKRE+ PLSE Y+I QD FLK L+ S Sbjct: 103 TEELAARRTCKSLQENSFPISLYKTHPRLIMTKVMKREINPLSEKYLIFQDTFLKTLIAS 162 Query: 227 VFLDTSKNTMIPALTANANITRAQPSVANNLLKLKEMLIRQCQTEDEKNRVNEFTDRILQ 286 V L S+N+MIPAL A+ + +R QP V NN++K++E+L++ + E ++ +NEFTDR+LQ Sbjct: 163 VLLSCSRNSMIPALNADISRSRTQPCVKNNVVKMREVLLKNSKYESQRKSINEFTDRLLQ 222 Query: 287 NTNSNRNLKIGMLLSMLYNSVGYQYLEDHCPQGGEYSDLLRNLINECEAILPSYEIIERY 346 N + + ++S+LY++ YLED CP +YSDLL+ INE E LP IIE+Y Sbjct: 223 RKNPEEQIAVNKVISLLYSNRESSYLEDTCPTENDYSDLLKGYINEIEKTLPPKAIIEQY 282 Query: 347 KNHFYEYVYPSLPFIELEIFEESLSQTIFPDPNNPSKVQIRMGSTHLRAKVENLSLLLVI 406 +HF+E+++ +PF E+ EES+ T+ N +V++ MG+T +R K+ENL +LL+I Sbjct: 283 LSHFFEHIFHLIPFASKEMLEESIHTTV--QYNELGEVRLSMGTTLIRNKMENLCILLLI 340 Query: 407 LKLSYMSIRFLDHSTADSSFYLSKEIIDKYPIPNDFILLSPRCLASENWCACANENIISC 466 L+++Y+S+ F++ D S Y++KE++++YPI ++ I L+ + LASENWCACANEN ISC Sbjct: 341 LRIAYISLTFIEDKIEDYSPYITKEMLEQYPIQSEVIFLAQQILASENWCACANENTISC 400 Query: 467 LLYIWSFFAFSPEEGDFFLEHPTDVISSLIMMLSTSIGLHRDPSDFPQLISPSTSDKRTL 526 LLYIW F FSP EGDF LE P+DVI +L++++ TSIGLHRDPSDFP L P SDKR L Sbjct: 401 LLYIWCAFVFSPTEGDFLLEQPSDVIINLVILIGTSIGLHRDPSDFPALNHPEASDKRLL 460 Query: 527 NHRRILWLSIVTVCSFEASLKGRHSVSPISLMALFLNIKDPDSLTVYMNRVRGDLS-DIN 585 N RRI WLSI+++ + E+SLKGR VSP+S++ LF++++DP+ + +Y RV+ DL+ + Sbjct: 461 NLRRIQWLSIISMATLESSLKGRLLVSPLSMIDLFIDVRDPNCVEIYKKRVKKDLTGSES 520 Query: 586 NHTLLRIHKFTFKRAQLALLLSDLDNLTMTYYGSFHLHSIEFIREKIEIFVEENFPIVPL 645 + LL IH+ F RAQLAL LSDL+N+T++Y GS + ++E +R K ++ F L Sbjct: 521 DEQLLEIHEIFFHRAQLALFLSDLNNITISYSGSVPMDTLETLRVKANELLKNKF---QL 577 Query: 646 KSVAQDKSDLDDMNVISEMNILSSENSSSFHNRIMNKLLMLRTSMAVFLHFETLITKDKS 705 +SV D + D+ ++ S NS S +I+ KL+MLR S+A+ L+FETL + Sbjct: 578 RSV--DINIYDEEKTFQKLTFNSILNSISLSGQILGKLMMLRASIALMLYFETLAMERSE 635 Query: 706 IFPFYKKYFMVSCMDALSLINYFNKFFNGEYRHAISSLTSFNVTKFIQLALSSTIFSLLG 765 F+ KYF C D +SLI +F +FNG Y +SSL F TK IQLA+ +T+F+LL Sbjct: 636 CLSFFYKYFFQCCADTISLIRFFFLYFNGSYEKVLSSLVCFITTKVIQLAVPTTMFTLLV 695 Query: 766 IILRIGLAIHMLSSEVQKLSGTTD-PRIKELNTKVEKFSTLQRDLESALEGIYCSASEHL 824 II+R+ LA +ML + + + D + E+ K++ T++ + E L +Y AS++L Sbjct: 696 IIMRVELAKNMLLVKCNECNARGDISDLPEIKEKIKSLDTIKENFERLLLEVYLLASQNL 755 Query: 825 RFTYFPVFKMLALFDVIVQRMRKGELWHGIFTMIQMEQMHSRIIKTLSITLGVKLDKKDR 884 RF YF +FKML LFDV +QR+RKG+L+ G+F + + +I L +TLG+ LDK D Sbjct: 756 RFKYFYIFKMLTLFDVFIQRLRKGQLFSGLFVKVDKDLTTKKIATMLELTLGINLDKSDH 815 Query: 885 LLEELMACNHVANFSVEDIDELNRNIKKEIQISS-GLKPPVNTIDLTNGEPFGNAVPTFT 943 L++ L N NF+ +D+L + IK+ +I + G+ P N+++ + N PT Sbjct: 816 LIDRLKGKNLTVNFT---LDQLYQIIKEFDRIKNIGVADPQNSLNPSKPNMKDN-TPTIE 871 Query: 944 KTWSSSLDN-----LEKLSSAAAVGQSLDYN--------SGLRQGPLAGGGSKEQTPIAG 990 +SS++N + VG + Y+ + P + G S+ Sbjct: 872 LLLNSSVENESVPPYSSSNDPTNVGNASTYSLAHNISNQNNEENMPPSIGSSESNRAAPN 931 Query: 991 MNNL---NNSINATPIVDNSSGSQLPNGF----DRGQAN---NTPFPGYFGGLDLFDYDF 1040 +N + NN N+ ++N+ +LP+ F D ++ + P FG LD FDYD Sbjct: 932 LNFMPINNNYNNSGSNINNNDNVKLPSNFKNYYDPPMSSLDISMDVPDIFGSLDFFDYDL 991 Query: 1041 LFGND 1045 LF ND Sbjct: 992 LFQND 996 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,583,605 Number of Sequences: 6497 Number of extensions: 312294 Number of successful extensions: 1199 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1189 Number of HSP's gapped (non-prelim): 3 length of query: 1047 length of database: 2,996,526 effective HSP length: 100 effective length of query: 947 effective length of database: 2,346,826 effective search space: 2222444222 effective search space used: 2222444222 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL013W Annotated|01:129271:130533| frame 1; YAL013W/DEP1; Verified; this gene contains 1 exon (420 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL013W DEP1 SGDID:S0000011, Chr I from 129268-130356 650 0.0 >YAL013W DEP1 SGDID:S0000011, Chr I from 129268-130356 Length = 362 Score = 650 bits (1678), Expect = 0.0 Identities = 325/334 (97%), Positives = 326/334 (97%) Query: 1 MSQQTPQESEQTTAKEQDLDQESVLSNIDFNTDLNHNLNLSEYCISSDAGTEKMDSDEEK 60 MSQQTPQESEQTTAKEQDLDQESVLSNIDFNTDLNHNLNLSEYCISSDAGTEKMDSDEEK Sbjct: 1 MSQQTPQESEQTTAKEQDLDQESVLSNIDFNTDLNHNLNLSEYCISSDAGTEKMDSDEEK 60 Query: 61 SLANLPELKYAPKLSSLVKQETLTESLKRPHEDEKEAIDEAKKMKVPGENEDESKEEEKS 120 SLANLPELKYAPKLSSLVKQETLTESLKRPHEDEKEAIDEAKKMKVPGENEDESKEEEKS Sbjct: 61 SLANLPELKYAPKLSSLVKQETLTESLKRPHEDEKEAIDEAKKMKVPGENEDESKEEEKS 120 Query: 121 QELEEAIDSKEKSTDARDEQGDEGDNEEENNEEDNENENEHTAPPALVMPSPIEMEEQRM 180 QELEEAIDSKEKSTDARDEQGDEGDNEEENNEEDNENENEHTAPPALVMPSPIEMEEQRM Sbjct: 121 QELEEAIDSKEKSTDARDEQGDEGDNEEENNEEDNENENEHTAPPALVMPSPIEMEEQRM 180 Query: 181 TALKEITDIEYKFAQLRQKLYDNQLVRLQTELQMCLEGSHPELQVYYSKIAAIRDYKLHR 240 TALKEITDIEYKFAQLRQKLYDNQLVRLQTELQMCLEGSHPELQVYYSKIAAIRDYKLHR Sbjct: 181 TALKEITDIEYKFAQLRQKLYDNQLVRLQTELQMCLEGSHPELQVYYSKIAAIRDYKLHR 240 Query: 241 AYQRQKYELSCINTETIATRTFIHQDFHKKVTDLRARLLNRTTQTWYDINKERRDMDIVI 300 AYQRQKYELSCINTETIATRTFIHQDFHKKVTDLRARLLNRTTQTWYDINKERRDMDIVI Sbjct: 241 AYQRQKYELSCINTETIATRTFIHQDFHKKVTDLRARLLNRTTQTWYDINKERRDMDIVI 300 Query: 301 PDVNYHVPIKLDNKTLSCITGYASAAQLCYPGEP 334 PDVNYHVPIKLDNKTLSCITGYA+ P P Sbjct: 301 PDVNYHVPIKLDNKTLSCITGYAAHDSCAIPASP 334 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.310 0.129 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,838,926 Number of Sequences: 6497 Number of extensions: 147561 Number of successful extensions: 3880 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3871 Number of HSP's gapped (non-prelim): 1 length of query: 420 length of database: 2,996,526 effective HSP length: 93 effective length of query: 327 effective length of database: 2,392,305 effective search space: 782283735 effective search space used: 782283735 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAR042W Annotated|01:192613:196179| frame 1; YAR042W/SWH1; Verified; this gene contains 1 exon (1188 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAR044W OSH1 SGDID:S0000082, Chr I from 193595-196174 1756 0.0 YDL019C OSH2 SGDID:S0002177, Chr IV from 417659-421510, reverse ... 1203 0.0 YAR042W SWH1 SGDID:S0000081, Chr I from 192609-193379 466 e-131 YHR073W OSH3 SGDID:S0001115, Chr VIII from 242583-245573 168 4e-42 >YAR044W OSH1 SGDID:S0000082, Chr I from 193595-196174 Length = 859 Score = 1756 bits (4547), Expect = 0.0 Identities = 859/859 (100%), Positives = 859/859 (100%) Query: 330 MSSCSLHLDSSEKLKFEIIGGNNGVIRWHLKGNHPIETNRWVWAIQGAIRYAKDREILLH 389 MSSCSLHLDSSEKLKFEIIGGNNGVIRWHLKGNHPIETNRWVWAIQGAIRYAKDREILLH Sbjct: 1 MSSCSLHLDSSEKLKFEIIGGNNGVIRWHLKGNHPIETNRWVWAIQGAIRYAKDREILLH 60 Query: 390 NGPYSPSLALSHGLSSKVSNKENLHATSKRLTKSPHLSKSTLTQNDHDNDDDSTNNNNNK 449 NGPYSPSLALSHGLSSKVSNKENLHATSKRLTKSPHLSKSTLTQNDHDNDDDSTNNNNNK Sbjct: 61 NGPYSPSLALSHGLSSKVSNKENLHATSKRLTKSPHLSKSTLTQNDHDNDDDSTNNNNNK 120 Query: 450 SNNDYDDNNNNNNNDDDDYDDDDESRPLIEPLPLISSRSQSLSEITPGPHSRKSTVSSTR 509 SNNDYDDNNNNNNNDDDDYDDDDESRPLIEPLPLISSRSQSLSEITPGPHSRKSTVSSTR Sbjct: 121 SNNDYDDNNNNNNNDDDDYDDDDESRPLIEPLPLISSRSQSLSEITPGPHSRKSTVSSTR 180 Query: 510 AADIPSDDEGYSEDDSDDDGNSSYTMENGGENDGDEDLNAIYGPYIQKLHMLQRSISIEL 569 AADIPSDDEGYSEDDSDDDGNSSYTMENGGENDGDEDLNAIYGPYIQKLHMLQRSISIEL Sbjct: 181 AADIPSDDEGYSEDDSDDDGNSSYTMENGGENDGDEDLNAIYGPYIQKLHMLQRSISIEL 240 Query: 570 ASLNELLQDKQQHDEYWNTVNTSIETVSEFFDKLNRLTSQREKRMIAQMTKQRDVNNVWI 629 ASLNELLQDKQQHDEYWNTVNTSIETVSEFFDKLNRLTSQREKRMIAQMTKQRDVNNVWI Sbjct: 241 ASLNELLQDKQQHDEYWNTVNTSIETVSEFFDKLNRLTSQREKRMIAQMTKQRDVNNVWI 300 Query: 630 QSVKDLEMELVDKDEKLVALDKERKNLKKMLQKKLNNQPQVETEANEESDDANSMIKGSQ 689 QSVKDLEMELVDKDEKLVALDKERKNLKKMLQKKLNNQPQVETEANEESDDANSMIKGSQ Sbjct: 301 QSVKDLEMELVDKDEKLVALDKERKNLKKMLQKKLNNQPQVETEANEESDDANSMIKGSQ 360 Query: 690 ESTNTLEEIVKFIEATKESDEDSDADEFFDAEEAASDKKANDSEDLTTNKETPANAKPQE 749 ESTNTLEEIVKFIEATKESDEDSDADEFFDAEEAASDKKANDSEDLTTNKETPANAKPQE Sbjct: 361 ESTNTLEEIVKFIEATKESDEDSDADEFFDAEEAASDKKANDSEDLTTNKETPANAKPQE 420 Query: 750 EAPEDESLIVISSPQVEKKNQLLKEGSFVGYEDPVRTKLALDEDNRPKIGLWSVLKSMVG 809 EAPEDESLIVISSPQVEKKNQLLKEGSFVGYEDPVRTKLALDEDNRPKIGLWSVLKSMVG Sbjct: 421 EAPEDESLIVISSPQVEKKNQLLKEGSFVGYEDPVRTKLALDEDNRPKIGLWSVLKSMVG 480 Query: 810 QDLTKLTLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRMLYVAAFTASMYASTT 869 QDLTKLTLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRMLYVAAFTASMYASTT Sbjct: 481 QDLTKLTLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRMLYVAAFTASMYASTT 540 Query: 870 NRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESPKWDFYGECNVDSSFN 929 NRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESPKWDFYGECNVDSSFN Sbjct: 541 NRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESPKWDFYGECNVDSSFN 600 Query: 930 GRTFAVQHLGLWYITIRPDHNISVPEETYSWKKPNNTVIGILMGKPQVDNSGDVKVTNHT 989 GRTFAVQHLGLWYITIRPDHNISVPEETYSWKKPNNTVIGILMGKPQVDNSGDVKVTNHT Sbjct: 601 GRTFAVQHLGLWYITIRPDHNISVPEETYSWKKPNNTVIGILMGKPQVDNSGDVKVTNHT 660 Query: 990 TGDYCMLHYKAHGWTSAGAYEVRGEVFNKDDKKLWVLGGHWNDSIYGKKVTARGGELTLD 1049 TGDYCMLHYKAHGWTSAGAYEVRGEVFNKDDKKLWVLGGHWNDSIYGKKVTARGGELTLD Sbjct: 661 TGDYCMLHYKAHGWTSAGAYEVRGEVFNKDDKKLWVLGGHWNDSIYGKKVTARGGELTLD 720 Query: 1050 RIKTANSATGGPKLDGSKFLIWKANERPSVPFNLTSFALTLNALPPHLIPYLAPTDSRLR 1109 RIKTANSATGGPKLDGSKFLIWKANERPSVPFNLTSFALTLNALPPHLIPYLAPTDSRLR Sbjct: 721 RIKTANSATGGPKLDGSKFLIWKANERPSVPFNLTSFALTLNALPPHLIPYLAPTDSRLR 780 Query: 1110 PDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFVQEEHPVTKSLYWKFN 1169 PDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFVQEEHPVTKSLYWKFN Sbjct: 781 PDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFVQEEHPVTKSLYWKFN 840 Query: 1170 GEYWNKRKNHDFKDCADIF 1188 GEYWNKRKNHDFKDCADIF Sbjct: 841 GEYWNKRKNHDFKDCADIF 859 >YDL019C OSH2 SGDID:S0002177, Chr IV from 417659-421510, reverse complement Length = 1283 Score = 1203 bits (3113), Expect = 0.0 Identities = 647/1294 (50%), Positives = 856/1294 (66%), Gaps = 117/1294 (9%) Query: 1 MEQPDLSSVA----ISKPLLKLKLLDALRQGSFPNLQDLLKKQFQPLDDPNVQQVLHLML 56 M + DLS +SKPLLK+KLL+ L QG F +L+ L+ +FQP DDP+VQQVL+L+L Sbjct: 1 MSREDLSIAEDLNQVSKPLLKVKLLEVLGQGDFKHLKALVDNEFQPKDDPSVQQVLNLIL 60 Query: 57 HYAVQVAPMAVIKEIVHHWVS------TTNTTFLNIHLDLNERDSNGNTPLHIAAYQSRG 110 HYAVQVAP+ +IKEIV HWV +++ + IHLDLN +D NGNTPLH+AA QSR Sbjct: 61 HYAVQVAPILLIKEIVAHWVDQVGDEKSSSKSDDGIHLDLNYQDENGNTPLHLAAAQSRS 120 Query: 111 DIVAFLLDQPTINDCVLNNSHLQAIEMCKNLNIAQMMQVKRSTYVAETAQEFRTAFNNRD 170 D+++FLL Q +INDCV N +H Q ++MCK+LN+AQM+Q+KR Y ET R A N RD Sbjct: 121 DVISFLLSQKSINDCVKNKAHQQPLDMCKDLNVAQMIQLKRDDYFLETVHSLRAAMNKRD 180 Query: 171 FGHLESILSSPRNAELLDINGMDPETGDTVLHEFVKKRDVIMCRWLLEHGADPFKRDRKG 230 F L+SI +PRN LLDING+DPETG T+L+E+ +K+D+ MC+WLL+HGA+ +D KG Sbjct: 181 FSKLDSIWKNPRNLNLLDINGIDPETGTTLLYEYSQKKDIEMCQWLLKHGAEATVKDGKG 240 Query: 231 KLPIELVRKVNENDTATSTKIAIDIELKKLLERATREQSVI--DVTNNNLHEAPTYKGYL 288 + P++LV+ + + S + +I+LK LLE+ REQ+++ DV ++ + PTYKG+L Sbjct: 241 RSPLDLVKNI-KLPAKPSNNVTPEIKLKNLLEKNLREQAIVHEDVASS---KPPTYKGFL 296 Query: 289 KKWTNFAQGYKLRWFILSSDGKLSYYIDQADTKNACRGSLNMSSCSLHLDSSEKLKFEII 348 KKWTNFA GYKLRWFILS DG LSYY DQ+ RG+L +S+C LH+DSSEKL FE++ Sbjct: 297 KKWTNFAHGYKLRWFILSGDGNLSYYKDQSHVDRP-RGTLKVSTCRLHIDSSEKLNFELL 355 Query: 349 GGNNGVIRWHLKGNHPIETNRWVWAIQGAIRYAKDREILLHNGPYSPSLALSHGLSSKVS 408 GG G RW LKGNHPIET RWV AIQ AIR+AKD+EIL PSLAL + + +S Sbjct: 356 GGITGTTRWRLKGNHPIETTRWVNAIQSAIRFAKDKEILNKKKAVPPSLALKNKSPALIS 415 Query: 409 N-------------------KENLHATSKRLTKSPHLSKSTLTQNDHDNDDDSTNNNNNK 449 + KE + +S L + P + S ++ ND+ + + Sbjct: 416 HSKTQGSLPEASQYYQHTLHKEVIQPSSVSLYRRPSNNLSVVSSEIQLNDNLTESGKRFV 475 Query: 450 SN---NDYDDNNNNNNNDDDDYDDDDESRPLIEPLPLISSRSQSLSEITPGPHSRKSTVS 506 S N D + S ++ + S S S I P+ + S Sbjct: 476 SKMIENRLDGSKTPVGVHTGSALQRVRSSNTLKSNRSMQSGSGVASPIDKVPNGANLSQS 535 Query: 507 STRAADIPS-DDEGYSEDDSDDDGNSSYTMENGGEN-DGDED-LNAIYGPYIQKLHMLQR 563 +T S D Y ++ D+ NS E+ G N D DE+ + A YGPY +KL M ++ Sbjct: 536 NTTTGSTASLSDNNYIDNFEGDEANSDDEEEDLGINFDRDEEYIKAQYGPYKEKLDMYEQ 595 Query: 564 SISIELASLNELLQDKQQHDEYWNTVNTSIETVSEFFDKLNRLTSQREKRMIAQMTKQRD 623 +ISIEL+SL EL++ ++ E W T+ S+ S F KL LT +R+KR++ ++KQ D Sbjct: 596 AISIELSSLIELIEQEEPSPEVWLTIKKSLINTSTIFGKLKDLTYKRDKRLVDMVSKQGD 655 Query: 624 VNNVWIQSVKDLEMELVDKDEKLVALDKERKNLKKMLQKKLNNQPQVETEANEESDDANS 683 VNNVW+QSVK+LEMEL +K E+L ++DKER+ LKK+L KKL T N+ES + N Sbjct: 656 VNNVWVQSVKELEMELSNKTERLASIDKERRGLKKILHKKLLESHA--TAGNKESLE-ND 712 Query: 684 MIKGSQESTNTLEEIVKFIEATKESDEDSDA----------DEFFDAEEA-------ASD 726 + S + +TL +I KFI ATKE DE SDA DE + EA A+ Sbjct: 713 KEQESDTTASTLGQIAKFISATKEEDEASDADEFYDAAELVDEVTELTEAHPEISTAAAP 772 Query: 727 KKA---------NDSEDLTTNK--------------ETPANAKPQEEAPEDESL------ 757 K A NDS+ + K E N ++E D+SL Sbjct: 773 KHAPPPVPNETDNDSQYVQDEKSKIESNVEKTSQKFEKQNNLVTEDEPKTDQSLKNFKAE 832 Query: 758 -----------------------IVISSPQVEKKNQLLKEGSFVGYEDPVRTKLALDEDN 794 + +++ Q K+ LLKEGS++GYED +R +L++D+D+ Sbjct: 833 DKESQVKEKTKEIASSVIGEKTIVAVTTVQKRKEEYLLKEGSYLGYEDGIRKRLSMDKDD 892 Query: 795 RPKIGLWSVLKSMVGQDLTKLTLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRM 854 RPKI LW+VLKSMVG+D+T++TLPV+FNEPTSLLQRV+ED+EYS +LDQAATFEDS+LR Sbjct: 893 RPKISLWAVLKSMVGKDMTRMTLPVTFNEPTSLLQRVAEDLEYSELLDQAATFEDSTLRT 952 Query: 855 LYVAAFTASMYASTTNRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESP 914 LYVAAFTAS YASTT RV+KPFNPLLGETFEY+R D QYRFFTEQVSHHPPISATWTESP Sbjct: 953 LYVAAFTASSYASTTKRVAKPFNPLLGETFEYSRPDKQYRFFTEQVSHHPPISATWTESP 1012 Query: 915 KWDFYGECNVDSSFNGRTFAVQHLGLWYITIRPDHNISVPEETYSWKKPNNTVIGILMGK 974 +WDF+GE VD+ FNGR+F V+HLGLW+I +RP+ N EE Y+WKKPNNTVIGIL+G Sbjct: 1013 RWDFWGESFVDTKFNGRSFNVKHLGLWHIKLRPNDN--EKEELYTWKKPNNTVIGILIGN 1070 Query: 975 PQVDNSGDVKVTNHTTGDYCMLHYKAHGWTSAGAYEVRGEVFNKDDKKLWVLGGHWNDSI 1034 PQVDN G+V V NHTTGD+C L++KA GW S+GAYE+ GEV+NK +K+W+LGGHWN++I Sbjct: 1071 PQVDNHGEVNVVNHTTGDHCKLYFKARGWRSSGAYEITGEVYNKKKQKVWILGGHWNEAI 1130 Query: 1035 YGKKVTARGGELTLDRIKTANSATGGPKLDGSKFLIWKANERPSVPFNLTSFALTLNALP 1094 + KKV + G+L+L++ +TA SA GP DG+KFLIWKAN+RP PFNLT FA+TLNA Sbjct: 1131 FAKKV-VKDGDLSLEKTRTAASAGNGPTDDGTKFLIWKANDRPEEPFNLTPFAITLNAPQ 1189 Query: 1095 PHLIPYLAPTDSRLRPDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKGEEYRPKWFV 1154 PHL+P+L PTD+RLRPDQRAME+G YD+A EK RVE KQRAA+++RE+ EY P+WFV Sbjct: 1190 PHLLPWLPPTDTRLRPDQRAMEDGRYDEAGDEKFRVEEKQRAARRKREENNLEYHPQWFV 1249 Query: 1155 QEEHPVTKSLYWKFNGEYWNKRKNHDFKDCADIF 1188 ++ HP+TK+ YW++ G+YW KR++HD KDC DIF Sbjct: 1250 RDTHPITKAKYWRYTGKYWVKRRDHDLKDCGDIF 1283 >YAR042W SWH1 SGDID:S0000081, Chr I from 192609-193379 Length = 256 Score = 466 bits (1198), Expect = e-131 Identities = 230/233 (98%), Positives = 230/233 (98%) Query: 1 MEQPDLSSVAISKPLLKLKLLDALRQGSFPNLQDLLKKQFQPLDDPNVQQVLHLMLHYAV 60 MEQPDLSSVAISKPLLKLKLLDALRQGSFPNLQDLLKKQFQPLDDPNVQQVLHLMLHYAV Sbjct: 1 MEQPDLSSVAISKPLLKLKLLDALRQGSFPNLQDLLKKQFQPLDDPNVQQVLHLMLHYAV 60 Query: 61 QVAPMAVIKEIVHHWVSTTNTTFLNIHLDLNERDSNGNTPLHIAAYQSRGDIVAFLLDQP 120 QVAPMAVIKEIVHHWVSTTNTTFLNIHLDLNERDSNGNTPLHIAAYQSRGDIVAFLLDQP Sbjct: 61 QVAPMAVIKEIVHHWVSTTNTTFLNIHLDLNERDSNGNTPLHIAAYQSRGDIVAFLLDQP 120 Query: 121 TINDCVLNNSHLQAIEMCKNLNIAQMMQVKRSTYVAETAQEFRTAFNNRDFGHLESILSS 180 TINDCVLNNSHLQAIEMCKNLNIAQMMQVKRSTYVAETAQEFRTAFNNRDFGHLESILSS Sbjct: 121 TINDCVLNNSHLQAIEMCKNLNIAQMMQVKRSTYVAETAQEFRTAFNNRDFGHLESILSS 180 Query: 181 PRNAELLDINGMDPETGDTVLHEFVKKRDVIMCRWLLEHGADPFKRDRKGKLP 233 PRNAELLDINGMDPETGDTVLHEFVKKRDVIMCRWLLEHGADPFKRDRK P Sbjct: 181 PRNAELLDINGMDPETGDTVLHEFVKKRDVIMCRWLLEHGADPFKRDRKANCP 233 >YHR073W OSH3 SGDID:S0001115, Chr VIII from 242583-245573 Length = 996 Score = 168 bits (426), Expect = 4e-42 Identities = 190/766 (24%), Positives = 322/766 (42%), Gaps = 126/766 (16%) Query: 465 DDDYDDDDESRPLIEPLPLISSRSQSLSEITPGPHSRKSTVSSTRAADIPSDDEGYSEDD 524 DD ++D D S L E ++ + +++ +P H + ++T++A +++ D Sbjct: 315 DDQFEDKDTST-LEENPDILDDDKEVINKSSPQDHDHLTPTATTKSA---LSHRQHTQKD 370 Query: 525 SDDDGNSSYTMENGGENDGDEDLNAIYGPYIQKLHMLQRSIS-IELASLNELLQDKQQHD 583 DD + E+ Y + L ++Q+ + + SL+ Q Sbjct: 371 MDD-----IYVPLPSES---------YATFSMNLRLIQQRLEQCKKDSLSYKPTTLHQRS 416 Query: 584 EYWNTVNTSIET-----VSEFFDKLNRLTSQREKRMIAQMTKQRDVNNVWIQSVKDLEM- 637 E N ++S VS F + +TS + + + + + DLE+ Sbjct: 417 EGLNGTHSSSSVFTNNRVSSFNHSSSGMTSSDSLASEEVPSNKTYIEHALYNQLADLEVF 476 Query: 638 --------ELVDKDEKLVALDKERKNLKKMLQKKLNNQPQVETEANEESDDANSMI-KGS 688 E++ KD +++ K+ K+ + L L+ N+E DA I +G Sbjct: 477 VSRFVTQGEVLFKDHQILC--KKAKDTRVSLTSYLSE--------NDEFFDAEEEISRGV 526 Query: 689 QESTNTLEEIVKFIEATKESDEDSDADEFF-DAEEAASDKKANDS-EDLTTNKETPA--- 743 +T ++I +E T + SD +EF + + + S++ A+ S E TTN E + Sbjct: 527 IILPDTEDDINNIVEETPLLGK-SDQNEFTKEVQLSGSEQIASSSVESYTTNDENHSRKH 585 Query: 744 ----NAKPQEEAPEDESLIVISSPQVEKKNQLLKEGSFVGYEDPVRTKLALDEDNRPKIG 799 + + P + S Q + K+ + Y V + + E Sbjct: 586 LKNRHKNRRRGHPHHQKT---KSAQSSTETFTSKDLFALSYPKSVTRRNDIPEAAASPPS 642 Query: 800 LWSVLKSMVGQDLTKLTLPVSFNEPTSLLQRVSEDIEYSHILDQAATFEDSSLRMLYVAA 859 L S L+ VG+DL+ + +PV+ NEP S+LQ +SE EY+ +L +A D + +V+A Sbjct: 643 LLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETFEYAPLLTKATQRPDP---ITFVSA 699 Query: 860 FTAS---MYASTTNRVSKPFNPLLGETFEYARTDGQYRFFTEQVSHHPPISATWTESPKW 916 F S +Y T + KPFNPLL ETFE R D +R +E+VSH PP+ A + E W Sbjct: 700 FAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDW 759 Query: 917 DFYGECNVDSSFNGRTFAVQHLGLWYITIRPDHNISVPEETYSWKKPNNTVIGILMGKPQ 976 + F G++ + + G+ + + E + W +P + ++ G+ Sbjct: 760 ECSYTVTPSQKFWGKSIELNNEGILRLKFK------TTGELFEWTQPTTILKNLIAGERY 813 Query: 977 VDNSGDVKVTNHTTGDYCMLHYKAH-GWTSAGAYEVRGEVFN-------KDDKKLWVLGG 1028 ++ + +V + + GD K+H + AG + R E F ++K L G Sbjct: 814 MEPVNEFEV-HSSKGD------KSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAG 866 Query: 1029 HWNDSIYGKKVTARGGELTLDRIKTANSATGGPKLDGSKFLIWKANE---RPSVPFNLTS 1085 W S+ AN T IW+ + P + T Sbjct: 867 KWTQSL-------------------ANETT--------HETIWEVGDLVSNPKKKYGFTK 899 Query: 1086 FALTLNALPPHLIPYLAPTDSRLRPDQRAMENGEYDKAAAEKHRVEVKQRAAKKEREQKG 1145 F LN + L PTDSRLRPD RA E G DKA K ++E QR ER KG Sbjct: 900 FTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQR----ERRNKG 955 Query: 1146 EEYRPKWFVQEEHPVTKSLYWKF---NGEYWNKRKNHDFKDCADIF 1188 ++ PK+F V+K+ WK+ YW +RK HD+ D + ++ Sbjct: 956 QDVEPKYF----EKVSKN-EWKYITGPKSYWERRKKHDWSDISQLW 996 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.312 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,188,716 Number of Sequences: 6497 Number of extensions: 433961 Number of successful extensions: 10133 Number of sequences better than 1.0e-30: 4 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 10077 Number of HSP's gapped (non-prelim): 6 length of query: 1188 length of database: 2,996,526 effective HSP length: 101 effective length of query: 1087 effective length of database: 2,340,329 effective search space: 2543937623 effective search space used: 2543937623 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL056W Annotated|01:39260:41902| frame 2; YAL056W/GPB2; Verified; this gene contains 1 exon (880 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL056W KRH1 SGDID:S0000052, Chr I from 39260-41803 1712 0.0 YOR371C KRH2 SGDID:S0005898, Chr XV from 1031482-1034175, revers... 523 e-149 >YAL056W KRH1 SGDID:S0000052, Chr I from 39260-41803 Length = 847 Score = 1712 bits (4433), Expect = 0.0 Identities = 840/844 (99%), Positives = 840/844 (99%) Query: 1 MEISSSPWNDGGYSPYERNRVAVSPFSSALEGEERIETSRSLGDHCFEPLPYVTNYLSIF 60 MEISSSPWNDGGYSPYERNRVAVSPFSSALEGEERIETSRSLGDHCFEPLPYVTNYLSIF Sbjct: 1 MEISSSPWNDGGYSPYERNRVAVSPFSSALEGEERIETSRSLGDHCFEPLPYVTNYLSIF 60 Query: 61 ALFGKEIFGDKGNVSSRNEYLLKKYYSLKKPFVLRHNGHALKNPDMPLQRNDILQTNFMV 120 ALFGKEIFGDKGNVSSRNEYLLKKYYSLKKPFVLRHNGHALKNPDMPLQRNDILQTNFMV Sbjct: 61 ALFGKEIFGDKGNVSSRNEYLLKKYYSLKKPFVLRHNGHALKNPDMPLQRNDILQTNFMV 120 Query: 121 DKFLNRTVRSVNFNNFKIISDMQSKSGRGTKSGTNQNQSADAIQNICLPSIPSALPYFQY 180 DKFLNRTVRSVNFNNFKIISDMQSKSGRGTKSGTNQNQSADAIQNICLPSIPSALPYFQY Sbjct: 121 DKFLNRTVRSVNFNNFKIISDMQSKSGRGTKSGTNQNQSADAIQNICLPSIPSALPYFQY 180 Query: 181 YRKLLTVNTKEWDILKLHSLWVPKLRKDFKDFSLYGDKNSLKPIDSHYDEDNTMKKNLFF 240 YRKLLTVNTKEWDILKLHSLWVPKLRKDFKDFSLYGDKNSLKPIDSHYDEDNTMKKNLFF Sbjct: 181 YRKLLTVNTKEWDILKLHSLWVPKLRKDFKDFSLYGDKNSLKPIDSHYDEDNTMKKNLFF 240 Query: 241 ERSPSRQTLDGKGCASKGYDISSGNMIIPSLFSEDKLPALTYHCSVELNGNIYIFGGLMP 300 ERSPSRQTLDGKGCASKGYDISSGNMIIPSLFSEDKLPALTYHCSVELNGNIYIFGGLMP Sbjct: 241 ERSPSRQTLDGKGCASKGYDISSGNMIIPSLFSEDKLPALTYHCSVELNGNIYIFGGLMP 300 Query: 301 CYSYEEDAPMLNDFFVDGIKNLPPPLLPQVINNPSMVNNPHLYVASIPSCRFSKPKMGGY 360 CYSYEEDAPMLNDFFVDGIKNLPPPLLPQVINNPSMVNNPHLYVASIPSCRFSKPKMGGY Sbjct: 301 CYSYEEDAPMLNDFFVDGIKNLPPPLLPQVINNPSMVNNPHLYVASIPSCRFSKPKMGGY 360 Query: 361 IPPPLLCVQGSKLTDRHIFFYGGFEIRTETRGDENGKYHLKKRLYVNNTGYILDIMSFKF 420 IPPPLLCVQGSKLTDRHIFFYGGFEIRTETRGDENGKYHLKKRLYVNNTGYILDIMSFKF Sbjct: 361 IPPPLLCVQGSKLTDRHIFFYGGFEIRTETRGDENGKYHLKKRLYVNNTGYILDIMSFKF 420 Query: 421 TKIDIIVQPSKYNAYPTMSSRFGHLQISIDNPNRRASVHSSSMNEIHKMGSASMKQGSSI 480 TKIDIIVQPSKYNAYPTMSSRFGHLQISIDNPNRRASVHSSSMNEIHKMGSASMKQGSSI Sbjct: 421 TKIDIIVQPSKYNAYPTMSSRFGHLQISIDNPNRRASVHSSSMNEIHKMGSASMKQGSSI 480 Query: 481 TSGRLEKAAVLSSLPHNTVHTVIIFGGYRQTGDDRYEAMNDLWKIEIPVIRRGKKGYCKF 540 TSGRLEKAAVLSSLPHNTVHTVIIFGGYRQTGDDRYEAMNDLWKIEIPVIRRGKKGYCKF Sbjct: 481 TSGRLEKAAVLSSLPHNTVHTVIIFGGYRQTGDDRYEAMNDLWKIEIPVIRRGKKGYCKF 540 Query: 541 SETANAILLTPSEKDKSDWPEERAFSAFSVHGTSLMDRSSLDMRLLNNLKNHFVLKPSYI 600 SETANAILLTPSEKDKSDWPEERAFSAFSVHGTSLMDRSSLDMRLLNNLKNHFVLKPSYI Sbjct: 541 SETANAILLTPSEKDKSDWPEERAFSAFSVHGTSLMDRSSLDMRLLNNLKNHFVLKPSYI 600 Query: 601 SQDRVVSPKPVFPMMVHGTHQDLFNSGSAAQESPKAGASASSASAASFDPDMDDNLENYI 660 SQDRVVSPKPVFPMMVHGTHQDLFNSGSAAQESPKAGASASSASAASFDPDMDDNLENYI Sbjct: 601 SQDRVVSPKPVFPMMVHGTHQDLFNSGSAAQESPKAGASASSASAASFDPDMDDNLENYI 660 Query: 661 INPGRKSSSIPMTAIGRQRLILSQEKPVGKTVVLHGGSNGLNVLDDMWLMDLECETWTPI 720 INPGRKSSSIPMTAIGRQRLILSQEKPVGKTVVLHGGSNGLNVLDDMWLMDLECETWTPI Sbjct: 661 INPGRKSSSIPMTAIGRQRLILSQEKPVGKTVVLHGGSNGLNVLDDMWLMDLECETWTPI 720 Query: 721 ETFAKADSSEDGDEKLDSVNVGLVGHRMESIGRICVCIGGMVQEDVDQFYSENDDEPPRK 780 ETFAKADSSEDGDEKLDSVNVGLVGHRMESIGRICVCIGGMVQEDVDQFYSENDDEPPRK Sbjct: 721 ETFAKADSSEDGDEKLDSVNVGLVGHRMESIGRICVCIGGMVQEDVDQFYSENDDEPPRK 780 Query: 781 RKVDTLPLGGNFLNTIDLSTQFWEEHKITLSKKAADEDRQDSENEDTNSNIVVGVGGTSL 840 RKVDTLPLGGNFLNTIDLSTQFWEEHKITLSKKAADEDRQDSENEDTNSNIVVGVGGTS Sbjct: 781 RKVDTLPLGGNFLNTIDLSTQFWEEHKITLSKKAADEDRQDSENEDTNSNIVVGVGGTSF 840 Query: 841 QCDK 844 K Sbjct: 841 NVTK 844 >YOR371C KRH2 SGDID:S0005898, Chr XV from 1031482-1034175, reverse complement Length = 897 Score = 523 bits (1347), Expect = e-149 Identities = 318/909 (34%), Positives = 485/909 (53%), Gaps = 131/909 (14%) Query: 47 FEPLPYVTNYLSIFALFGKEIFGDKGNVSSR----NEYLLKKYYSLKKPFVLR--HNGHA 100 ++ L Y++NY+S+F + D N+ SR NE LLKKYY +KPF G Sbjct: 39 YDSLKYISNYVSVF----DQALSD--NIDSRIRKENEALLKKYYESRKPFTFTSFRQGSV 92 Query: 101 LKNPDMPLQRNDILQTNFMVDKFLNRTVRSVNFNNFKIISDMQSKSGRGTKSGTNQNQSA 160 + + D + +T ++ F++ V V+ K+ + + ++ ++ +S Sbjct: 93 ISSSDSSTGFTERTKTYCFLNDFVSNCVNEVDPYTLKM-TVRNRNTALNMENLDDERKSK 151 Query: 161 DAI-----------------------QNICLPSIPSALPYFQYYRKLLTVNTKEWDILKL 197 D I + + + S + YF+YY+KLLTV+ ++ D+LK Sbjct: 152 DDIYDFEDNTDDECNAKCHGAFHYSSERLEILRSRSTISYFKYYKKLLTVDLRDSDVLKR 211 Query: 198 HSLWVPKLRKDFKDFSLYGDKNS----LKPIDSHYDEDNTMKKNLFFERSPSRQTLDGKG 253 H+LW+P + + F+ + K PI + + D + KN ++G Sbjct: 212 HNLWMPMITRRFRFLLVSSSKPEDVRLTTPIPTFSESDLDIFKN-----KTCPLFINGTD 266 Query: 254 CASKGYDISSGNMIIPSLFSEDKLPALTYHCSVELNGNIYIFGGLMPCYSYEEDAPMLND 313 C + YD SG+ +I S+FSE KLP+L+YHCSVELN ++I GGLM C+ Y+E+AP L D Sbjct: 267 CVPRSYDTFSGSSVIASIFSEYKLPSLSYHCSVELNDQLFIVGGLMACHRYDEEAPDLKD 326 Query: 314 FFVDGIKNLPPPLLPQVINNPSMVNNPHLYVASIPSCRFSKPKMGGYIPPPLLCVQGSKL 373 F+VDGIKNLPPPL+P++INNPSM+ NPHLY S+ S R ++P + GYIPPPL+C QG KL Sbjct: 327 FYVDGIKNLPPPLIPELINNPSMIPNPHLYCFSLTSSRLTRPDISGYIPPPLVCTQGCKL 386 Query: 374 TDRHIFFYGGFEIRTETRGDENGKYHLKKRLYVNNTGYILDIMSFKFTKIDIIVQPSKYN 433 T+RHIF YGGFEI++ET+ D+ G+Y ++KR ++NNTGYILD ++F F+KI+++ P ++ Sbjct: 387 TERHIFLYGGFEIKSETQVDDKGRYFIRKRAFLNNTGYILDTVTFNFSKIELVAPPYQFA 446 Query: 434 AYPTMSSRFGHLQISIDNPNRRASVHSSSMNEIHKMGSASMKQG-----------SSITS 482 Y S RFGH+Q SI N N S +++ + + + +QG S ++ Sbjct: 447 IYNNFSPRFGHMQASISNSNNNVSNENTTTSAKGRRSISPYRQGNGDHKIDDLVGSPGST 506 Query: 483 GRLEKAAV----------------LSSLPH--NTVHTVIIFGGYRQTGDDRYEAMNDLWK 524 LE A+ S+ H ++V+T++IFGGY QTGDD+YEAMND+WK Sbjct: 507 DYLEDDAIPPVTNPRSTDSLSSKHCSTATHICSSVNTILIFGGYSQTGDDKYEAMNDMWK 566 Query: 525 IEIPVIRRGKKGYCKFSETANAILLTPSEKDKSDWPEERAFSAFSVHGTSLMDRSSLDMR 584 I IPV+ RGK+ Y KF++T A + P D WP RAFSA V D ++ R Sbjct: 567 INIPVVSRGKRNYYKFADTVTATKI-PIIDDPELWPSRRAFSACCVPDYFTKDVEPIETR 625 Query: 585 LLNNLKNHFVLKPSYISQDRVVSP-----KPVFPMMVHGTHQ--------DLFNSGSAAQ 631 LL NLKN F S D + P +P+FP + H + + NS ++ Sbjct: 626 LLRNLKNDF-------SIDLEIRPGNKPSQPLFPNIPHSRKEKKSGRDSMHISNSNNSTS 678 Query: 632 ESPKAGASASSASAASFDPDMDDNLENYIINPGRKSSSIPMTAIGRQRLILSQEKPVGKT 691 E + ++ ++ S+ P L NP +K +SI G+T Sbjct: 679 EDTSSKSTRNTTSSPPTSPKHTPPL-----NPSKKCASI------------------GRT 715 Query: 692 VVLHGGSNGLNVLDDMWLMDLECETWTPIETFAKADSSEDGDEKLDSVNVGLVGHRMESI 751 + HGGS+G +V DMW D + ETWT I+ +AK DG L +N+ +VGH M ++ Sbjct: 716 IAFHGGSDGYDVCSDMWWFDFDSETWTKIDLYAKTQEESDG---LVPINLCMVGHSMTTV 772 Query: 752 GRICVCIGGMVQEDVDQFYSENDDEPPRKRKVDTLPLGGNFLNTIDLSTQFWEEHKITLS 811 G V IGG+ Q DVD+ Y DE + + +PLG +N +DL+TQ + K+ + Sbjct: 773 GHKVVLIGGLRQGDVDRIYR---DETLPEEVISGVPLGSGVINVVDLNTQCLQGCKLIRN 829 Query: 812 KKAADEDRQDSENEDTN---SNIVVGVGGTSLQCDKSIILIGGLISRRSNVKEIYLHGTI 868 D D ++S D + + V+ V GT ++ LIGG+++ R ++ +YL G + Sbjct: 830 ----DGDTKESVIMDPHVGTPHQVLAVAGTIELVKGTMTLIGGVVAGREDISSLYLRGAV 885 Query: 869 TKSIFPSVN 877 + I PS+N Sbjct: 886 LQFILPSMN 894 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.316 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,816,337 Number of Sequences: 6497 Number of extensions: 284543 Number of successful extensions: 916 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 904 Number of HSP's gapped (non-prelim): 4 length of query: 880 length of database: 2,996,526 effective HSP length: 99 effective length of query: 781 effective length of database: 2,353,323 effective search space: 1837945263 effective search space used: 1837945263 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL002W Annotated|01:143709:147533| frame 3; YAL002W/VPS8; Verified; this gene contains 1 exon (1274 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL002W VPS8 SGDID:S0000002, Chr I from 143998-147528 2338 0.0 >YAL002W VPS8 SGDID:S0000002, Chr I from 143998-147528 Length = 1176 Score = 2338 bits (6058), Expect = 0.0 Identities = 1176/1176 (100%), Positives = 1176/1176 (100%) Query: 99 MGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNIC 158 MGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNIC Sbjct: 1 MGTSKGCVLIFNYNEHLQTILVPTLSEDPSIHSIRSPVKSIVICSDGTHVAASYETGNIC 60 Query: 159 IWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTG 218 IWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTG Sbjct: 61 IWNLNVGYRVKPTSEPTNGMTPTPALPAVLHIDDHVNKEITGLDFFGARHTALIVSDRTG 120 Query: 219 KVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFA 278 KVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFA Sbjct: 121 KVSLYNGYRRGFWQLVYNSKKILDVNSSKEKLIRSKLSPLISREKISTNLLSVLTTTHFA 180 Query: 279 LILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQ 338 LILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQ Sbjct: 181 LILLSPHVSLMFQETVEPSVQNSLVVNSSISWTQNCSRVAYSVNNKISVISISSSDFNVQ 240 Query: 339 SASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNK 398 SASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNK Sbjct: 241 SASHSPEFAESILSIQWIDQLLLGVLTISHQFLVLHPQHDFKILLRLDFLIHDLMIPPNK 300 Query: 399 YFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLK 458 YFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLK Sbjct: 301 YFVISRRSFYLLTNYSFKIGKFVSWSDITLRHILKGDYLGALEFIESLLQPYCPLANLLK 360 Query: 459 LDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIP 518 LDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIP Sbjct: 361 LDNNTEERTKQLMEPFYNLSLAALRFLIKKDNADYNRVYQLLMVVVRVLQQSSKKLDSIP 420 Query: 519 SLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIED 578 SLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIED Sbjct: 421 SLDVFLEQGLEFFELKDNAVYFEVVANIVAQGSVTSISPVLFRSIIDYYAKEENLKVIED 480 Query: 579 LIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIF 638 LIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIF Sbjct: 481 LIIMLNPTTLDVDLAVKLCQKYNLFDLLIYIWNKIFDDYQTPVVDLIYRISNQSEKCVIF 540 Query: 639 NGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSN 698 NGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSN Sbjct: 541 NGPQVPPETTIFDYVTYILTGRQYPQNLSISPSDKCSKIQRELSAFIFSGFSIKWPSNSN 600 Query: 699 HKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSR 758 HKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSR Sbjct: 601 HKLYICENPEEEPAFPYFHLLLKSNPSRFLAMLNEVFEASLFNDDNDMVASVGEAELVSR 660 Query: 759 QYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQG 818 QYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQG Sbjct: 661 QYVIDLLLDAMKDTGNSDNIRVLVAIFIATSISKYPQFIKVSNQALDCVVNTICSSRVQG 720 Query: 819 IYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDI 878 IYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDI Sbjct: 721 IYEISQIALESLLPYYHSRTTENFILELKEKNFNKVLFHIYKSENKYASALSLILETKDI 780 Query: 879 EKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNL 938 EKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNL Sbjct: 781 EKEYNTDIVSITDYILKKCPPGSLECGKVTEVIETNFDLLLSRIGIEKCVTIFSDFDYNL 840 Query: 939 HQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVL 998 HQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVL Sbjct: 841 HQEILEVKNEETQQKYLDKLFSTPNINNKVDKRLRNLHIELNCKYKSKREMILWLNGTVL 900 Query: 999 SNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESL 1058 SNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESL Sbjct: 901 SNAESLQILDLLNQDSNFEAAAIIHERLESFNLAVRDLLSFIEQCLNEGKTNISTLLESL 960 Query: 1059 RRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSS 1118 RRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSS Sbjct: 961 RRAFDDCNSAGTEKKSCWILLITFLITLYGKYPSHDERKDLCNKLLQEAFLGLVRSKSSS 1020 Query: 1119 QKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQD 1178 QKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQD Sbjct: 1021 QKDSGGEFWEIMSSVLEHQDVILMKVQDLKQLLLNVFNTYKLERSLSELIQKIIEDSSQD 1080 Query: 1179 LVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVI 1238 LVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVI Sbjct: 1081 LVQQYRKFLSEGWSIHTDDCEICGKKIWGAGLDPLLFLAWENVQRHQDMISVDLKTPLVI 1140 Query: 1239 FKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV 1274 FKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV Sbjct: 1141 FKCHHGFHQTCLENLAQKPDEYSCLICQTESNPKIV 1176 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.136 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,876,795 Number of Sequences: 6497 Number of extensions: 361365 Number of successful extensions: 1261 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1258 Number of HSP's gapped (non-prelim): 1 length of query: 1274 length of database: 2,996,526 effective HSP length: 102 effective length of query: 1172 effective length of database: 2,333,832 effective search space: 2735251104 effective search space used: 2735251104 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 329 (131.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL023C Annotated|01:108552:106273| frame 4; YAL023C/PMT2; Verified; this gene contains 1 exon (759 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL023C PMT2 SGDID:S0000021, Chr I from 106274-108550, reverse c... 1570 0.0 YOR321W PMT3 SGDID:S0005848, Chr XV from 916022-918283 1048 0.0 YGR199W PMT6 SGDID:S0003431, Chr VII from 897497-899776 695 0.0 YDL095W PMT1 SGDID:S0002253, Chr IV from 287058-289511 372 e-103 YDL093W PMT5 SGDID:S0002251, Chr IV from 289908-292139 321 2e-88 YJR143C PMT4 SGDID:S0003904, Chr X from 698019-700307, reverse c... 292 1e-79 >YAL023C PMT2 SGDID:S0000021, Chr I from 106274-108550, reverse complement Length = 758 Score = 1570 bits (4065), Expect = 0.0 Identities = 756/759 (99%), Positives = 756/759 (99%), Gaps = 1/759 (0%) Query: 1 MSSSSSTGYSKNNAAHIKQENTLRQRESSSISVSEELSSADERDAEDFSKEKPAAQSSLL 60 MSSSSSTGYSKNNAAHIKQENTLRQRESSSISVSEELSSADERDAEDFSKEKPAAQSSLL Sbjct: 1 MSSSSSTGYSKNNAAHIKQENTLRQRESSSISVSEELSSADERDAEDFSKEKPAAQSSLL 60 Query: 61 RLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKML 120 RLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKML Sbjct: 61 RLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKML 120 Query: 121 VGLSGYLAGYNGSWDFPSGEIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTV 180 VGLSGYLAGYNGSWDF EIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTV Sbjct: 121 VGLSGYLAGYNGSWDFLL-EIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTV 179 Query: 181 WLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITG 240 WLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITG Sbjct: 180 WLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITG 239 Query: 241 ISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFCI 300 ISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFCI Sbjct: 240 ISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFCI 299 Query: 301 FLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGSL 360 FLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGSL Sbjct: 300 FLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGSL 359 Query: 361 LHSHIQTYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSYRLVH 420 LHSHIQTYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSYRLVH Sbjct: 360 LHSHIQTYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSYRLVH 419 Query: 421 KSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQRGDEDPEKLHTLTTS 480 KSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQRGDEDPEKLHTLTTS Sbjct: 420 KSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQRGDEDPEKLHTLTTS 479 Query: 481 FRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPED 540 FRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPED Sbjct: 480 FRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPED 539 Query: 541 FQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNP 600 FQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNP Sbjct: 540 FQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNP 599 Query: 601 KYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWG 660 KYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWG Sbjct: 600 KYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWG 659 Query: 661 LHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGRIMRFVLYAGFMAL 720 LHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGRIMRFVLYAGFMAL Sbjct: 660 LHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGRIMRFVLYAGFMAL 719 Query: 721 VIGCFWYFSPISFGMEGPSSNFRYLNWFSTWDIADKQEA 759 VIGCFWYFSPISFGMEGPSSNFRYLNWFSTWDIADKQEA Sbjct: 720 VIGCFWYFSPISFGMEGPSSNFRYLNWFSTWDIADKQEA 758 >YOR321W PMT3 SGDID:S0005848, Chr XV from 916022-918283 Length = 753 Score = 1048 bits (2710), Expect = 0.0 Identities = 487/727 (66%), Positives = 591/727 (81%), Gaps = 7/727 (0%) Query: 33 VSEELSSAD---ERDAEDFSKEKPAAQSSLLRLESVVMPVIFTALALFTRMYKIGINNHV 89 V EEL AD + DAE + K K +S++ L+++VMP+IFT L +FTRMYKIG NNHV Sbjct: 25 VKEELEDADNFLKDDAELYDKVKN--ESAVSHLDTIVMPIIFTVLGMFTRMYKIGRNNHV 82 Query: 90 VWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFPSGEIYPDYLDYV 149 VWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFPSGE+YPDY+DYV Sbjct: 83 VWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFPSGEVYPDYIDYV 142 Query: 150 KMRLFNASFSALCVPLAYFTAKAIGFSLPTVWLMTVLVLFENSYSTLGRFILLDSMLLFF 209 KMRLF A FS+LCVPLAYFT +AIGFS +VWL T+LV+FENSY+TLG+FILLDSMLLFF Sbjct: 143 KMRLFQAMFSSLCVPLAYFTGRAIGFSRLSVWLFTILVIFENSYATLGKFILLDSMLLFF 202 Query: 210 TVASFFSFVMFHNQRSKPFSRKWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLW 269 TV+S+F FH R PFS +WW WL +TG++LGC ISVKMVGLFII++VGIYT+ +LW Sbjct: 203 TVSSYFCLAKFHTMRKSPFSARWWLWLCLTGLNLGCAISVKMVGLFIISVVGIYTISELW 262 Query: 270 TFLADKSMSWKTYINHWLARIFGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMPSLFQAR 329 L+D+S+SWK Y+NHWLARIFGLII+P C+FLLCFKIHFDLLS+SG GD+ MPSLFQA Sbjct: 263 NLLSDRSVSWKVYVNHWLARIFGLIIIPVCVFLLCFKIHFDLLSNSGPGDSTMPSLFQAS 322 Query: 330 LVGSDVGQGPRDIALGSSVVSIKNQALGGSLLHSHIQTYPDGSNQQQVTCYGYKDANNEW 389 L G+ VG+GPRD+ALGSS++SIKNQALGG+LLHSH+Q +P+GS QQQVT YGY DANNEW Sbjct: 323 LNGTKVGKGPRDVALGSSIISIKNQALGGALLHSHVQPFPEGSEQQQVTVYGYSDANNEW 382 Query: 390 FFNRERGLPSWSENET-DIEYLKPGTSYRLVHKSTGRNLHTHPVAAPVSKTQWEVSGYGD 448 FF R RG+ W++ E IE++K G YRL+H+ TG+NLHTH V AP+SK+++EVS YGD Sbjct: 383 FFQRIRGVEPWTDAENKTIEFVKGGEMYRLMHRLTGKNLHTHEVPAPISKSEYEVSAYGD 442 Query: 449 NVVGDNKDNWVIEIMDQRGDEDPEKLHTLTTSFRIKNLEMGCYLAQTGNSLPEWGFRQQE 508 +GD KDNW+IEI++Q G+EDP LH L+TSFRIKN +GCYLAQ+G LPEWGFRQ E Sbjct: 443 VDLGDYKDNWIIEIVEQVGEEDPTLLHPLSTSFRIKNSILGCYLAQSGKHLPEWGFRQGE 502 Query: 509 VVCMKNPFKRDKRTWWNIETHENERLPPRPEDFQYPKTNFLKDFIHLNLAMMATNNALVP 568 VVC+K+ KRDKRTWWNIETHENERL P+ EDF YPKT+F ++F+ LN AMMATNNALVP Sbjct: 503 VVCLKHASKRDKRTWWNIETHENERL-PQGEDFVYPKTSFFRNFMQLNSAMMATNNALVP 561 Query: 569 DPDKFDYLASSAWQWPTLNVGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVIL 628 +P+KFD +ASSAWQWPTLNVG+RLC W + + KYFLLG+PAS W SS+AV A + V+ L Sbjct: 562 NPEKFDGIASSAWQWPTLNVGVRLCEWSEKSIKYFLLGSPASVWPSSIAVCALIIHVIFL 621 Query: 629 LIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFALII 688 ++WQRQ V L +P +VF+M FYPLLAW LHYMPFV+MSRV Y HHYLP LYFAL+I Sbjct: 622 TLKWQRQCVILSDPVERDVFVMAAFYPLLAWLLHYMPFVVMSRVVYAHHYLPTLYFALMI 681 Query: 689 LAYCFDAGLQKWSRSKCGRIMRFVLYAGFMALVIGCFWYFSPISFGMEGPSSNFRYLNWF 748 L+Y FD ++W+ G+ +R Y + ++VI F+YFSP SFGM+GP ++ YL W Sbjct: 682 LSYYFDMITKRWATRNTGKFLRLGAYIVYGSIVIAGFFYFSPFSFGMDGPVDDYAYLAWL 741 Query: 749 STWDIAD 755 TW I + Sbjct: 742 PTWQIVE 748 >YGR199W PMT6 SGDID:S0003431, Chr VII from 897497-899776 Length = 759 Score = 695 bits (1793), Expect = 0.0 Identities = 344/770 (44%), Positives = 493/770 (64%), Gaps = 28/770 (3%) Query: 1 MSSSSSTGYSKNNAAHIK-QENTLRQRESSSISVSEELSSADERDAEDFSKEKPAAQSSL 59 MS + TG+S + +E + Q ++++ + +E E+ E +K ++L Sbjct: 1 MSKAKGTGFSSIDTEDENLRERYVNQPKANASDIQDEQLDCFEQLEEKHRTKKNEEYTAL 60 Query: 60 LRLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKM 119 L V+ P++ T + + R I NN+VVWDEAHFGKFGSYY++HE+YHDVHPPLGKM Sbjct: 61 KILRDVIGPLLLTITSFYLRFQHIDQNNYVVWDEAHFGKFGSYYIKHEYYHDVHPPLGKM 120 Query: 120 LVGLSGYLAGYNGSWDFPSGEIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPT 179 L+ LS ++AG++G +DF S YP+ +++ MR FNA+F ALC P+A+FTAK +GF+ T Sbjct: 121 LIALSEWMAGFDGQFDFSSNNAYPENVNFKLMRQFNATFGALCTPVAFFTAKWMGFNYFT 180 Query: 180 VWLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLIT 239 V+L+ +V E+SY L +FILLDSMLLFF++ +F + + R + ++KW W+L+T Sbjct: 181 VYLIATMVTLEHSYIVLSKFILLDSMLLFFSMTTFACMIKLYTLRKQQMTKKWSLWMLLT 240 Query: 240 GISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFC 299 G+S+GC SVK VGLFI +VG+YT I+L+ DK + Y HWL RI LI++PF Sbjct: 241 GLSIGCVCSVKWVGLFITVVVGLYTCIELFLLYCDKELPRIKYYKHWLIRIINLIVIPFL 300 Query: 300 IFLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGS 359 I+L CFKIHF LL SGTGD+ +LFQ L G+ + GPRD+A GS ++I++ L + Sbjct: 301 IYLYCFKIHFVLLYKSGTGDSTTNTLFQINLEGTQIEAGPRDVAFGSE-LTIRSHGLSPN 359 Query: 360 LLHSHIQTYPDGSNQQQVTCYGYKDANNEW--FFNRERGLPSWSENET---DIEYLKPGT 414 LLHSHIQ YP+GS Q+Q+T YG+ D+NN W F+R GL +N T I + G Sbjct: 360 LLHSHIQVYPEGSGQRQITGYGFADSNNVWKFEFSRSSGL-ELDQNGTLNGKIIPITDGV 418 Query: 415 SYRLVHKSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQR-------G 467 RL HK+TG NLH+H V + VS+ +EVSGYG VGD KD+W++EI+ Q Sbjct: 419 EVRLSHKNTGSNLHSHDVPSHVSRGNYEVSGYGSQSVGDEKDDWIVEIVKQMDSPNPVYS 478 Query: 468 DEDPEKLHTLTTSFRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIE 527 +E+ LH ++T FR+++ +GCYLA TG + P WGF+Q E+VC + +RDK TWWN+E Sbjct: 479 NENSTILHPVSTFFRLRHKVLGCYLASTGLTYPAWGFKQAEIVCKDSWSRRDKSTWWNVE 538 Query: 528 THENERLPPRPEDFQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLN 587 H N L ED+ PK+NF DFI N AM ++NNALVPD DK+D L+S AW+WPTL+ Sbjct: 539 DHWNHNL-ETAEDYVPPKSNFWTDFILTNFAMASSNNALVPDEDKYDSLSSDAWEWPTLH 597 Query: 588 VGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNV 647 GLR+C W +Y+L+G+P +TW S+V+++ F ++ +L RW+RQ + L + W + Sbjct: 598 KGLRMCSWAGYITRYYLMGSPFNTWISTVSLIIFPFIILFILYRWRRQTLYLSDDQIWQI 657 Query: 648 FLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGR 707 + G +P ++W HY+PF +M RVTYVHHY+PALYFA+++ + D L R Sbjct: 658 TIQ-GIFPFISWMTHYLPFAMMGRVTYVHHYVPALYFAMLVFGFVLDFTLT--------R 708 Query: 708 IMRFVLYAGFMALVIGCFW---YFSPISFGMEGPSSNFRYLNWFSTWDIA 754 + V Y +++L GC + F+PI GM G + + L W STWDIA Sbjct: 709 VHWMVKYPIYLSLFGGCIYIYNLFAPICQGMHGDKAEYLPLQWLSTWDIA 758 >YDL095W PMT1 SGDID:S0002253, Chr IV from 287058-289511 Length = 817 Score = 372 bits (955), Expect = e-103 Identities = 246/713 (34%), Positives = 363/713 (50%), Gaps = 31/713 (4%) Query: 53 PAAQSSLLR-LESVVMPVIFTALALFT---RMYKIGINNHVVWDEAHFGKFGSYYLRHEF 108 P+A+ + LR + ++ ++ LA+FT R++ + + VV+DE HFG F S Y+R + Sbjct: 34 PSAELASLRTMVTLKEKLLVACLAVFTAVIRLHGLAWPDSVVFDEVHFGGFASQYIRGTY 93 Query: 109 YHDVHPPLGKMLVGLSGYLAGYNGSWDFPS-GEIYPDYLDYVKMRLFNASFSALCVPLAY 167 + DVHPPL KML L G+ G +DF + G+ +P YV MR F+AS AL V L Y Sbjct: 94 FMDVHPPLAKMLYAGVASLGGFQGDFDFENIGDSFPSTTPYVLMRFFSASLGALTVILMY 153 Query: 168 FTAKAIGFSLPTVWLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKP 227 T + G + + + ENSY T+ R+ILLD+ L+FF A+ +SF + + Sbjct: 154 MTLRYSGVRMWVALMSAICFAVENSYVTISRYILLDAPLMFFIAAAVYSFKKYEMYPANS 213 Query: 228 FSRKWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWL 287 + +K LL TGI+LG S K VGLF +T VG+ + LW + D + S K+ Sbjct: 214 LNA--YKSLLATGIALGMASSSKWVGLFTVTWVGLLCIWRLWFMIGDLTKSSKSIFKVAF 271 Query: 288 ARIFGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQG-PRDIALGS 346 A++ L+ VPF ++L+ F IHF L+ G G + F++ L + + Q D+ +G Sbjct: 272 AKLAFLLGVPFALYLVFFYIHFQSLTLDGDGASFFSPEFRSTLKNNKIPQNVVADVGIG- 330 Query: 347 SVVSIKNQALGGSLLHSHIQTYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETD 406 S++S+++ + G LHSH YP GS QQQ T Y + DANN+W + E+ T Sbjct: 331 SIISLRHLSTMGGYLHSHSHNYPAGSEQQQSTLYPHMDANNDWLLELYN---APGESLTT 387 Query: 407 IEYLKPGTSYRLVHKSTGRNLHTHPVAAPVSKT---QWEVSGYG-DNVVGDNKDNWVIEI 462 + L GT RL H T LH+H PVS++ Q EVS YG GD D+WV+EI Sbjct: 388 FQNLTDGTKVRLFHTVTRCRLHSHDHKPPVSESSDWQKEVSCYGYSGFDGDANDDWVVEI 447 Query: 463 MDQRGDED---PEKLHTLTTSFRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRD 519 D++ E++ L T FR+++ GCYL LP WGF QQEV C + R Sbjct: 448 -DKKNSAPGVAQERVIALDTKFRLRHAMTGCYLFSHEVKLPAWGFEQQEVTCASS--GRH 504 Query: 520 KRTWWNIETHENERLPPRPEDFQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASS 579 T W +E + N LP + Y +F+ FI + M N LV +P ++ S Sbjct: 505 DLTLWYVENNSNPLLPEDTKRISYKPASFISKFIESHKKMWHINKNLV-EPHVYE---SQ 560 Query: 580 AWQWPTLNVGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDL 639 WP L G+ WG++N +LLG WA + + F V+ L WQ L Sbjct: 561 PTSWPFLLRGISY--WGENNRNVYLLGNAIVWWAVTAFIGIFGLIVITELFSWQLGKPIL 618 Query: 640 RNPSNWNVFLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQK 699 ++ N F + + LL + +HY P +M R ++HHYLPA YF ++ L + D + Sbjct: 619 KDSKVVN-FHVQVIHYLLGFAVHYAPSFLMQRQMFLHHYLPAYYFGILALGHALDIIVSY 677 Query: 700 WSRSKCGRIMRFVLYAGFMALVIGCFWYFSPISFGMEGPSSNFRYLNWFSTWD 752 RSK R M + + F+A + F FSPI +G + W S WD Sbjct: 678 VFRSK--RQMGYAVVITFLAASVYFFKSFSPIIYGTPWTQELCQKSQWLSGWD 728 >YDL093W PMT5 SGDID:S0002251, Chr IV from 289908-292139 Length = 743 Score = 321 bits (823), Expect = 2e-88 Identities = 218/695 (31%), Positives = 338/695 (48%), Gaps = 34/695 (4%) Query: 69 VIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLA 128 +IFTA+ R++ I + N VV+ E G F S Y+ + F+ DVHPPL ML + Sbjct: 53 LIFTAIV---RLHNISLPNSVVFGENEVGTFVSQYVNNIFFTDVHPPLVAMLYATVSSVF 109 Query: 129 GYNGSWDFPS-GEIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTVWLMTVLV 187 GY G +++ + G Y + YV MR F+A+ + V + Y T + G + + V Sbjct: 110 GYKGLFNYGNIGTEYTANVPYVAMRFFSATLGIVSVLVLYLTLRVSGVKIAVAAICAVCF 169 Query: 188 LFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITGISLGCTI 247 ENS+ TL RF L++ +FF + + F ++ P S K K LL I+LG + Sbjct: 170 AIENSFVTLSRFTLIEGPFVFFMACAVYFFR--RSELYLPNSCKANKSLLAASIALGFAV 227 Query: 248 SVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFCIFLLCFKI 307 S K GLF I GI + +W + D S + I + + L+ +P I+ L F + Sbjct: 228 SSKWAGLFTIAWAGIIVLWRVWFMIGDLSRPIGSSIKYMAFQFTCLLAIPAFIYFLIFSV 287 Query: 308 HFDLLSHSGTGDANMPSLFQARLVGSDV-GQGPRDIALGSSVVSIKNQALGGSLLHSHIQ 366 H L+ +G + P+ F+ L ++V + ++A+GS+ VS+ + G LHSH+ Sbjct: 288 HIKTLNVNGISSSFFPAEFRKTLKYNNVIKETVAEVAVGSA-VSLNHVGTAGGYLHSHLH 346 Query: 367 TYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSYRLVHKSTGRN 426 YP GS QQQVT Y + D NN+W +EN T + L GT +L G Sbjct: 347 NYPAGSMQQQVTLYPHIDQNNKWIIELAE---HPNENVTSFQNLTDGTIIKLRQLKNGCR 403 Query: 427 LHTHPVAAPVSKT---QWEVSGYG-DNVVGDNKDNWVIEIMDQRGDEDP--EKLHTLTTS 480 LH+H PVS+ Q EVS YG + GD D+W+IEI +R + P E + + T Sbjct: 404 LHSHDHKPPVSQNADWQKEVSCYGYEGFEGDINDDWIIEIDKKRSEPGPAQEHIRAIETK 463 Query: 481 FRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPED 540 FR+K+ GCYL LPEWGF QQEV C F R+ T W IE +ENE P PE Sbjct: 464 FRLKHYLTGCYLFSHPEKLPEWGFGQQEVTCAY--FAREDLTSWYIEENENEISLPNPEK 521 Query: 541 FQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNP 600 Y K +F + F+ ++ M NN + D +S WP + G+ W ++ Sbjct: 522 VSYKKMSFWQKFVAIHKFMFYLNNYM----DTSHAYSSEPKTWPLMLRGIDF--WNENGR 575 Query: 601 KYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWG 660 + + LG W+ + + F+ V + L+ W+ LR+ N F F LL + Sbjct: 576 EVYFLGNAVLWWSVTAFICTFIIGVAVELLAWKLGVNILRDKHIIN-FHYQVFQYLLGFA 634 Query: 661 LHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGRIMRFVLYAGFMAL 720 HY P+ + + +++ YLPA YF ++ + D + + +K +++ A FM + Sbjct: 635 AHYFPYFFVGQKLFLYDYLPAYYFGILAFGHALDL-ISTYISNKRNN-TGYIVVAIFMVV 692 Query: 721 VIGCFWYF---SPISFGMEGPSSNFRYLNWFSTWD 752 CF++F SP+ + S+ + W +WD Sbjct: 693 ---CFYFFSEHSPLIYATGWSSNLCKRSKWLGSWD 724 >YJR143C PMT4 SGDID:S0003904, Chr X from 698019-700307, reverse complement Length = 762 Score = 292 bits (748), Expect = 1e-79 Identities = 213/704 (30%), Positives = 334/704 (47%), Gaps = 61/704 (8%) Query: 70 IFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAG 129 I T LA R YKI VV+DE HFGKF SYYL ++ DVHPP KM++ G+L G Sbjct: 58 IVTLLAFAARFYKIWYPKEVVFDEVHFGKFASYYLERSYFFDVHPPFAKMMIAFIGWLCG 117 Query: 130 YNGSWDFP----SGEIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTVWLMTV 185 Y+GS+ F S E +P Y+ R FNA L VP+ + T K + F T ++ Sbjct: 118 YDGSFKFDEIGYSYETHP--APYIAYRSFNAILGTLTVPIMFNTLKELNFRAITCAFASL 175 Query: 186 LVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHN-QRSKPFSRKWWKWLLITGISLG 244 LV + ++ T R ILLD++L+ A+ + +V F+ Q +PF+ W+ WL TG+SL Sbjct: 176 LVAIDTAHVTETRLILLDAILIISIAATMYCYVRFYKCQLRQPFTWSWYIWLHATGLSLS 235 Query: 245 CTISVKMVGLFIITMVGIYTVIDLWTFLADKS-MSWKTYINHWLARIFGLIIVPFCIFLL 303 IS K VG+ + +G V++LW L K+ +S + ++ H+ R+ GL+++PF I+L Sbjct: 236 FVISTKYVGVMTYSAIGFAAVVNLWQLLDIKAGLSLRQFMRHFSKRLNGLVLIPFVIYLF 295 Query: 304 CFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGSLLHS 363 F +HF +L+ SG GDA M + FQ L S + + + +++IK+Q + LHS Sbjct: 296 WFWVHFTVLNTSGPGDAFMSAEFQETLKDSPLSVDSKTVNY-FDIITIKHQDT-DAFLHS 353 Query: 364 HIQTYP----DG---SNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSY 416 H+ YP DG S QQVT Y + D NN+W LP + + + Sbjct: 354 HLARYPQRYEDGRISSAGQQVTGYTHPDFNNQW-----EVLPPHGSDVGKGQAVLLNQHI 408 Query: 417 RLVHKSTGRNLHTHPVAAPVSKTQWEVSGY----GDNVVGDNKDNWVIEIMDQRGDEDPE 472 RL H +T L H VA+P T E++ GD G+ + + ++ Sbjct: 409 RLRHVATDTYLLAHDVASPFYPTNEEITTVTLEEGD---GELYPETLFAFQPLKKSDEGH 465 Query: 473 KLHTLTTSFRIKNLEMGCYL-AQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHEN 531 L + T SFR+ +++ L LP+WGF+QQE+ K D W ++ N Sbjct: 466 VLKSKTVSFRLFHVDTSVALWTHNDELLPDWGFQQQEINGNKKVI--DPSNNWVVDEIVN 523 Query: 532 ERLPPRPEDFQYPKT----NFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLN 587 PK FLK +I +M NN L + AS + WP Sbjct: 524 ---LDEVRKVYIPKVVKPLPFLKKWIETQKSMFEHNNKLSSEHP----FASEPYSWPGSL 576 Query: 588 VGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNV 647 G+ GD+ + + +G W +++ F+ +V LI R Y L + + Sbjct: 577 SGVSFWTNGDEKKQIYFIGNIIGWWFQVISLAVFVGIIVADLITRHRGYYALNKMTREKL 636 Query: 648 FLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFAL--------IILAYCFDAGLQK 699 + F+ ++W HY PF +M+R ++HHYLPA A +I + C L+K Sbjct: 637 YGPLMFF-FVSWCCHYFPFFLMARQKFLHHYLPAHLIACLFSGALWEVIFSDCKSLDLEK 695 Query: 700 --------WSRSKCGRIMRFVLYAGFMALVIGCFW-YFSPISFG 734 + R+ + + ++ ++ + F+ YFSP+ +G Sbjct: 696 DEDISGASYERNPKVYVKPYTVFLVCVSCAVAWFFVYFSPLVYG 739 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.324 0.138 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,882,991 Number of Sequences: 6497 Number of extensions: 224948 Number of successful extensions: 676 Number of sequences better than 1.0e-30: 6 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 626 Number of HSP's gapped (non-prelim): 7 length of query: 759 length of database: 2,996,526 effective HSP length: 98 effective length of query: 661 effective length of database: 2,359,820 effective search space: 1559841020 effective search space used: 1559841020 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAR014C Annotated|01:168866:166743| frame 5; YAR014C/BUD14; Verified; this gene contains 1 exon (707 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAR014C BUD14 SGDID:S0000069, Chr I from 166754-168862, reverse ... 1405 0.0 >YAR014C BUD14 SGDID:S0000069, Chr I from 166754-168862, reverse complement Length = 702 Score = 1405 bits (3638), Expect = 0.0 Identities = 699/701 (99%), Positives = 700/701 (99%) Query: 1 MSNKEEHVDETSASGVKEVSSIAARHDNGYAPSLITSTSGMDSFQSHALLNDPTLIEDYS 60 MSNKEEHVDETSASGVKEVSSIAARHDNGYAPSLITSTSGMDSFQSHALLNDPTLIEDYS Sbjct: 1 MSNKEEHVDETSASGVKEVSSIAARHDNGYAPSLITSTSGMDSFQSHALLNDPTLIEDYS 60 Query: 61 DIINNRPTSGSKLTLGNEDSESMGGSVVVTPTSNKSSPFNSKLNILSNAAEKGHDVLRNR 120 DIINNRPTSGSKLTLGNEDSESMGGSVVVTPTSNKSSPFNSKLNILSNAAEKGHDVLRNR Sbjct: 61 DIINNRPTSGSKLTLGNEDSESMGGSVVVTPTSNKSSPFNSKLNILSNAAEKGHDVLRNR 120 Query: 121 DDDKELEEENVEKHMHSNSKRDQRHYKENSSELPDSYDYSDSEFEDNLERRLQEIETDSV 180 DDDKELEEENVEKHMHSNSKRDQRHYKENSSELPDSYDYSDSEFEDNLERRLQEIETDSV Sbjct: 121 DDDKELEEENVEKHMHSNSKRDQRHYKENSSELPDSYDYSDSEFEDNLERRLQEIETDSV 180 Query: 181 DSADKDEVHFSVNNTMNPDVDDFSDGLKYAISEDEDEEENYSDDDDFDRKFQDSGFQGEK 240 DSADKDEVHFSVNNTMNPDVDDFSDGLKYAISEDEDEEENYSDDDDFDRKFQDSGFQGEK Sbjct: 181 DSADKDEVHFSVNNTMNPDVDDFSDGLKYAISEDEDEEENYSDDDDFDRKFQDSGFQGEK 240 Query: 241 DDLEEENDDYQPLSPPRELDPDKLYALYAFNGHDSSHCQLGQDEPCILLNDQDAYWWLVK 300 DDLEEENDDYQPLSPPRELDPDKLYALYAFNGHDSSHCQLGQDEPCILLNDQDAYWWLVK Sbjct: 241 DDLEEENDDYQPLSPPRELDPDKLYALYAFNGHDSSHCQLGQDEPCILLNDQDAYWWLVK 300 Query: 301 RITDGKIGFAPAEILETFPERLARLNCWKNENMSSQSVASSDSKDDSISSGNKNQSDAES 360 RITDGKIGFAPAEILETFPERLARLNCWKNENMSSQSVASSDSKDDSISSGNKNQSDAES Sbjct: 301 RITDGKIGFAPAEILETFPERLARLNCWKNENMSSQSVASSDSKDDSISSGNKNQSDAES 360 Query: 361 IIPTPALNGYGKGNKSVSFNDVVGYADRFIDDAIEDTSLDSNDDGGEGNGQSYDDDVDND 420 IIPTPALNGYGKGNKSVSFNDVVGYADRFIDDAIEDTSLDSNDDGGEGNGQSYDDDVDND Sbjct: 361 IIPTPALNGYGKGNKSVSFNDVVGYADRFIDDAIEDTSLDSNDDGGEGNGQSYDDDVDND 420 Query: 421 KETKVTHRDEYTEAKLNFAKFQDDDTSDVVSDVSFSTSLNTPLNVKKVRRQDNKNESEPK 480 KETKVTHRDEYTEAKLNFAKFQDDDTSDVVSDVSFSTSLNTPLNVKKVRRQDNKNESEPK Sbjct: 421 KETKVTHRDEYTEAKLNFAKFQDDDTSDVVSDVSFSTSLNTPLNVKKVRRQDNKNESEPK 480 Query: 481 TSSSKDREDDYNANRYVGQEKSEPVDSDYDTDLKKVFEAPRMPFANGMAKSDSQNSLSTI 540 TSSSKDREDDYNANRYVGQEKSEPVDSDYDTDLKKVFEAPRMPFANGMAKSDSQNSLSTI Sbjct: 481 TSSSKDREDDYNANRYVGQEKSEPVDSDYDTDLKKVFEAPRMPFANGMAKSDSQNSLSTI 540 Query: 541 GEFSPSSSEWTNESPSTPIVEESSSIPSSRAIRTFTYIMQNRKLRDNKRGKHRGQIQASL 600 GEFSPSSSEWTNESPSTPIVEESSSIPSSRAIRTFTYIMQNRKLRDNKRGKHRGQIQASL Sbjct: 541 GEFSPSSSEWTNESPSTPIVEESSSIPSSRAIRTFTYIMQNRKLRDNKRGKHRGQIQASL 600 Query: 601 GSSGGMPNQTDAEQPKEELEKHHSTPEEEKQSTLSLHSSSEEDFYMDEQRAVSSASINSS 660 GSSGGMPNQTDAEQPKEELEKHHSTPEEEKQSTLSLHSSSEEDFYMDEQRAVSSASINSS Sbjct: 601 GSSGGMPNQTDAEQPKEELEKHHSTPEEEKQSTLSLHSSSEEDFYMDEQRAVSSASINSS 660 Query: 661 LSGSRALSNTNMSDPASKPNSLVQHLYAPVFDRMDVLMKQL 701 LSGSRALSNTNMSDPASKPNSLVQHLYAPVFDRMDVLMK + Sbjct: 661 LSGSRALSNTNMSDPASKPNSLVQHLYAPVFDRMDVLMKPI 701 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.305 0.125 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,183,887 Number of Sequences: 6497 Number of extensions: 294023 Number of successful extensions: 3060 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3057 Number of HSP's gapped (non-prelim): 1 length of query: 707 length of database: 2,996,526 effective HSP length: 97 effective length of query: 610 effective length of database: 2,366,317 effective search space: 1443453370 effective search space used: 1443453370 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YAL014C Annotated|01:129020:128253| frame 5; YAL014C/SYN8; Verified; this gene contains 1 exon (255 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YAL014C UIP2 SGDID:S0000012, Chr I from 128400-129017, reverse c... 379 e-106 >YAL014C UIP2 SGDID:S0000012, Chr I from 128400-129017, reverse complement Length = 205 Score = 379 bits (972), Expect = e-106 Identities = 192/192 (100%), Positives = 192/192 (100%) Query: 1 MDVLKLGYELDQLSDLVEERTRLVSVLKLAPTSNDNVTLKRQLGSILELLQKCAPNDELI 60 MDVLKLGYELDQLSDLVEERTRLVSVLKLAPTSNDNVTLKRQLGSILELLQKCAPNDELI Sbjct: 1 MDVLKLGYELDQLSDLVEERTRLVSVLKLAPTSNDNVTLKRQLGSILELLQKCAPNDELI 60 Query: 61 SRYNTILDKIPDTAVDKELYRFQQQVARNTDEVSKESLKKVRFKNDDELTVMYKDDDEQD 120 SRYNTILDKIPDTAVDKELYRFQQQVARNTDEVSKESLKKVRFKNDDELTVMYKDDDEQD Sbjct: 61 SRYNTILDKIPDTAVDKELYRFQQQVARNTDEVSKESLKKVRFKNDDELTVMYKDDDEQD 120 Query: 121 EESPLPSTHTPYKDEPLQSQLQSQSQPQPPQPMVSNQELFINQQQQLLEQDSHLGALSQS 180 EESPLPSTHTPYKDEPLQSQLQSQSQPQPPQPMVSNQELFINQQQQLLEQDSHLGALSQS Sbjct: 121 EESPLPSTHTPYKDEPLQSQLQSQSQPQPPQPMVSNQELFINQQQQLLEQDSHLGALSQS 180 Query: 181 IGRTHDISLDLN 192 IGRTHDISLDLN Sbjct: 181 IGRTHDISLDLN 192 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.133 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,664,542 Number of Sequences: 6497 Number of extensions: 84038 Number of successful extensions: 686 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 685 Number of HSP's gapped (non-prelim): 1 length of query: 255 length of database: 2,996,526 effective HSP length: 88 effective length of query: 167 effective length of database: 2,424,790 effective search space: 404939930 effective search space used: 404939930 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL097W Annotated|02:40828:43092| frame 1; YBL097W/BRN1; Verified; this gene contains 1 exon (754 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBL097W BRN1 SGDID:S0000193, Chr II from 40903-43089 1464 0.0 >YBL097W BRN1 SGDID:S0000193, Chr II from 40903-43089 Length = 728 Score = 1464 bits (3790), Expect = 0.0 Identities = 728/728 (100%), Positives = 728/728 (100%) Query: 27 MMANFEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNINFQKASATLDGCIKIY 86 MMANFEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNINFQKASATLDGCIKIY Sbjct: 1 MMANFEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNINFQKASATLDGCIKIY 60 Query: 87 SSRVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPIS 146 SSRVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPIS Sbjct: 61 SSRVDSVTTETGKLLSGLAQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPIS 120 Query: 147 NDPDVNNTRRRVYNRVLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGAKSLLLN 206 NDPDVNNTRRRVYNRVLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGAKSLLLN Sbjct: 121 NDPDVNNTRRRVYNRVLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGAKSLLLN 180 Query: 207 TLNIDNTARVIFDASIKDTQNVGQGKLQRKEEELIERDSLVDDENEPSQSLISTRNDSTV 266 TLNIDNTARVIFDASIKDTQNVGQGKLQRKEEELIERDSLVDDENEPSQSLISTRNDSTV Sbjct: 181 TLNIDNTARVIFDASIKDTQNVGQGKLQRKEEELIERDSLVDDENEPSQSLISTRNDSTV 240 Query: 267 NDSVISAPSMEDEILSLGMDFIKFDQIAVCEISGSIEQLRNVVEDINQAKDFIENVNNRF 326 NDSVISAPSMEDEILSLGMDFIKFDQIAVCEISGSIEQLRNVVEDINQAKDFIENVNNRF Sbjct: 241 NDSVISAPSMEDEILSLGMDFIKFDQIAVCEISGSIEQLRNVVEDINQAKDFIENVNNRF 300 Query: 327 DNFLTEEELQAAVPDNAEDDSDGFDMGMQQELCYPDENHDNTSHDEQDDDNVNSTTGSIF 386 DNFLTEEELQAAVPDNAEDDSDGFDMGMQQELCYPDENHDNTSHDEQDDDNVNSTTGSIF Sbjct: 301 DNFLTEEELQAAVPDNAEDDSDGFDMGMQQELCYPDENHDNTSHDEQDDDNVNSTTGSIF 360 Query: 387 EKDLMAYFDENLNRNWRGREHWKVRNFKKANLVNKESDLLEETRTTIGDTTDKNTTDDKS 446 EKDLMAYFDENLNRNWRGREHWKVRNFKKANLVNKESDLLEETRTTIGDTTDKNTTDDKS Sbjct: 361 EKDLMAYFDENLNRNWRGREHWKVRNFKKANLVNKESDLLEETRTTIGDTTDKNTTDDKS 420 Query: 447 MDTKKKHKQKKVLEIDFFKTDDSFEDKVFASKGRTKIDMPIKNRKNDTHYLLPDDFHFST 506 MDTKKKHKQKKVLEIDFFKTDDSFEDKVFASKGRTKIDMPIKNRKNDTHYLLPDDFHFST Sbjct: 421 MDTKKKHKQKKVLEIDFFKTDDSFEDKVFASKGRTKIDMPIKNRKNDTHYLLPDDFHFST 480 Query: 507 DRITRLFIKPAQKMSLFSHRKHTRGDVSSGLFEKSTVSANHSNNDIPTIADEHFWADNYE 566 DRITRLFIKPAQKMSLFSHRKHTRGDVSSGLFEKSTVSANHSNNDIPTIADEHFWADNYE Sbjct: 481 DRITRLFIKPAQKMSLFSHRKHTRGDVSSGLFEKSTVSANHSNNDIPTIADEHFWADNYE 540 Query: 567 RKEQEEKEKEQSKEVGDVVGGALDNPFEDDMDGVDFNQAFEGTDDNEEASVKLDLQDDED 626 RKEQEEKEKEQSKEVGDVVGGALDNPFEDDMDGVDFNQAFEGTDDNEEASVKLDLQDDED Sbjct: 541 RKEQEEKEKEQSKEVGDVVGGALDNPFEDDMDGVDFNQAFEGTDDNEEASVKLDLQDDED 600 Query: 627 HKFPIRENKVTYSRVSKKVDVRRLKKNVWRSINNLIQEHDSRKNREQSSNDSETHTEDES 686 HKFPIRENKVTYSRVSKKVDVRRLKKNVWRSINNLIQEHDSRKNREQSSNDSETHTEDES Sbjct: 601 HKFPIRENKVTYSRVSKKVDVRRLKKNVWRSINNLIQEHDSRKNREQSSNDSETHTEDES 660 Query: 687 TKELKFSDIIQGISKMYSDDTLKDISTSFCFICLLHLANEHGLQITHTENYNDLIVNYED 746 TKELKFSDIIQGISKMYSDDTLKDISTSFCFICLLHLANEHGLQITHTENYNDLIVNYED Sbjct: 661 TKELKFSDIIQGISKMYSDDTLKDISTSFCFICLLHLANEHGLQITHTENYNDLIVNYED 720 Query: 747 LATTQAAS 754 LATTQAAS Sbjct: 721 LATTQAAS 728 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.311 0.131 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,325,107 Number of Sequences: 6497 Number of extensions: 286168 Number of successful extensions: 1831 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1828 Number of HSP's gapped (non-prelim): 1 length of query: 754 length of database: 2,996,526 effective HSP length: 98 effective length of query: 656 effective length of database: 2,359,820 effective search space: 1548041920 effective search space used: 1548041920 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR074W Annotated|02:386281:389211| frame 1; YBR074W; Uncharacterized; this gene contains 1 exon (976 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR075W YBR075W SGDID:S0000279, Chr II from 387793-389175 917 0.0 YBR074W YBR074W SGDID:S0000278, Chr II from 386243-387484 806 0.0 >YBR075W YBR075W SGDID:S0000279, Chr II from 387793-389175 Length = 460 Score = 917 bits (2369), Expect = 0.0 Identities = 460/460 (100%), Positives = 460/460 (100%) Query: 517 MRTRKRLGRECRDHHSNYSSHSQIDMERDGQENLEQPQDQLTSSQDDQASIQDDNVSTTS 576 MRTRKRLGRECRDHHSNYSSHSQIDMERDGQENLEQPQDQLTSSQDDQASIQDDNVSTTS Sbjct: 1 MRTRKRLGRECRDHHSNYSSHSQIDMERDGQENLEQPQDQLTSSQDDQASIQDDNVSTTS 60 Query: 577 AGPSHNVDEDHGMDSSSQQHDERVPLLKGSNSMEEGLSTRENSLKLEYTDYAWIIQFLLI 636 AGPSHNVDEDHGMDSSSQQHDERVPLLKGSNSMEEGLSTRENSLKLEYTDYAWIIQFLLI Sbjct: 61 AGPSHNVDEDHGMDSSSQQHDERVPLLKGSNSMEEGLSTRENSLKLEYTDYAWIIQFLLI 120 Query: 637 VPIPSFILFNSVDVIMDALNHTVQEGSKATFDVLRFGMVGSILIALPILPFFYKVNYITI 696 VPIPSFILFNSVDVIMDALNHTVQEGSKATFDVLRFGMVGSILIALPILPFFYKVNYITI Sbjct: 121 VPIPSFILFNSVDVIMDALNHTVQEGSKATFDVLRFGMVGSILIALPILPFFYKVNYITI 180 Query: 697 SLTALLFLISASKTLLVHPFTNSNPLKVRFSQNIDLSQGNAASVHVLGREGNFLKPMLQD 756 SLTALLFLISASKTLLVHPFTNSNPLKVRFSQNIDLSQGNAASVHVLGREGNFLKPMLQD Sbjct: 181 SLTALLFLISASKTLLVHPFTNSNPLKVRFSQNIDLSQGNAASVHVLGREGNFLKPMLQD 240 Query: 757 LPSIKYSSTHINCTSVTNGMELCMYDGMQPNLLSTNGNTNISSMVKVHVLHNNRNSTERS 816 LPSIKYSSTHINCTSVTNGMELCMYDGMQPNLLSTNGNTNISSMVKVHVLHNNRNSTERS Sbjct: 241 LPSIKYSSTHINCTSVTNGMELCMYDGMQPNLLSTNGNTNISSMVKVHVLHNNRNSTERS 300 Query: 817 PYEPIVAELLLEVKEFRACTLTFESRHQAKSPVREITVYQKKNSAPQKANITKTIKSASG 876 PYEPIVAELLLEVKEFRACTLTFESRHQAKSPVREITVYQKKNSAPQKANITKTIKSASG Sbjct: 301 PYEPIVAELLLEVKEFRACTLTFESRHQAKSPVREITVYQKKNSAPQKANITKTIKSASG 360 Query: 877 INELQLHKLDFDQETYHIGVQWFPKLLTDGNVEDDKLGTKDELSVSISCYWGEYDSESVV 936 INELQLHKLDFDQETYHIGVQWFPKLLTDGNVEDDKLGTKDELSVSISCYWGEYDSESVV Sbjct: 361 INELQLHKLDFDQETYHIGVQWFPKLLTDGNVEDDKLGTKDELSVSISCYWGEYDSESVV 420 Query: 937 NGTAVRKIPAFDELINYAPLSFSFTNEQKGLVIVKDAIIL 976 NGTAVRKIPAFDELINYAPLSFSFTNEQKGLVIVKDAIIL Sbjct: 421 NGTAVRKIPAFDELINYAPLSFSFTNEQKGLVIVKDAIIL 460 >YBR074W YBR074W SGDID:S0000278, Chr II from 386243-387484 Length = 413 Score = 806 bits (2081), Expect = 0.0 Identities = 396/396 (100%), Positives = 396/396 (100%) Query: 1 MKLKSVFRSVLKYRKTNLSLLLLITYSIITLLYIFDHERYKLNLPKEDEHPEFNDLLETA 60 MKLKSVFRSVLKYRKTNLSLLLLITYSIITLLYIFDHERYKLNLPKEDEHPEFNDLLETA Sbjct: 1 MKLKSVFRSVLKYRKTNLSLLLLITYSIITLLYIFDHERYKLNLPKEDEHPEFNDLLETA 60 Query: 61 WGDLQIITASFHPYTSKENDKVHDYLLKRVLEITGNSSFASVSDDKESERSILFQQQDPF 120 WGDLQIITASFHPYTSKENDKVHDYLLKRVLEITGNSSFASVSDDKESERSILFQQQDPF Sbjct: 61 WGDLQIITASFHPYTSKENDKVHDYLLKRVLEITGNSSFASVSDDKESERSILFQQQDPF 120 Query: 121 NESSRFSRVTYFESSNILVKLEGKNPEEEGLLLSAHFDSVPTGYGATDDGMGVVSLLANL 180 NESSRFSRVTYFESSNILVKLEGKNPEEEGLLLSAHFDSVPTGYGATDDGMGVVSLLANL Sbjct: 121 NESSRFSRVTYFESSNILVKLEGKNPEEEGLLLSAHFDSVPTGYGATDDGMGVVSLLANL 180 Query: 181 KYHIKHRPNRTLIFNFNNNEEFGLLGASTYFDHSWSNLTKYVINLEGTGAGGKAVLFRTS 240 KYHIKHRPNRTLIFNFNNNEEFGLLGASTYFDHSWSNLTKYVINLEGTGAGGKAVLFRTS Sbjct: 181 KYHIKHRPNRTLIFNFNNNEEFGLLGASTYFDHSWSNLTKYVINLEGTGAGGKAVLFRTS 240 Query: 241 DTSTARIYQQSVKENPFGNSIYQQGFYSRYVRSETDYKIYEENGMRGWDVAFYKPRNLYH 300 DTSTARIYQQSVKENPFGNSIYQQGFYSRYVRSETDYKIYEENGMRGWDVAFYKPRNLYH Sbjct: 241 DTSTARIYQQSVKENPFGNSIYQQGFYSRYVRSETDYKIYEENGMRGWDVAFYKPRNLYH 300 Query: 301 TIKDSIQYTSKASLWHMLHTSLQLSAYVASNSLDTADQTPACYFDFIGLKFFVISAKTLF 360 TIKDSIQYTSKASLWHMLHTSLQLSAYVASNSLDTADQTPACYFDFIGLKFFVISAKTLF Sbjct: 301 TIKDSIQYTSKASLWHMLHTSLQLSAYVASNSLDTADQTPACYFDFIGLKFFVISAKTLF 360 Query: 361 YWNCIFLLVSPVVAIGLYLISRDRMTWKSYSWLSWT 396 YWNCIFLLVSPVVAIGLYLISRDRMTWKSYSWLSWT Sbjct: 361 YWNCIFLLVSPVVAIGLYLISRDRMTWKSYSWLSWT 396 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.320 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,101,853 Number of Sequences: 6497 Number of extensions: 288832 Number of successful extensions: 1085 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1081 Number of HSP's gapped (non-prelim): 2 length of query: 976 length of database: 2,996,526 effective HSP length: 100 effective length of query: 876 effective length of database: 2,346,826 effective search space: 2055819576 effective search space used: 2055819576 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR108W Annotated|02:454816:457659| frame 1; YBR108W; Uncharacterized; this gene contains 1 exon (947 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR108W YBR108W SGDID:S0000312, Chr II from 454781-457327 1724 0.0 >YBR108W YBR108W SGDID:S0000312, Chr II from 454781-457327 Length = 848 Score = 1724 bits (4466), Expect = 0.0 Identities = 841/846 (99%), Positives = 842/846 (99%) Query: 1 MGFWENNKDSITSGLKSAGKYGYQGTKYVAKTGYKASKKHYNNSKARRERKSGKKNSSDE 60 MGFWENNKDSITSGLKSAGKYGYQGTKYVAKTGYKASKKHYNNSKARRERKSGKKNSSDE Sbjct: 1 MGFWENNKDSITSGLKSAGKYGYQGTKYVAKTGYKASKKHYNNSKARRERKSGKKNSSDE 60 Query: 61 EYDSEDEMEYERKPTDIRSLKDPKSFPPPPLKPGQKTYTGQQQQQMPNGQASYAFQGAYQ 120 EYDSEDEMEYERKPTDIRSLKDPKSFPPPPLKPGQKTYTGQQQQQMPNGQASYAFQGAYQ Sbjct: 61 EYDSEDEMEYERKPTDIRSLKDPKSFPPPPLKPGQKTYTGQQQQQMPNGQASYAFQGAYQ 120 Query: 121 GQPGAGSTEQSQYAQPQYNQYPQQQLQQGVMPQQQQLQQGVVPQQPPIYGEQVPPYGSNS 180 GQPGAGSTEQSQYAQPQYNQYPQQQLQQGVMPQQQQLQQGVVPQQPPIYGEQVPPYGSNS Sbjct: 121 GQPGAGSTEQSQYAQPQYNQYPQQQLQQGVMPQQQQLQQGVVPQQPPIYGEQVPPYGSNS 180 Query: 181 NATSYQSLPQQNQPQNAIPSQVSLNSASQQSTGFVSQNLQYGTQSSNPAPSPSFQNGLQC 240 NATSYQSLPQQNQPQNAIPSQVSLNSASQQSTGFVSQNLQYGTQSSNPAPSPSFQNGLQC Sbjct: 181 NATSYQSLPQQNQPQNAIPSQVSLNSASQQSTGFVSQNLQYGTQSSNPAPSPSFQNGLQC 240 Query: 241 HQQPQYVSHGSTNLGQSQFPSGQQQQPTTQFGQQVLPSPAQPQQQQQGQPLPPPRGQVIL 300 HQQPQYVSHGSTNLGQSQFPSGQQQQPTTQFGQQVLPSPAQPQQQQQGQPLPPPRGQVIL Sbjct: 241 HQQPQYVSHGSTNLGQSQFPSGQQQQPTTQFGQQVLPSPAQPQQQQQGQPLPPPRGQVIL 300 Query: 301 PAPGEPLSNGFGQQQQQQQQQQQPLNQNNALLPQMNVEGVSGMAAVQPVYGQAMSSTTNM 360 PAPGEPLSNGFGQQQQQQQQQQQPLNQNNALLPQMNVEGVSGMAAVQPVYGQAMSSTTNM Sbjct: 301 PAPGEPLSNGFGQQQQQQQQQQQPLNQNNALLPQMNVEGVSGMAAVQPVYGQAMSSTTNM 360 Query: 361 QDSNPSYGASPMQGQPPVGGQPPVPVRMQPQPPQPMQQGNIYPIEPSLDSTGSTPHFEVT 420 QDSNPSYGASPMQGQPPVGGQPPVPVRMQPQPPQPMQQGNIYPIEPSLDSTGSTPHFEVT Sbjct: 361 QDSNPSYGASPMQGQPPVGGQPPVPVRMQPQPPQPMQQGNIYPIEPSLDSTGSTPHFEVT 420 Query: 421 PFDPDAPAPKPKIDIPTVDVSSLPPPPTHRDRGAVVHQEPAPSGKIQPNTTSSAASLPAK 480 PFDPDAPAPKPKIDIPTVDVSSLPPPPTHRDRGAVVHQEPAPSGKIQPNTTSSAASLPAK Sbjct: 421 PFDPDAPAPKPKIDIPTVDVSSLPPPPTHRDRGAVVHQEPAPSGKIQPNTTSSAASLPAK 480 Query: 481 HSRTTTADNERNSGNKENDESTSKSSILGHYDVDANIMPPPKPFRHGLDSVPSEHTTKNA 540 HSRTTTADNERNSGNKENDESTSKSSILGHYDVDANIMPPPKPFRHGLDSVPSEHTTKNA Sbjct: 481 HSRTTTADNERNSGNKENDESTSKSSILGHYDVDANIMPPPKPFRHGLDSVPSEHTTKNA 540 Query: 541 PERAVPILPPRNNVEPPPPPSRGNFERTESVLSTNAANVQEDPISNFLPPPKPFRHTETK 600 PERAVPILPPRNNVEPPPPPSRGNFERTESVLSTNAANVQEDPISNFLPPPKPFRHTETK Sbjct: 541 PERAVPILPPRNNVEPPPPPSRGNFERTESVLSTNAANVQEDPISNFLPPPKPFRHTETK 600 Query: 601 QNQNSKASPVEMKGEVLPGHPSEEDRNVEPSLVPQSKPQSQSQFRRAHMETQPIQNFQPP 660 QNQNSKASPVEMKGEVLPGHPSEEDRNVEPSLVPQSKPQSQSQFRRAHMETQPIQNFQPP Sbjct: 601 QNQNSKASPVEMKGEVLPGHPSEEDRNVEPSLVPQSKPQSQSQFRRAHMETQPIQNFQPP 660 Query: 661 PKPFRRSQSSNSSDSSYTIDGPEANHGRGRGRIAKHHDGDEYNPKSENSTENGRLGDAPN 720 PKPFRRSQSSNSSDSSYTIDGPEANHGRGRGRIAKHHDGDEYNPKSENSTENGRLGDAPN Sbjct: 661 PKPFRRSQSSNSSDSSYTIDGPEANHGRGRGRIAKHHDGDEYNPKSENSTENGRLGDAPN 720 Query: 721 SFIRKRAPTPPAPSRSEKLHEGTITSEVDSSKDANKYEKSIPPVTSSIQAQQSTKKAPPP 780 SFIRKRAPTPPAPSRSEKLHEGTITSEVDSSKDANKYEKSIPPVTSSIQAQQSTKKAPPP Sbjct: 721 SFIRKRAPTPPAPSRSEKLHEGTITSEVDSSKDANKYEKSIPPVTSSIQAQQSTKKAPPP 780 Query: 781 VVKPKPRNFSLKANEYPKELTREATGQDEVLNSITNELSHIKLRKTNVNLEKLGGSKKVK 840 VVKPKPRNFSLKANEYPKELTREATGQDEVLNSITNELSHIKLRKTNVNLEKLGGSKKVK Sbjct: 781 VVKPKPRNFSLKANEYPKELTREATGQDEVLNSITNELSHIKLRKTNVNLEKLGGSKKVK 840 Query: 841 DSSPVP 846 + P Sbjct: 841 TLALFP 846 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.305 0.126 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,775,518 Number of Sequences: 6497 Number of extensions: 367344 Number of successful extensions: 4031 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3985 Number of HSP's gapped (non-prelim): 3 length of query: 947 length of database: 2,996,526 effective HSP length: 100 effective length of query: 847 effective length of database: 2,346,826 effective search space: 1987761622 effective search space used: 1987761622 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR041W Annotated|02:318266:320275| frame 2; YBR041W/FAT1; Verified; this gene contains 1 exon (669 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR041W FAT1 SGDID:S0000245, Chr II from 318225-320096 1266 0.0 >YBR041W FAT1 SGDID:S0000245, Chr II from 318225-320096 Length = 623 Score = 1266 bits (3275), Expect = 0.0 Identities = 619/619 (100%), Positives = 619/619 (100%) Query: 1 MSPIQVVVFALSRIFLLLFRLIKLIITPIQKSLGYLFGNYFDELDRKYRYKEDWYIIPYF 60 MSPIQVVVFALSRIFLLLFRLIKLIITPIQKSLGYLFGNYFDELDRKYRYKEDWYIIPYF Sbjct: 1 MSPIQVVVFALSRIFLLLFRLIKLIITPIQKSLGYLFGNYFDELDRKYRYKEDWYIIPYF 60 Query: 61 LKSVFCYIIDVRRHRFQNWYLFIKQVQQNGDHLAISYTRPMAEKGEFQLETFTYIETYNI 120 LKSVFCYIIDVRRHRFQNWYLFIKQVQQNGDHLAISYTRPMAEKGEFQLETFTYIETYNI Sbjct: 61 LKSVFCYIIDVRRHRFQNWYLFIKQVQQNGDHLAISYTRPMAEKGEFQLETFTYIETYNI 120 Query: 121 VLRLSHILHFDYNVQAGDYVAIDCTNKPLFVFLWLSLWNIGAIPAFLNYNTKGTPLVHSL 180 VLRLSHILHFDYNVQAGDYVAIDCTNKPLFVFLWLSLWNIGAIPAFLNYNTKGTPLVHSL Sbjct: 121 VLRLSHILHFDYNVQAGDYVAIDCTNKPLFVFLWLSLWNIGAIPAFLNYNTKGTPLVHSL 180 Query: 181 KISNITQVFIDPDASNPIRESEEEIKNALPDVKLNYLEEQDLMHELLNSQSPEFLQQDNV 240 KISNITQVFIDPDASNPIRESEEEIKNALPDVKLNYLEEQDLMHELLNSQSPEFLQQDNV Sbjct: 181 KISNITQVFIDPDASNPIRESEEEIKNALPDVKLNYLEEQDLMHELLNSQSPEFLQQDNV 240 Query: 241 RTPLGLTDFKPSMLIYTSGTTGLPKSAIMSWRKSSVGCQVFGHVLHMTNESTVFTAMPLF 300 RTPLGLTDFKPSMLIYTSGTTGLPKSAIMSWRKSSVGCQVFGHVLHMTNESTVFTAMPLF Sbjct: 241 RTPLGLTDFKPSMLIYTSGTTGLPKSAIMSWRKSSVGCQVFGHVLHMTNESTVFTAMPLF 300 Query: 301 HSTAALLGACAILSHGGCLALSHKFSASTFWKQVYLTGATHIQYVGEVCRYLLHTPISKY 360 HSTAALLGACAILSHGGCLALSHKFSASTFWKQVYLTGATHIQYVGEVCRYLLHTPISKY Sbjct: 301 HSTAALLGACAILSHGGCLALSHKFSASTFWKQVYLTGATHIQYVGEVCRYLLHTPISKY 360 Query: 361 EKMHKVKVAYGNGLRPDIWQDFRKRFNIEVIGEFYAATEAPFATTTFQKGDFGIGACRNY 420 EKMHKVKVAYGNGLRPDIWQDFRKRFNIEVIGEFYAATEAPFATTTFQKGDFGIGACRNY Sbjct: 361 EKMHKVKVAYGNGLRPDIWQDFRKRFNIEVIGEFYAATEAPFATTTFQKGDFGIGACRNY 420 Query: 421 GTIIQWFLSFQQTLVRMDPNDDSVIYRNSKGFCEVAPVGEPGEMLMRIFFPKKPETSFQG 480 GTIIQWFLSFQQTLVRMDPNDDSVIYRNSKGFCEVAPVGEPGEMLMRIFFPKKPETSFQG Sbjct: 421 GTIIQWFLSFQQTLVRMDPNDDSVIYRNSKGFCEVAPVGEPGEMLMRIFFPKKPETSFQG 480 Query: 481 YLGNAKETKSKVVRDVFRRGDAWYRCGDLLKADEYGLWYFLDRMGDTFRWKSENVSTTEV 540 YLGNAKETKSKVVRDVFRRGDAWYRCGDLLKADEYGLWYFLDRMGDTFRWKSENVSTTEV Sbjct: 481 YLGNAKETKSKVVRDVFRRGDAWYRCGDLLKADEYGLWYFLDRMGDTFRWKSENVSTTEV 540 Query: 541 EDQLTASNKEQYAQVLVVGIKVPKYEGRAGFAVIKLTDNSLDITAKTKLLNDSLSRLNLP 600 EDQLTASNKEQYAQVLVVGIKVPKYEGRAGFAVIKLTDNSLDITAKTKLLNDSLSRLNLP Sbjct: 541 EDQLTASNKEQYAQVLVVGIKVPKYEGRAGFAVIKLTDNSLDITAKTKLLNDSLSRLNLP 600 Query: 601 SYAMPLFVKFVDEIKMTDN 619 SYAMPLFVKFVDEIKMTDN Sbjct: 601 SYAMPLFVKFVDEIKMTDN 619 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.323 0.139 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,138,982 Number of Sequences: 6497 Number of extensions: 190395 Number of successful extensions: 534 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 533 Number of HSP's gapped (non-prelim): 1 length of query: 669 length of database: 2,996,526 effective HSP length: 97 effective length of query: 572 effective length of database: 2,366,317 effective search space: 1353533324 effective search space used: 1353533324 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR098W Annotated|02:441509:443584| frame 2; YBR098W/MMS4; Verified; this gene contains 1 exon (691 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR098W MMS4 SGDID:S0000302, Chr II from 441473-442888 923 0.0 YBR100W YBR100W SGDID:S0000304, Chr II from 443211-443549 226 1e-59 >YBR098W MMS4 SGDID:S0000302, Chr II from 441473-442888 Length = 471 Score = 923 bits (2386), Expect = 0.0 Identities = 465/465 (100%), Positives = 465/465 (100%) Query: 1 MSQIVDFVEDKDSRNDASIQIIDGPSNVEIIALSESMDQDECKRAHVSSAEMIPSSPQRK 60 MSQIVDFVEDKDSRNDASIQIIDGPSNVEIIALSESMDQDECKRAHVSSAEMIPSSPQRK Sbjct: 1 MSQIVDFVEDKDSRNDASIQIIDGPSNVEIIALSESMDQDECKRAHVSSAEMIPSSPQRK 60 Query: 61 SVSNDVENVDLNKSIELSAPFFQDISISKLDDFSTTVNSIIDSSLRNENNAKGNAKKLLD 120 SVSNDVENVDLNKSIELSAPFFQDISISKLDDFSTTVNSIIDSSLRNENNAKGNAKKLLD Sbjct: 61 SVSNDVENVDLNKSIELSAPFFQDISISKLDDFSTTVNSIIDSSLRNENNAKGNAKKLLD 120 Query: 121 DLISDEWSADLESSGKKHNKSQYNLRDIAEKWGVQSLKNPEPIAVDCEYKTQGIGKTNSD 180 DLISDEWSADLESSGKKHNKSQYNLRDIAEKWGVQSLKNPEPIAVDCEYKTQGIGKTNSD Sbjct: 121 DLISDEWSADLESSGKKHNKSQYNLRDIAEKWGVQSLKNPEPIAVDCEYKTQGIGKTNSD 180 Query: 181 ISDSPKSQIGAADILFDFPLSPVKHENPTEEKHNSIANENSSPDNSLKPAGKQNHGEDGT 240 ISDSPKSQIGAADILFDFPLSPVKHENPTEEKHNSIANENSSPDNSLKPAGKQNHGEDGT Sbjct: 181 ISDSPKSQIGAADILFDFPLSPVKHENPTEEKHNSIANENSSPDNSLKPAGKQNHGEDGT 240 Query: 241 SMAKRVYNKGEDEQEHLPKGKKRTIALSRTLINSTKLPDTVELNLSKFLDSSDSITTDVL 300 SMAKRVYNKGEDEQEHLPKGKKRTIALSRTLINSTKLPDTVELNLSKFLDSSDSITTDVL Sbjct: 241 SMAKRVYNKGEDEQEHLPKGKKRTIALSRTLINSTKLPDTVELNLSKFLDSSDSITTDVL 300 Query: 301 STPAKGSNIVRTGSQPIFSNANCFQEAKRSKTLTAEDPKCTKNTAREVSQLENYIAYGQY 360 STPAKGSNIVRTGSQPIFSNANCFQEAKRSKTLTAEDPKCTKNTAREVSQLENYIAYGQY Sbjct: 301 STPAKGSNIVRTGSQPIFSNANCFQEAKRSKTLTAEDPKCTKNTAREVSQLENYIAYGQY 360 Query: 361 YTREDSKNKIRHLLKENKNAFKRVNQIYRDNIKARSQMIIEFSPSLLQLFKKGDSDLQQQ 420 YTREDSKNKIRHLLKENKNAFKRVNQIYRDNIKARSQMIIEFSPSLLQLFKKGDSDLQQQ Sbjct: 361 YTREDSKNKIRHLLKENKNAFKRVNQIYRDNIKARSQMIIEFSPSLLQLFKKGDSDLQQQ 420 Query: 421 LAPAVVQSSYNDSMPLLRFLRKCDSIYDFSNDFYYPCDPKIVEEN 465 LAPAVVQSSYNDSMPLLRFLRKCDSIYDFSNDFYYPCDPKIVEEN Sbjct: 421 LAPAVVQSSYNDSMPLLRFLRKCDSIYDFSNDFYYPCDPKIVEEN 465 >YBR100W YBR100W SGDID:S0000304, Chr II from 443211-443549 Length = 112 Score = 226 bits (575), Expect = 1e-59 Identities = 112/112 (100%), Positives = 112/112 (100%) Query: 580 MEFINSLPNLVSLIGKQRMDPAIRYMKYAHLNVKSAQDSTETLKKTFHQIGRMPEMKANN 639 MEFINSLPNLVSLIGKQRMDPAIRYMKYAHLNVKSAQDSTETLKKTFHQIGRMPEMKANN Sbjct: 1 MEFINSLPNLVSLIGKQRMDPAIRYMKYAHLNVKSAQDSTETLKKTFHQIGRMPEMKANN 60 Query: 640 VVSLYPSFQSLLEDIEKGRLQSDNEGKYLMTEAVEKRLYKLFTCTDPNDTIE 691 VVSLYPSFQSLLEDIEKGRLQSDNEGKYLMTEAVEKRLYKLFTCTDPNDTIE Sbjct: 61 VVSLYPSFQSLLEDIEKGRLQSDNEGKYLMTEAVEKRLYKLFTCTDPNDTIE 112 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.312 0.130 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,413,583 Number of Sequences: 6497 Number of extensions: 212846 Number of successful extensions: 897 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 895 Number of HSP's gapped (non-prelim): 2 length of query: 691 length of database: 2,996,526 effective HSP length: 97 effective length of query: 594 effective length of database: 2,366,317 effective search space: 1405592298 effective search space used: 1405592298 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL013W Annotated|02:202059:203264| frame 3; YBL013W/FMT1; Verified; this gene contains 1 exon (401 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBL013W FMT1 SGDID:S0000109, Chr II from 202018-203199 775 0.0 >YBL013W FMT1 SGDID:S0000109, Chr II from 202018-203199 Length = 393 Score = 775 bits (2002), Expect = 0.0 Identities = 387/389 (99%), Positives = 387/389 (99%) Query: 1 MVKMRRITPTRLLFTCRYISNNASPPVQPLNVLFFGSDTFSNFSLQALNELRQNNGSCGI 60 MVKMRRITPTRLLFTCRYISNNASPPVQPLNVLFFGSDTFSNFSLQALNELRQNNGSCGI Sbjct: 1 MVKMRRITPTRLLFTCRYISNNASPPVQPLNVLFFGSDTFSNFSLQALNELRQNNGSCGI 60 Query: 61 VDNIQVVTRSPKWCGRQKSILKYPPIFDMAEKLQLPRPITCDTKQEMLALSKLTPSRQGN 120 VDNIQVVTRSPKWCGRQKSILKYPPIFDMAEKLQLPRPITCDTKQEMLALSKLTPSRQGN Sbjct: 61 VDNIQVVTRSPKWCGRQKSILKYPPIFDMAEKLQLPRPITCDTKQEMLALSKLTPSRQGN 120 Query: 121 PENDGSGAPFNAIIAVSFGKLIPGDLIRAVPLALNVHPSLLPRHKGSAPIQRALLEGDTY 180 PENDGSGAPFNAIIAVSFGKLIPGDLIRAVPLALNVHPSLLPRHKGSAPIQRALLEGDTY Sbjct: 121 PENDGSGAPFNAIIAVSFGKLIPGDLIRAVPLALNVHPSLLPRHKGSAPIQRALLEGDTY 180 Query: 181 TGVTIQTLHPDRFDHGAIVAQTEPLAIATMLSKGRVNDSTADFNSEGLPRRTAILMDQLG 240 TGVTIQTLHPDRFDHGAIVAQTEPLAIATMLSKGRVNDSTADFNSEGLPRRTAILMDQLG Sbjct: 181 TGVTIQTLHPDRFDHGAIVAQTEPLAIATMLSKGRVNDSTADFNSEGLPRRTAILMDQLG 240 Query: 241 ALGAQLLGQTLRERLYLPQNRVQAPTAYKPSYAHRITTEDKRIHWARDSAAELLNKLETL 300 ALGAQLLGQTLRERLYLPQNRVQAPTAYKPSYAHRITTEDKRIHWARDSAAELLNKLETL Sbjct: 241 ALGAQLLGQTLRERLYLPQNRVQAPTAYKPSYAHRITTEDKRIHWARDSAAELLNKLETL 300 Query: 301 GPLHAFKEATAARKDAQNSVLKRILFHECKVMRDARLDNGSKPGMFKYDDIKDCILVTCR 360 GPLHAFKEATAARKDAQNSVLKRILFHECKVMRDARLDNGSKPGMFKYDDIKDCILVTCR Sbjct: 301 GPLHAFKEATAARKDAQNSVLKRILFHECKVMRDARLDNGSKPGMFKYDDIKDCILVTCR 360 Query: 361 GNLLLCVSRLQFEGFAVERAGQFMARLRK 389 GNLLLCVSRLQFEGFAVERAGQFMAR K Sbjct: 361 GNLLLCVSRLQFEGFAVERAGQFMARCGK 389 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.322 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,254,343 Number of Sequences: 6497 Number of extensions: 94483 Number of successful extensions: 198 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 197 Number of HSP's gapped (non-prelim): 1 length of query: 401 length of database: 2,996,526 effective HSP length: 93 effective length of query: 308 effective length of database: 2,392,305 effective search space: 736829940 effective search space used: 736829940 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL006W-A Annotated|02:216714:216863| frame 3; YBL006W-A; Dubious; this gene contains 1 exon (49 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done ***** No hits found ****** Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.321 0.129 0.495 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 267,954 Number of Sequences: 6497 Number of extensions: 5640 Number of successful extensions: 13 Number of sequences better than 1.0e-30: 0 Number of HSP's better than 0.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 13 Number of HSP's gapped (non-prelim): 0 length of query: 49 length of database: 2,996,526 effective HSP length: 25 effective length of query: 24 effective length of database: 2,834,101 effective search space: 68018424 effective search space used: 68018424 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 315 (125.9 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL006C Annotated|02:217132:216590| frame 4; YBL006C/LDB7; Verified; this gene contains 1 exon (180 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBL006C YBL006C SGDID:S0000102, Chr II from 216654-217091, rever... 201 4e-53 >YBL006C YBL006C SGDID:S0000102, Chr II from 216654-217091, reverse complement Length = 145 Score = 201 bits (512), Expect = 4e-53 Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MSGSNMGYYDVLAGLSALEKSSQVVFSATELQQLTQQSHATDKGIEGSENSKAKVSKPKR 60 MSGSNMGYYDVLAGLSALEKSSQVVFSATELQQLTQQSHATDKGIEGSENSKAKVSKPKR Sbjct: 1 MSGSNMGYYDVLAGLSALEKSSQVVFSATELQQLTQQSHATDKGIEGSENSKAKVSKPKR 60 Query: 61 VAVHGYLGGKVSLADAAQVEYEVGHSLLGSYVPRQQLEALSSVD 104 VAVHGYLGGKVSLADAAQVEYEVGHSLLGSYVPRQQLEALSSVD Sbjct: 61 VAVHGYLGGKVSLADAAQVEYEVGHSLLGSYVPRQQLEALSSVD 104 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.316 0.129 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 916,571 Number of Sequences: 6497 Number of extensions: 31641 Number of successful extensions: 94 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93 Number of HSP's gapped (non-prelim): 1 length of query: 180 length of database: 2,996,526 effective HSP length: 84 effective length of query: 96 effective length of database: 2,450,778 effective search space: 235274688 effective search space used: 235274688 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 319 (127.5 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL066C Annotated|02:100117:96671| frame 4; YBL066C/SEF1; Verified; this gene contains 1 exon (1148 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBL066C SEF1 SGDID:S0000162, Chr II from 96903-100076, reverse c... 2101 0.0 >YBL066C SEF1 SGDID:S0000162, Chr II from 96903-100076, reverse complement Length = 1057 Score = 2101 bits (5444), Expect = 0.0 Identities = 1040/1041 (99%), Positives = 1041/1041 (100%) Query: 1 MVKDNRDSDQDQDFSSAHMKRQPEQQQLQQHQFPSKKQRISHHDDSHQINHRPVTSCTHC 60 MVKDNRDSDQDQDFSSAHMKRQPEQQQLQQHQFPSKKQRISHHDDSHQINHRPVTSCTHC Sbjct: 1 MVKDNRDSDQDQDFSSAHMKRQPEQQQLQQHQFPSKKQRISHHDDSHQINHRPVTSCTHC 60 Query: 61 RQHKIKCDASQNFPHPCSRCEKIGLHCEINPQFRPKKGSQLQLLRQDVDEIKSKLDTLLA 120 RQHKIKCDASQNFPHPCSRCEKIGLHCEINPQFRPKKGSQLQLLRQDVDEIKSKLDTLLA Sbjct: 61 RQHKIKCDASQNFPHPCSRCEKIGLHCEINPQFRPKKGSQLQLLRQDVDEIKSKLDTLLA 120 Query: 121 NDSVFVHLLQQIPMGNSLLNKLNLHPTPTPGTIIPNPDSSPSSGSPTSSAAQRDSKVSVQ 180 NDSVFVHLLQQIPMGNSLLNKLNLHPTPTPGTIIPNPDSSPSSGSPTSSAAQRDSKVSVQ Sbjct: 121 NDSVFVHLLQQIPMGNSLLNKLNLHPTPTPGTIIPNPDSSPSSGSPTSSAAQRDSKVSVQ 180 Query: 181 TYLSREPQLLQANQGSNTNKFKANNEASSHMTLRASSLAQDSKGLVATEPNKLPPLLNDS 240 TYLSREPQLLQANQGSNTNKFKANNEASSHMTLRASSLAQDSKGLVATEPNKLPPLLNDS Sbjct: 181 TYLSREPQLLQANQGSNTNKFKANNEASSHMTLRASSLAQDSKGLVATEPNKLPPLLNDS 240 Query: 241 ALPNNSKESLPPALQMAFYKNNSAGNTPNGPFSPIQKTYSPHTTSTTVTTTTNQPPFAAT 300 ALPNNSKESLPPALQMAFYKNNSAGNTPNGPFSPIQKTYSPHTTSTTVTTTTNQPPFAAT Sbjct: 241 ALPNNSKESLPPALQMAFYKNNSAGNTPNGPFSPIQKTYSPHTTSTTVTTTTNQPPFAAT 300 Query: 301 SHVATNNNADRTKTPVVATTTTMPLLPSPHANVDEFVLGDISISIEKANRLHHIFVTRYL 360 SHVATNNNADRTKTPVVATTTTMPLLPSPHANVDEFVLGDISISIEKANRLHHIFVTRYL Sbjct: 301 SHVATNNNADRTKTPVVATTTTMPLLPSPHANVDEFVLGDISISIEKANRLHHIFVTRYL 360 Query: 361 PYFPIMYSNNATELYSQSQLLFWTVMLTACLSDPEPTMYCKLSSLIKQLAIETCWIRTPR 420 PYFPIMYSNNATELYSQSQLLFWTVMLTACLSDPEPTMYCKLSSLIKQLAIETCWIRTPR Sbjct: 361 PYFPIMYSNNATELYSQSQLLFWTVMLTACLSDPEPTMYCKLSSLIKQLAIETCWIRTPR 420 Query: 421 STHISQALLILCIWPLPNQKVLDDCSYRFVGLAKSLSYQLGLHRGEFISEFTRTQTSMPN 480 STHISQALLILCIWPLPNQKVLDDCSYRFVGLAKSLSYQLGLHRGEFISEFTRTQTSMPN Sbjct: 421 STHISQALLILCIWPLPNQKVLDDCSYRFVGLAKSLSYQLGLHRGEFISEFTRTQTSMPN 480 Query: 481 AEKWRTRTWLGIFFAELCWASILGLPPTSQTDYLLEKALSCGDEESEEDNNDSIDNNNND 540 AEKWRTRTWLGIFFAELCWASILGLPPTSQTDYLLEKALSCGDEESEEDNNDSIDNNNND Sbjct: 481 AEKWRTRTWLGIFFAELCWASILGLPPTSQTDYLLEKALSCGDEESEEDNNDSIDNNNND 540 Query: 541 KRNKKDEPHVESKYKLPGSFRRLLSLANFQAKLSHIIGSSTSSPDGLLEPKYRAETLSIL 600 KRNKKDEPHVESKYKLPGSFRRLLSLANFQAKLSHIIGSSTSSPDGLLEPKYRAETLSIL Sbjct: 541 KRNKKDEPHVESKYKLPGSFRRLLSLANFQAKLSHIIGSSTSSPDGLLEPKYRAETLSIL 600 Query: 601 GKELDLLAKTLNFQSDDTVNIYFLYVKLTVCCFAFLPETPPTDQIPYVTEAYLTATKIVT 660 GKELDLLAKTLNFQSDDTVNIYFLYVKLTVCCFAFLPETPPTDQIPYVTEAYLTATKIVT Sbjct: 601 GKELDLLAKTLNFQSDDTVNIYFLYVKLTVCCFAFLPETPPTDQIPYVTEAYLTATKIVT 660 Query: 661 LLNNLLETHQLIELPIYIRQAATFSALILFKLQLTPLLPDKYFDSARQSVVTIHRLYRNQ 720 LLNNLLETHQLIELPIYIRQAATFSALILFKLQLTPLLPDKYFDSARQSVVTIHRLYRNQ Sbjct: 661 LLNNLLETHQLIELPIYIRQAATFSALILFKLQLTPLLPDKYFDSARQSVVTIHRLYRNQ 720 Query: 721 LTAWATSVENDISRTASMLEKLNFVLIMHPEVFVEEDGIISRMRSHLTGSLFYDLVWCVH 780 LTAWATSVENDISRTASMLEKLNFVLIMHPEVFVEEDGIISRMRSHLTGSLFYDLVWCVH Sbjct: 721 LTAWATSVENDISRTASMLEKLNFVLIMHPEVFVEEDGIISRMRSHLTGSLFYDLVWCVH 780 Query: 781 EARRREMDPEYNKQALEKAAKKRKFSSNGIYNGTSSTGGITDRKLYPLPLYNHISRDDFE 840 EARRREMDPEYNKQALEKAAKKRKFSSNGIYNGTSSTGGITDRKLYPLPLYNHISRDDFE Sbjct: 781 EARRREMDPEYNKQALEKAAKKRKFSSNGIYNGTSSTGGITDRKLYPLPLYNHISRDDFE 840 Query: 841 TVTKTTPSGTTVTTLVPTKNALKQAEKLAKTNNGDSDGSIMEINGIPLSMLGETGSVKFQ 900 TVTKTTPSGTTVTTLVPTKNALKQAEKLAKTNNGDSDGSIMEINGIPLSMLGETGSVKFQ Sbjct: 841 TVTKTTPSGTTVTTLVPTKNALKQAEKLAKTNNGDSDGSIMEINGIPLSMLGETGSVKFQ 900 Query: 901 SLFANTSNSNDYNNNRTLLDASNDISIPSNSIYPVASVPASNNNPQSTKVDYYSNGPSVI 960 SLFANTSNSNDYNNNRTLLDASNDISIPSNSIYPVASVPASNNNPQSTKVDYYSNGPSVI Sbjct: 901 SLFANTSNSNDYNNNRTLLDASNDISIPSNSIYPVASVPASNNNPQSTKVDYYSNGPSVI 960 Query: 961 PDLSMKRSVSTPVNHFPASVPGLRNHPVGNLSNNVTLGIDHPIPREHSNLQNVTMNYNNQ 1020 PDLSMKRSVSTPVNHFPASVPGLRNHPVGNLSNNVTLGIDHPIPREHSNLQNVTMNYNNQ Sbjct: 961 PDLSMKRSVSTPVNHFPASVPGLRNHPVGNLSNNVTLGIDHPIPREHSNLQNVTMNYNNQ 1020 Query: 1021 FSNANAIGRSQSSMSHSRTPI 1041 FSNANAIGRSQSSMSHSRTP+ Sbjct: 1021 FSNANAIGRSQSSMSHSRTPL 1041 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.129 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,661,205 Number of Sequences: 6497 Number of extensions: 387204 Number of successful extensions: 3530 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3525 Number of HSP's gapped (non-prelim): 1 length of query: 1148 length of database: 2,996,526 effective HSP length: 101 effective length of query: 1047 effective length of database: 2,340,329 effective search space: 2450324463 effective search space used: 2450324463 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBL067C Annotated|02:95884:93641| frame 4; YBL067C/UBP13; Verified; this gene contains 1 exon (747 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBL067C UBP13 SGDID:S0000163, Chr II from 93814-95880, reverse c... 1347 0.0 YER098W UBP9 SGDID:S0000900, Chr V from 355462-357726 596 e-171 >YBL067C UBP13 SGDID:S0000163, Chr II from 93814-95880, reverse complement Length = 688 Score = 1347 bits (3485), Expect = 0.0 Identities = 664/666 (99%), Positives = 664/666 (99%) Query: 1 MIRRWLTISKSGKKKKAVNDTITEEVEKVDFKPVNHDINDELCYSESSDNPSSSLFVSNL 60 MIRRWLTISKSGKKKKAVNDTITEEVEKVDFKPVNHDINDELCYSESSDNPSSSLFVSNL Sbjct: 1 MIRRWLTISKSGKKKKAVNDTITEEVEKVDFKPVNHDINDELCYSESSDNPSSSLFVSNL 60 Query: 61 DTKETFLNEDNNLQISSGLDYSSETCNQGSNYSQDGIFYISNAKAINAYGGIITQGPEAP 120 DTKETFLNEDNNLQISSGLDYSSETCNQGSNYSQDGIFYISNAKAINAYGGIITQGPEAP Sbjct: 61 DTKETFLNEDNNLQISSGLDYSSETCNQGSNYSQDGIFYISNAKAINAYGGIITQGPEAP 120 Query: 121 ILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFPKKSRESDH 180 ILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFPKKSRESDH Sbjct: 121 ILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFPKKSRESDH 180 Query: 181 PRKKEMRGKKPRIFTEASFEKSIAGTNGHLPNPKPQSVDDGKPTPVNSVNSNTAGPSEKK 240 PRKKEMRGKKPRIFTEASFEKSIAGTNGHLPNPKPQSVDDGKPTPVNSVNSNTAGPSEKK Sbjct: 181 PRKKEMRGKKPRIFTEASFEKSIAGTNGHLPNPKPQSVDDGKPTPVNSVNSNTAGPSEKK 240 Query: 241 SKFFKSFSAKHVQDNNKKEGSPAILTTGKPSSRPQDAPPLIVETPNEPGAPSRLSFENVT 300 SKFFKSFSAKHVQDNNKKEGSPAILTTGKPSSRPQDAPPLIVETPNEPGAPSRLSFENVT Sbjct: 241 SKFFKSFSAKHVQDNNKKEGSPAILTTGKPSSRPQDAPPLIVETPNEPGAPSRLSFENVT 300 Query: 301 DRPPDVPRKIIVGRVLNYENPSRGSSNSNNLDLKGESNSSLSTPLDKKDTRRSSSSSQIS 360 DRPPDVPRKIIVGRVLNYENPSRGSSNSNNLDLKGESNSSLSTPLDKKDTRRSSSSSQIS Sbjct: 301 DRPPDVPRKIIVGRVLNYENPSRGSSNSNNLDLKGESNSSLSTPLDKKDTRRSSSSSQIS 360 Query: 361 PEHRKKSALIRGPVLNIDHSLNGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLK 420 PEHRKKSALIRGPVLNIDHSLNGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLK Sbjct: 361 PEHRKKSALIRGPVLNIDHSLNGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLK 420 Query: 421 RENVLFNTTMHQDAHEFFNFLLNELSEYIERENKKIAASDINSDSEPSKSKNFISDLFQG 480 RENVLFNTTMHQDAHEFFNFLLNELSEYIERENKKIAASDINSDSEPSKSKNFISDLFQG Sbjct: 421 RENVLFNTTMHQDAHEFFNFLLNELSEYIERENKKIAASDINSDSEPSKSKNFISDLFQG 480 Query: 481 TLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDEC 540 TLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDEC Sbjct: 481 TLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDEC 540 Query: 541 CGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVCQ 600 CGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVCQ Sbjct: 541 CGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVCQ 600 Query: 601 KYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATA 660 KYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATA Sbjct: 601 KYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATA 660 Query: 661 YVLFYK 666 YV F K Sbjct: 661 YVCFIK 666 >YER098W UBP9 SGDID:S0000900, Chr V from 355462-357726 Length = 754 Score = 596 bits (1536), Expect = e-171 Identities = 350/782 (44%), Positives = 487/782 (62%), Gaps = 64/782 (8%) Query: 1 MIRRWLTISKSG---KKKKAVNDTITEEVEKVDFKPVNHDINDELCYSESSDNPSSSLFV 57 MI+RWL++++ +K ND I + + K + + S S+ + +SS+ Sbjct: 1 MIKRWLSVNRKKSHPEKNTQGNDEINRKATSL--KKTKGSGDPSIAKSPSAKSSTSSI-P 57 Query: 58 SNLDTKET---FLNEDNNLQISSGLDYSSETCNQGSNYSQDGIFYISNAKAINAYGGIIT 114 SNL + E F ++ +NL +G + E + ++ S + + S A+ Sbjct: 58 SNLASHERRSKFSSQTDNL---AGNKHYHEHYHNMASTSDEREYDSSTTYEDRAFD---- 110 Query: 115 QGPEAPILAMKVSDSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFPKK 174 E+ IL ++D MPYGDGSNKVFGYENFGNTCYCNSVLQCLYN+ R N+L++P++ Sbjct: 111 --TESSILFTTITDLMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRYPER 168 Query: 175 SRESDHPRKKEMRGKKPRIFTEASFEKSIAGTNGHLPNPKPQSVDDGKPTPVNSVNSNTA 234 + RK +++G K R+FT SFE S TN N QS D+ ++ N + Sbjct: 169 VAAVNRIRKSDLKGSKIRVFTNESFETS---TNSGNSNTGYQSNDNE-----DAHNHHHL 220 Query: 235 GPSEKKSKFFKSFSAKHVQDNNKKEGSPAILTTGKPSSRPQDAPPLIVETPNEPGAPSR- 293 S++ + S S+ + NN + + + GK S +D+ E P Sbjct: 221 QQSDQDN----SSSSTQEKQNNFERKRNSFMGFGKDKSNYKDSAKKDDNNEMERPQPVHT 276 Query: 294 --LSFENVTDRPPDVPRKIIVGRVLNYENPSRGSSNSN----NLDLKGESNSSLSTPLDK 347 ++ + +T++ + +KIIVGR L ++ S +++ N + +S S T +D Sbjct: 277 VVMASDTLTEKLHEGCKKIIVGRPLLKQSDSLSKASTTDCQANSHCQCDSQGSRITSVDD 336 Query: 348 -------------KDTRRSSSSSQISPEHRKKSALIRGPVLNIDHSLNGSDKATLYSSLR 394 ++ + ++ + E RKK+ALIRGPVLN+DH L +++ATLY+ L+ Sbjct: 337 DVLVNPESCNDAVNNSNNNKENTFPTSEQRKKAALIRGPVLNVDHLLYPTEEATLYNGLK 396 Query: 395 DIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLLNELSEYIERENK 454 DIFE ITEN LTG+VSP+ FV +LK+ENVLFNT M QDAHEF NFLLN+ SEYI+R N Sbjct: 397 DIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSEYIQRNNP 456 Query: 455 KIAASDINSDSEPSKSKNFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEET 514 ++ +D+ + NFI+DLF+GTLTN+IKCLTCDNITSRDEPFLDFPIEVQGDEET Sbjct: 457 RMRFGPQKTDNS---NDNFITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEET 513 Query: 515 DIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNC 574 DIQ++LKSYHQREMLNG NKFYC++C GLQEAER+VGLKQLP L+LHLKRFKYSE+Q Sbjct: 514 DIQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKS 573 Query: 575 NIKLFNNIHYPLTLNVCSSINSKVCQKYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLF 634 NIKLFN I YPLTL+V S+ N+ V +KYEL+G+V+HMG GPQHGHYV +C++EKFGWLL+ Sbjct: 574 NIKLFNKILYPLTLDVSSTFNTSVYKKYELSGVVIHMGSGPQHGHYVCICRNEKFGWLLY 633 Query: 635 DDETVEAVKEETVLEFTGESPNMATAYVLFYKAMYSNAVEKNDRENM------AKEQDDN 688 DDETVE++KEETVL+FTG + TAYVLFYK ++ E N EN+ + D+N Sbjct: 634 DDETVESIKEETVLQFTGHPGDQTTAYVLFYKETQADKTE-NQNENIDTSSQDQMQTDNN 692 Query: 689 IDNLIKYDDWLR----TCNSGQKKKEELPIADDLDTAIDDSFVSNTPIKSSKKKSRMFSF 744 I+ LIK DDWLR + ++K+ L ++ TA + +++ K+KSR+ SF Sbjct: 693 IEQLIKCDDWLRDRKLRAAANIERKKTLGNIPEVKTAETKTPLNDKKRNKQKRKSRILSF 752 Query: 745 RK 746 K Sbjct: 753 IK 754 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.312 0.131 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,120,075 Number of Sequences: 6497 Number of extensions: 263067 Number of successful extensions: 1136 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1131 Number of HSP's gapped (non-prelim): 2 length of query: 747 length of database: 2,996,526 effective HSP length: 98 effective length of query: 649 effective length of database: 2,359,820 effective search space: 1531523180 effective search space used: 1531523180 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR157C Annotated|02:554304:553537| frame 5; YBR157C/ICS2; Verified; this gene contains 1 exon (255 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR157C ICS2 SGDID:S0000361, Chr II from 553947-554267, reverse ... 180 2e-46 >YBR157C ICS2 SGDID:S0000361, Chr II from 553947-554267, reverse complement Length = 106 Score = 180 bits (457), Expect = 2e-46 Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 MGKFEQKERERISTFSFPTTGSQSSTSIKSLGSPLYGRFSSLSSTESQFDSSKQPHEYEK 60 MGKFEQKERERISTFSFPTTGSQSSTSIKSLGSPLYGRFSSLSSTESQFDSSKQPHEYEK Sbjct: 1 MGKFEQKERERISTFSFPTTGSQSSTSIKSLGSPLYGRFSSLSSTESQFDSSKQPHEYEK 60 Query: 61 SFYFEESQGEALFNKLKTYSFPGDKDGVK 89 SFYFEESQGEALFNKLKTYSFPGDKDGVK Sbjct: 61 SFYFEESQGEALFNKLKTYSFPGDKDGVK 89 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.310 0.126 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,626,988 Number of Sequences: 6497 Number of extensions: 73474 Number of successful extensions: 408 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 407 Number of HSP's gapped (non-prelim): 1 length of query: 255 length of database: 2,996,526 effective HSP length: 88 effective length of query: 167 effective length of database: 2,424,790 effective search space: 404939930 effective search space used: 404939930 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR269C Annotated|02:742571:742155| frame 6; YBR269C; Uncharacterized; this gene contains 1 exon (138 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR269C YBR269C SGDID:S0000473, Chr II from 742140-742532, rever... 243 6e-66 >YBR269C YBR269C SGDID:S0000473, Chr II from 742140-742532, reverse complement Length = 130 Score = 243 bits (621), Expect = 6e-66 Identities = 119/121 (98%), Positives = 120/121 (99%) Query: 1 MLCAIKSTGYRYPRTGALNLLRGRPFNMATRKITTERIPGPPKLPREEQEEFERLQRIAT 60 MLCAIKSTGYRYPRTGALNLLRGRPFNMATRKITTERIPGPPKLPREEQEEFERLQRIAT Sbjct: 1 MLCAIKSTGYRYPRTGALNLLRGRPFNMATRKITTERIPGPPKLPREEQEEFERLQRIAT 60 Query: 61 SQEAIDQYNAQATGDRTKESLNSPLLTKNDIGSFSPEFSKTIPEFEGDVNPKTGEVGGPK 120 SQEAIDQYNAQATGDRTKESLNSPLLTKNDIGSFSPEFSKTIPEFEGDVNPKTGEVGGP Sbjct: 61 SQEAIDQYNAQATGDRTKESLNSPLLTKNDIGSFSPEFSKTIPEFEGDVNPKTGEVGGPS 120 Query: 121 Q 121 + Sbjct: 121 R 121 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 880,342 Number of Sequences: 6497 Number of extensions: 37516 Number of successful extensions: 87 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86 Number of HSP's gapped (non-prelim): 1 length of query: 138 length of database: 2,996,526 effective HSP length: 81 effective length of query: 57 effective length of database: 2,470,269 effective search space: 140805333 effective search space used: 140805333 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 318 (127.1 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YBR086C Annotated|02:423035:420195| frame 6; YBR086C/IST2; Verified; this gene contains 1 exon (946 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YBR086C IST2 SGDID:S0000290, Chr II from 420159-422999, reverse ... 1881 0.0 >YBR086C IST2 SGDID:S0000290, Chr II from 420159-422999, reverse complement Length = 946 Score = 1881 bits (4873), Expect = 0.0 Identities = 945/946 (99%), Positives = 945/946 (99%) Query: 1 MSQTITSLDPNCVIVFNKTSSANEKSLNVEFKRLNIHSIIEPGHDLQTSYAFIRIHQDNA 60 MSQTITSLDPNCVIVFNKTSSANEKSLNVEFKRLNIHSIIEPGHDLQTSYAFIRIHQDNA Sbjct: 1 MSQTITSLDPNCVIVFNKTSSANEKSLNVEFKRLNIHSIIEPGHDLQTSYAFIRIHQDNA 60 Query: 61 KPLFSFLQNLDFIESIIPYHDTELSDDLHKLISISKSKILEAPKQYELYNLSNLTNNPKQ 120 KPLFSFLQNLDFIESIIPYHDTELSDDLHKLISISKSKILEAPKQYELYNLSNLTNNPKQ Sbjct: 61 KPLFSFLQNLDFIESIIPYHDTELSDDLHKLISISKSKILEAPKQYELYNLSNLTNNPKQ 120 Query: 121 SLYFAFLQNYIKWLIPFSFFGLSIRFLSNFTYEFNSTYSLFAILWTLSFTAFWLYKYEPF 180 SLYFAFLQNYIKWLIPFSFFGLSIRFLSNFTYEFNSTYSLFAILWTLSFTAFWLYKYEPF Sbjct: 121 SLYFAFLQNYIKWLIPFSFFGLSIRFLSNFTYEFNSTYSLFAILWTLSFTAFWLYKYEPF 180 Query: 181 WSDRLSKYSSFSTIEFLQDKQKAQKKASSVIMLKKCCFIPVALLFGAILLSFQLYCFALE 240 WSDRLSKYSSFSTIEFLQDKQKAQKKASSVIMLKKCCFIPVALLFGAILLSFQLYCFALE Sbjct: 181 WSDRLSKYSSFSTIEFLQDKQKAQKKASSVIMLKKCCFIPVALLFGAILLSFQLYCFALE 240 Query: 241 IFIKQIYNGPMISILSFLPTILICTFTPVLTVIYNKYFVEPMTKWENHSSVVNAKKSKEA 300 IF KQIYNGPMISILSFLPTILICTFTPVLTVIYNKYFVEPMTKWENHSSVVNAKKSKEA Sbjct: 241 IFYKQIYNGPMISILSFLPTILICTFTPVLTVIYNKYFVEPMTKWENHSSVVNAKKSKEA 300 Query: 301 KNFVIIFLSSYVPLLITLFLYLPMGHLLTAEIRTKVFNAFSILARLPTHDSDFIIDTKRY 360 KNFVIIFLSSYVPLLITLFLYLPMGHLLTAEIRTKVFNAFSILARLPTHDSDFIIDTKRY Sbjct: 301 KNFVIIFLSSYVPLLITLFLYLPMGHLLTAEIRTKVFNAFSILARLPTHDSDFIIDTKRY 360 Query: 361 EDQFFYFIVINQLIQFSMENFVPSLVSIAQQKINGPNPNFVKAESEIGKAQLSSSDMKIW 420 EDQFFYFIVINQLIQFSMENFVPSLVSIAQQKINGPNPNFVKAESEIGKAQLSSSDMKIW Sbjct: 361 EDQFFYFIVINQLIQFSMENFVPSLVSIAQQKINGPNPNFVKAESEIGKAQLSSSDMKIW 420 Query: 421 SKVKSYQTDPWGATFDLDANFKKLLLQFGYLVMFSTIWPLAPFICLIVNLIVYQVDLRKA 480 SKVKSYQTDPWGATFDLDANFKKLLLQFGYLVMFSTIWPLAPFICLIVNLIVYQVDLRKA Sbjct: 421 SKVKSYQTDPWGATFDLDANFKKLLLQFGYLVMFSTIWPLAPFICLIVNLIVYQVDLRKA 480 Query: 481 VLYSKPEYFPFPIYDKPSSVSNTQKLTVGLWNSVLVMFSILGCVITATLTYMYQSCNIPG 540 VLYSKPEYFPFPIYDKPSSVSNTQKLTVGLWNSVLVMFSILGCVITATLTYMYQSCNIPG Sbjct: 481 VLYSKPEYFPFPIYDKPSSVSNTQKLTVGLWNSVLVMFSILGCVITATLTYMYQSCNIPG 540 Query: 541 VGAHTSIHTNKAWYLANPINHSWINIVLYAVFIEHVSVAIFFLFSSILKSSHDDVANGIV 600 VGAHTSIHTNKAWYLANPINHSWINIVLYAVFIEHVSVAIFFLFSSILKSSHDDVANGIV Sbjct: 541 VGAHTSIHTNKAWYLANPINHSWINIVLYAVFIEHVSVAIFFLFSSILKSSHDDVANGIV 600 Query: 601 PKHVVNVQNPPKQEVFEKIPSPEFNSNNEKELVQRKGSANEKLHQELGEKQPASSANGYE 660 PKHVVNVQNPPKQEVFEKIPSPEFNSNNEKELVQRKGSANEKLHQELGEKQPASSANGYE Sbjct: 601 PKHVVNVQNPPKQEVFEKIPSPEFNSNNEKELVQRKGSANEKLHQELGEKQPASSANGYE 660 Query: 661 AHAATHANNDPSSLSSASSPSLSSSSSSSKTGVVKAVDNDTAGSAGKKPLATESTEKRNS 720 AHAATHANNDPSSLSSASSPSLSSSSSSSKTGVVKAVDNDTAGSAGKKPLATESTEKRNS Sbjct: 661 AHAATHANNDPSSLSSASSPSLSSSSSSSKTGVVKAVDNDTAGSAGKKPLATESTEKRNS 720 Query: 721 LVKVPTVGSYGVAGATLPETIPTSKNYYLRFDEDGKSIRDAKSSAESSNATNNNTLGTES 780 LVKVPTVGSYGVAGATLPETIPTSKNYYLRFDEDGKSIRDAKSSAESSNATNNNTLGTES Sbjct: 721 LVKVPTVGSYGVAGATLPETIPTSKNYYLRFDEDGKSIRDAKSSAESSNATNNNTLGTES 780 Query: 781 KLLPDGDAVDALSRKIDQIPKIAVTGGENNENTQAKDDAATKTPLIKDANIKPVVNAAVN 840 KLLPDGDAVDALSRKIDQIPKIAVTGGENNENTQAKDDAATKTPLIKDANIKPVVNAAVN Sbjct: 781 KLLPDGDAVDALSRKIDQIPKIAVTGGENNENTQAKDDAATKTPLIKDANIKPVVNAAVN 840 Query: 841 DNQSKVSVATEQTKKTEVSTKNGPSRSISTKETKDSARPSNNNTTTTTTTDATQPHHHHH 900 DNQSKVSVATEQTKKTEVSTKNGPSRSISTKETKDSARPSNNNTTTTTTTDATQPHHHHH Sbjct: 841 DNQSKVSVATEQTKKTEVSTKNGPSRSISTKETKDSARPSNNNTTTTTTTDATQPHHHHH 900 Query: 901 HHRHRDAGVKNVTNNSKTTESSSSSSAAKEKPKHKKGLLHKLKKKL 946 HHRHRDAGVKNVTNNSKTTESSSSSSAAKEKPKHKKGLLHKLKKKL Sbjct: 901 HHRHRDAGVKNVTNNSKTTESSSSSSAAKEKPKHKKGLLHKLKKKL 946 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.316 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,053,338 Number of Sequences: 6497 Number of extensions: 292093 Number of successful extensions: 3625 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3614 Number of HSP's gapped (non-prelim): 1 length of query: 946 length of database: 2,996,526 effective HSP length: 100 effective length of query: 846 effective length of database: 2,346,826 effective search space: 1985414796 effective search space used: 1985414796 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YCL008C Annotated|03:106852:105695| frame 5; YCL008C/STP22; Verified; this gene contains 1 exon (385 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YCL008C STP22 SGDID:S0000514, Chr III from 105959-106849, revers... 602 e-173 >YCL008C STP22 SGDID:S0000514, Chr III from 105959-106849, reverse complement Length = 296 Score = 602 bits (1553), Expect = e-173 Identities = 293/293 (100%), Positives = 293/293 (100%) Query: 1 MSANGKISVPEAVVNWLFKVIQPIYNDGRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQ 60 MSANGKISVPEAVVNWLFKVIQPIYNDGRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQ Sbjct: 1 MSANGKISVPEAVVNWLFKVIQPIYNDGRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQ 60 Query: 61 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI 120 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI Sbjct: 61 LLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI 120 Query: 121 DSNGWIALPILHCWDPAAMNLIMVVQELMSLLHEPPQDQAPSLPPKPNTQLQQEQNTPPL 180 DSNGWIALPILHCWDPAAMNLIMVVQELMSLLHEPPQDQAPSLPPKPNTQLQQEQNTPPL Sbjct: 121 DSNGWIALPILHCWDPAAMNLIMVVQELMSLLHEPPQDQAPSLPPKPNTQLQQEQNTPPL 180 Query: 181 PPKPKSPHLKPPLPPPPPPQPASNALDLMDMDNTDISPTNHHEMLQNLQTVVNELYREDV 240 PPKPKSPHLKPPLPPPPPPQPASNALDLMDMDNTDISPTNHHEMLQNLQTVVNELYREDV Sbjct: 181 PPKPKSPHLKPPLPPPPPPQPASNALDLMDMDNTDISPTNHHEMLQNLQTVVNELYREDV 240 Query: 241 DYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVL 293 DYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVL Sbjct: 241 DYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVL 293 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,480,369 Number of Sequences: 6497 Number of extensions: 119253 Number of successful extensions: 942 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 935 Number of HSP's gapped (non-prelim): 1 length of query: 385 length of database: 2,996,526 effective HSP length: 92 effective length of query: 293 effective length of database: 2,398,802 effective search space: 702848986 effective search space used: 702848986 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR007W Annotated|04:461839:462513| frame 1; YDR007W/TRP1; Verified; this gene contains 1 exon (224 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR007W TRP1 SGDID:S0002414 TRPF_YEAST N-(5'-phosphoribosyl)ant... 449 e-127 >YDR007W TRP1 SGDID:S0002414 TRPF_YEAST N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24) (PRAI) - Saccharomyces cerevisiae (Baker's yeast). Length = 224 Score = 449 bits (1155), Expect = e-127 Identities = 223/224 (99%), Positives = 224/224 (100%) Query: 1 MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISSLV 60 MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKIS+LV Sbjct: 1 MSVINFTGSSGPLVKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISTLV 60 Query: 61 KAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDESWQEYQEFLGLPVIKRL 120 KAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDESWQEYQEFLGLPVIKRL Sbjct: 61 KAYKNSSGTPKYLVGVFRNQPKEDVLALVNDYGIDIVQLHGDESWQEYQEFLGLPVIKRL 120 Query: 121 VFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGG 180 VFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGG Sbjct: 121 VFPKDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGG 180 Query: 181 LTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAKK 224 LTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAKK Sbjct: 181 LTPENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAKK 224 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.316 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,401,658 Number of Sequences: 6497 Number of extensions: 61379 Number of successful extensions: 134 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133 Number of HSP's gapped (non-prelim): 1 length of query: 224 length of database: 2,996,526 effective HSP length: 87 effective length of query: 137 effective length of database: 2,431,287 effective search space: 333086319 effective search space used: 333086319 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR031W Annotated|04:503494:503859| frame 1; YDR031W; Uncharacterized; this gene contains 1 exon (121 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR031W YDR031W SGDID:S0002438, Chr IV from 503493-503846 243 7e-66 >YDR031W YDR031W SGDID:S0002438, Chr IV from 503493-503846 Length = 117 Score = 243 bits (619), Expect = 7e-66 Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 1 MSDILDEIVIEDVVANCPQEFLQYHKCIRDNEENPGKCKDGRMILSTCIREKVPSVKSIM 60 MSDILDEIVIEDVVANCPQEFLQYHKCIRDNEENPGKCKDGRMILSTCIREKVPSVKSIM Sbjct: 1 MSDILDEIVIEDVVANCPQEFLQYHKCIRDNEENPGKCKDGRMILSTCIREKVPSVKSIM 60 Query: 61 SECSEPMKKYDQCIRDNMGTRTINENCLGFLQDLRKCAELQVKNKNIKPSINGVNL 116 SECSEPMKKYDQCIRDNMGTRTINENCLGFLQDLRKCAELQVKNKNIKPSINGVNL Sbjct: 61 SECSEPMKKYDQCIRDNMGTRTINENCLGFLQDLRKCAELQVKNKNIKPSINGVNL 116 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 773,628 Number of Sequences: 6497 Number of extensions: 30841 Number of successful extensions: 78 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75 Number of HSP's gapped (non-prelim): 1 length of query: 121 length of database: 2,996,526 effective HSP length: 79 effective length of query: 42 effective length of database: 2,483,263 effective search space: 104297046 effective search space used: 104297046 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 316 (126.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR494W Annotated|04:1436920:1438005| frame 1; YDR494W; Uncharacterized; this gene contains 1 exon (361 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR494W RSM28 SGDID:S0002902, Chr IV from 1436917-1437783 540 e-154 >YDR494W RSM28 SGDID:S0002902, Chr IV from 1436917-1437783 Length = 288 Score = 540 bits (1392), Expect = e-154 Identities = 271/271 (100%), Positives = 271/271 (100%) Query: 1 MRSSMFRCVSRAHYSTSVTEDFINSILARAQEATAKASSNALKLDKMKEGRMQNKRRNGN 60 MRSSMFRCVSRAHYSTSVTEDFINSILARAQEATAKASSNALKLDKMKEGRMQNKRRNGN Sbjct: 1 MRSSMFRCVSRAHYSTSVTEDFINSILARAQEATAKASSNALKLDKMKEGRMQNKRRNGN 60 Query: 61 QNRNSMNNKESRGREGNQGERNMRLKNRSSDSVRANKQQWNKGANTSFVKNPTGNTVVMQ 120 QNRNSMNNKESRGREGNQGERNMRLKNRSSDSVRANKQQWNKGANTSFVKNPTGNTVVMQ Sbjct: 61 QNRNSMNNKESRGREGNQGERNMRLKNRSSDSVRANKQQWNKGANTSFVKNPTGNTVVMQ 120 Query: 121 PQFKKMQNGKNNLKGDARVEDDLLDVFNSSMEQKPVNFNGTPKSKARFQKKSHILTASKR 180 PQFKKMQNGKNNLKGDARVEDDLLDVFNSSMEQKPVNFNGTPKSKARFQKKSHILTASKR Sbjct: 121 PQFKKMQNGKNNLKGDARVEDDLLDVFNSSMEQKPVNFNGTPKSKARFQKKSHILTASKR 180 Query: 181 RKAPQQQLQKVIKRPVSSEYVLEEPTPLSLLEYTPQVFPTKESRLVNFTLDSLKKSNYPI 240 RKAPQQQLQKVIKRPVSSEYVLEEPTPLSLLEYTPQVFPTKESRLVNFTLDSLKKSNYPI Sbjct: 181 RKAPQQQLQKVIKRPVSSEYVLEEPTPLSLLEYTPQVFPTKESRLVNFTLDSLKKSNYPI 240 Query: 241 YRSPNLGILKVHDFTLNTPNFGKYTPGSSLI 271 YRSPNLGILKVHDFTLNTPNFGKYTPGSSLI Sbjct: 241 YRSPNLGILKVHDFTLNTPNFGKYTPGSSLI 271 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.311 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,291,857 Number of Sequences: 6497 Number of extensions: 113018 Number of successful extensions: 914 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 913 Number of HSP's gapped (non-prelim): 1 length of query: 361 length of database: 2,996,526 effective HSP length: 92 effective length of query: 269 effective length of database: 2,398,802 effective search space: 645277738 effective search space used: 645277738 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 323 (129.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR179W-A Annotated|04:819428:820819| frame 2; YDR179W-A; Uncharacterized; this gene contains 1 exon (463 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR179W-A YDR179W-A SGDID:S0002587, Chr IV from 820010-820816 543 e-155 >YDR179W-A YDR179W-A SGDID:S0002587, Chr IV from 820010-820816 Length = 268 Score = 543 bits (1398), Expect = e-155 Identities = 268/268 (100%), Positives = 268/268 (100%) Query: 196 MLFTEIIQSKMSTKSLLQRSFLDSFLNELVFGHIFNSIAEPYYLLEGLNKICIRIKLNSA 255 MLFTEIIQSKMSTKSLLQRSFLDSFLNELVFGHIFNSIAEPYYLLEGLNKICIRIKLNSA Sbjct: 1 MLFTEIIQSKMSTKSLLQRSFLDSFLNELVFGHIFNSIAEPYYLLEGLNKICIRIKLNSA 60 Query: 256 GNTRNEVTHGKPKCDPWLFVSNVKHKILQMTRLLAYSTSTEAANMNTAEIQETAFLQRYI 315 GNTRNEVTHGKPKCDPWLFVSNVKHKILQMTRLLAYSTSTEAANMNTAEIQETAFLQRYI Sbjct: 61 GNTRNEVTHGKPKCDPWLFVSNVKHKILQMTRLLAYSTSTEAANMNTAEIQETAFLQRYI 120 Query: 316 FTFFTDDFFKLSMRKPFLFSICRTLQHWISKLNALNRVMYRTFDNIVQTKITSPVTIGNL 375 FTFFTDDFFKLSMRKPFLFSICRTLQHWISKLNALNRVMYRTFDNIVQTKITSPVTIGNL Sbjct: 121 FTFFTDDFFKLSMRKPFLFSICRTLQHWISKLNALNRVMYRTFDNIVQTKITSPVTIGNL 180 Query: 376 FSLLRHSLFPNDNMMGPPRVLPVGDAFLEFREECISNLWDVCMTYKLDHILAIKRSDIAD 435 FSLLRHSLFPNDNMMGPPRVLPVGDAFLEFREECISNLWDVCMTYKLDHILAIKRSDIAD Sbjct: 181 FSLLRHSLFPNDNMMGPPRVLPVGDAFLEFREECISNLWDVCMTYKLDHILAIKRSDIAD 240 Query: 436 LIICISKNRDCNKLLIYRIIDCVIAQLP 463 LIICISKNRDCNKLLIYRIIDCVIAQLP Sbjct: 241 LIICISKNRDCNKLLIYRIIDCVIAQLP 268 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.323 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,899,170 Number of Sequences: 6497 Number of extensions: 130321 Number of successful extensions: 382 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 381 Number of HSP's gapped (non-prelim): 1 length of query: 463 length of database: 2,996,526 effective HSP length: 94 effective length of query: 369 effective length of database: 2,385,808 effective search space: 880363152 effective search space used: 880363152 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDL127W Annotated|04:234927:235853| frame 3; YDL127W/PCL2; Verified; this gene contains 1 exon (308 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDL127W PCL2 SGDID:S0002285, Chr IV from 234927-235766 514 e-147 YDL179W PCL9 SGDID:S0002338, Chr IV from 138292-139206 268 6e-73 YNL289W PCL1 SGDID:S0005233, Chr XIV from 87895-88734 151 1e-37 >YDL127W PCL2 SGDID:S0002285, Chr IV from 234927-235766 Length = 279 Score = 514 bits (1325), Expect = e-147 Identities = 262/262 (100%), Positives = 262/262 (100%) Query: 1 MSNYEALLKFNRKAVSKEMVQYLASTTASIIKIKKTNSMIDIALPAPPLTKFINRLIKHS 60 MSNYEALLKFNRKAVSKEMVQYLASTTASIIKIKKTNSMIDIALPAPPLTKFINRLIKHS Sbjct: 1 MSNYEALLKFNRKAVSKEMVQYLASTTASIIKIKKTNSMIDIALPAPPLTKFINRLIKHS 60 Query: 61 NVQTPTLMATSVYLAKLRSIIPSNVYGIETTRHRIFLGCLILAAKTLNDSSPLNKHWAEY 120 NVQTPTLMATSVYLAKLRSIIPSNVYGIETTRHRIFLGCLILAAKTLNDSSPLNKHWAEY Sbjct: 61 NVQTPTLMATSVYLAKLRSIIPSNVYGIETTRHRIFLGCLILAAKTLNDSSPLNKHWAEY 120 Query: 121 TDGLLILREVNTIERELLEYFDWDVTISTDDLITCLSPFLKPIKEEQLYKSQRDCRTLKN 180 TDGLLILREVNTIERELLEYFDWDVTISTDDLITCLSPFLKPIKEEQLYKSQRDCRTLKN Sbjct: 121 TDGLLILREVNTIERELLEYFDWDVTISTDDLITCLSPFLKPIKEEQLYKSQRDCRTLKN 180 Query: 181 FSAQEKDIVNKTSISHSRSSSNMSIPSLASTSTLSTLESRRSNLSNYSNRIRTLPELHES 240 FSAQEKDIVNKTSISHSRSSSNMSIPSLASTSTLSTLESRRSNLSNYSNRIRTLPELHES Sbjct: 181 FSAQEKDIVNKTSISHSRSSSNMSIPSLASTSTLSTLESRRSNLSNYSNRIRTLPELHES 240 Query: 241 NNISDKFSPRTYNIDSKHDNKE 262 NNISDKFSPRTYNIDSKHDNKE Sbjct: 241 NNISDKFSPRTYNIDSKHDNKE 262 >YDL179W PCL9 SGDID:S0002338, Chr IV from 138292-139206 Length = 304 Score = 268 bits (686), Expect = 6e-73 Identities = 159/311 (51%), Positives = 212/311 (68%), Gaps = 13/311 (4%) Query: 1 MSNYEALLKFNRKAVSKEMVQYLASTTASIIKIKKTNSMIDIALPAPPLTKFINRLIKHS 60 +S+Y+ALL+FN+K VS+EM+Q+LA++TASIIKI++ N+ I P P L+ FI ++ S Sbjct: 2 ISDYDALLQFNKKPVSQEMIQFLATSTASIIKIRENNNPIQGCRP-PDLSIFIKNVVIQS 60 Query: 61 NVQTPTLMATSVYLAKLRSIIPSNVYGIETTRHRIFLGCLILAAKTLNDSSPLNKHWAEY 120 NVQTPTLMATSVYL KL+S+IP NVYGI TTRHRIFLGCLILAAKTLNDSSP NKHW Y Sbjct: 61 NVQTPTLMATSVYLNKLKSVIPKNVYGINTTRHRIFLGCLILAAKTLNDSSPWNKHWTTY 120 Query: 121 TDGLLILREVNTIERELLEYFDWDVTISTDDLITCLSPFLKPIKEEQLYKSQRDCRTLKN 180 T+GLL +REVNTIERELLEY +WDV I+T DLI LS FL PIK EQL+ +R L N Sbjct: 121 TEGLLRIREVNTIERELLEYLNWDVRITTPDLIDSLSYFLGPIK-EQLFLQRRQEMLLFN 179 Query: 181 FSA--QEKDIVN-KTSISHSRSSSNMSIPSLASTSTLSTLESRRSNLSNYSNRIRTLPEL 237 + Q K+ +N + +SHSR+SS +S+PSL S +T+ST +SR S L+ Y +LP L Sbjct: 180 APSPGQLKEYINHRRPVSHSRTSSAISVPSLTSMATVSTTDSRSSLLAKYQ---PSLP-L 235 Query: 238 HESNNISDK-FSPRTYNIDSKHDNKENRPIPTIKPFNFSKARPVILKTGLNKQIIKEDTK 296 ES+N + K P N D ++ + I ++ + + ++ +K I + Sbjct: 236 VESDNFNKKNHVPLRNNNDICNNFRAEENIHSVNHIDVTMGSSPVMS---HKPTIHQRLN 292 Query: 297 VKKSNWSNYFK 307 + WS++FK Sbjct: 293 FTRRGWSSFFK 303 >YNL289W PCL1 SGDID:S0005233, Chr XIV from 87895-88734 Length = 279 Score = 151 bits (381), Expect = 1e-37 Identities = 93/254 (36%), Positives = 147/254 (57%), Gaps = 25/254 (9%) Query: 12 RKAVSKEMVQYLASTTASIIKIKKTNSMIDIALPA-------PPLTKFINRLIKHSNVQT 64 + V+ +++++L TT ++ +N P P L FI RL++++NV T Sbjct: 13 KSPVTDDIIKFLTDTTLRVVP--SSNYPTPPGSPGEKHLTRLPSLMTFITRLVRYTNVYT 70 Query: 65 PTLMATSVYLAKLRSIIPSNVYGIETTRHRIFLGCLILAAKTLNDSSPLNKHWAEYTDGL 124 PTL+ + YL KL+ I+P + G+ +T HRIFL CLIL+AK NDSSPLNKHWA YTDGL Sbjct: 71 PTLLTAACYLNKLKRILPRDATGLPSTIHRIFLACLILSAKFHNDSSPLNKHWARYTDGL 130 Query: 125 LILREVNTIERELLEYFDWDVTISTDDLITCLSPFLKPIKEEQLYKSQRDCRTLKNFSAQ 184 L ++N +ER+LL+ +WD+ ++T+DLI L P L+PIK++ S + R S Sbjct: 131 FTLEDINLMERQLLQLLNWDLRVNTEDLILDLQPLLEPIKQDLARSSDQRKRINMMMSMN 190 Query: 185 EKDIVNKTSI-SHSR-----SSSNMSIPSLASTSTL--STLESRR----SNLSN----YS 228 + + I S++R N+SI S S++TL S + RR +N++N + Sbjct: 191 RRTCAGTSPIRSNNRFKLYEKQRNVSIASDLSSATLVDSCNDLRRLKDVTNIANNTVANT 250 Query: 229 NRIRTLPELHESNN 242 N +RT+ + +++ N Sbjct: 251 NYVRTVEKWNDNVN 264 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.315 0.129 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,932,060 Number of Sequences: 6497 Number of extensions: 88495 Number of successful extensions: 617 Number of sequences better than 1.0e-30: 3 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 612 Number of HSP's gapped (non-prelim): 3 length of query: 308 length of database: 2,996,526 effective HSP length: 90 effective length of query: 218 effective length of database: 2,411,796 effective search space: 525771528 effective search space used: 525771528 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR325W Annotated|04:1117119:1120226| frame 3; YDR325W/YCG1; Verified; this gene contains 1 exon (1035 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR325W YCG1 SGDID:S0002733, Chr IV from 1117069-1120224 2023 0.0 >YDR325W YCG1 SGDID:S0002733, Chr IV from 1117069-1120224 Length = 1051 Score = 2023 bits (5242), Expect = 0.0 Identities = 1035/1035 (100%), Positives = 1035/1035 (100%) Query: 1 MQDPDGIDINTKIFNSVAEVFQKAQGSYAGHRKHIAVLKKIQSKAVEQGYEDAFNFWFDK 60 MQDPDGIDINTKIFNSVAEVFQKAQGSYAGHRKHIAVLKKIQSKAVEQGYEDAFNFWFDK Sbjct: 17 MQDPDGIDINTKIFNSVAEVFQKAQGSYAGHRKHIAVLKKIQSKAVEQGYEDAFNFWFDK 76 Query: 61 LVTKILPLKKNEIIGDRIVKLVAAFIASLERELILAKKQNYKLTNDEEGIFSRFVDQFIR 120 LVTKILPLKKNEIIGDRIVKLVAAFIASLERELILAKKQNYKLTNDEEGIFSRFVDQFIR Sbjct: 77 LVTKILPLKKNEIIGDRIVKLVAAFIASLERELILAKKQNYKLTNDEEGIFSRFVDQFIR 136 Query: 121 HVLRGVESPDKNVRFRVLQLLAVIMDNIGEIDESLFNLLILSLNKRIYDREPTVRIQAVF 180 HVLRGVESPDKNVRFRVLQLLAVIMDNIGEIDESLFNLLILSLNKRIYDREPTVRIQAVF Sbjct: 137 HVLRGVESPDKNVRFRVLQLLAVIMDNIGEIDESLFNLLILSLNKRIYDREPTVRIQAVF 196 Query: 181 CLTKFQDEEQTEHLTELSDNEENFEATRTLVASIQNDPSAEVRRAAMLNLINDNNTRPYI 240 CLTKFQDEEQTEHLTELSDNEENFEATRTLVASIQNDPSAEVRRAAMLNLINDNNTRPYI Sbjct: 197 CLTKFQDEEQTEHLTELSDNEENFEATRTLVASIQNDPSAEVRRAAMLNLINDNNTRPYI 256 Query: 241 LERARDVNIVNRRLVYSRILKSMGRKCFDDIEPHIFDQLIEWGLEDRELSVRNACKRLIA 300 LERARDVNIVNRRLVYSRILKSMGRKCFDDIEPHIFDQLIEWGLEDRELSVRNACKRLIA Sbjct: 257 LERARDVNIVNRRLVYSRILKSMGRKCFDDIEPHIFDQLIEWGLEDRELSVRNACKRLIA 316 Query: 301 HDWLNALDGDLIELLEKLDVSRSSVCVKAIEALFQSRPDILSKIKFPESIWKDFTVEIAF 360 HDWLNALDGDLIELLEKLDVSRSSVCVKAIEALFQSRPDILSKIKFPESIWKDFTVEIAF Sbjct: 317 HDWLNALDGDLIELLEKLDVSRSSVCVKAIEALFQSRPDILSKIKFPESIWKDFTVEIAF 376 Query: 361 LFRAIYLYCLDNNITEMLEENFPEASKLSEHLNHYILLRYHHNDISNDSQSHFDYNTLEF 420 LFRAIYLYCLDNNITEMLEENFPEASKLSEHLNHYILLRYHHNDISNDSQSHFDYNTLEF Sbjct: 377 LFRAIYLYCLDNNITEMLEENFPEASKLSEHLNHYILLRYHHNDISNDSQSHFDYNTLEF 436 Query: 421 IIEQLSIAAERYDYSDEVGRRSMLTVVRNMLALTTLSEPLIKIGIRVMKSLSINEKDFVT 480 IIEQLSIAAERYDYSDEVGRRSMLTVVRNMLALTTLSEPLIKIGIRVMKSLSINEKDFVT Sbjct: 437 IIEQLSIAAERYDYSDEVGRRSMLTVVRNMLALTTLSEPLIKIGIRVMKSLSINEKDFVT 496 Query: 481 MAIEIINDIRDDDIEKQEQEEKIKSKKINRRNETSVDEEDENGTHNDEVNEDEEDDNISS 540 MAIEIINDIRDDDIEKQEQEEKIKSKKINRRNETSVDEEDENGTHNDEVNEDEEDDNISS Sbjct: 497 MAIEIINDIRDDDIEKQEQEEKIKSKKINRRNETSVDEEDENGTHNDEVNEDEEDDNISS 556 Query: 541 FHSAVENLVQGNGNVSESDIINNLPPEKEASSATIVLCLTRSSYMLELVNTPLTENILIA 600 FHSAVENLVQGNGNVSESDIINNLPPEKEASSATIVLCLTRSSYMLELVNTPLTENILIA Sbjct: 557 FHSAVENLVQGNGNVSESDIINNLPPEKEASSATIVLCLTRSSYMLELVNTPLTENILIA 616 Query: 601 SLMDTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVSKGNASLKYIAL 660 SLMDTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVSKGNASLKYIAL Sbjct: 617 SLMDTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVSKGNASLKYIAL 676 Query: 661 QVIVDIFSVHGNTVVDGEGKVDSISLHKIFYKVLKNNGLPECQVIAAEGLCKLFLADVFT 720 QVIVDIFSVHGNTVVDGEGKVDSISLHKIFYKVLKNNGLPECQVIAAEGLCKLFLADVFT Sbjct: 677 QVIVDIFSVHGNTVVDGEGKVDSISLHKIFYKVLKNNGLPECQVIAAEGLCKLFLADVFT 736 Query: 721 DDDLFETLVLSYFSPINSSNEALVQAFAFCIPVYCFSHPAHQQRMSRTAADILLRLCVLW 780 DDDLFETLVLSYFSPINSSNEALVQAFAFCIPVYCFSHPAHQQRMSRTAADILLRLCVLW Sbjct: 737 DDDLFETLVLSYFSPINSSNEALVQAFAFCIPVYCFSHPAHQQRMSRTAADILLRLCVLW 796 Query: 781 DDLQSSVIPEVDREAMLKPNIIFQQLLFWTDPRNLVNQTGSTKKDTVQLTFLIDVLKIYA 840 DDLQSSVIPEVDREAMLKPNIIFQQLLFWTDPRNLVNQTGSTKKDTVQLTFLIDVLKIYA Sbjct: 797 DDLQSSVIPEVDREAMLKPNIIFQQLLFWTDPRNLVNQTGSTKKDTVQLTFLIDVLKIYA 856 Query: 841 QIEKKEIKKMIITNINAIFLSSEQDYSTLKELLEYSDDIAENDNLDNVSKNALDKLRNNL 900 QIEKKEIKKMIITNINAIFLSSEQDYSTLKELLEYSDDIAENDNLDNVSKNALDKLRNNL Sbjct: 857 QIEKKEIKKMIITNINAIFLSSEQDYSTLKELLEYSDDIAENDNLDNVSKNALDKLRNNL 916 Query: 901 NSLIEEINERSETQTKDENNTANDQYSSILGNSFNKSSNDTIEHAADITDGNNTELTKTT 960 NSLIEEINERSETQTKDENNTANDQYSSILGNSFNKSSNDTIEHAADITDGNNTELTKTT Sbjct: 917 NSLIEEINERSETQTKDENNTANDQYSSILGNSFNKSSNDTIEHAADITDGNNTELTKTT 976 Query: 961 VNISAVDNTTEQSNSRKRTRSEAEQIDTSKNLENMSIQDTSTVAKNVSFVLPDEKSDAMS 1020 VNISAVDNTTEQSNSRKRTRSEAEQIDTSKNLENMSIQDTSTVAKNVSFVLPDEKSDAMS Sbjct: 977 VNISAVDNTTEQSNSRKRTRSEAEQIDTSKNLENMSIQDTSTVAKNVSFVLPDEKSDAMS 1036 Query: 1021 IDEEDKDSESFSEVC 1035 IDEEDKDSESFSEVC Sbjct: 1037 IDEEDKDSESFSEVC 1051 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.134 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,406,611 Number of Sequences: 6497 Number of extensions: 312606 Number of successful extensions: 3803 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3802 Number of HSP's gapped (non-prelim): 1 length of query: 1035 length of database: 2,996,526 effective HSP length: 100 effective length of query: 935 effective length of database: 2,346,826 effective search space: 2194282310 effective search space used: 2194282310 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR359C Annotated|04:1194875:1191927| frame 4; YDR359C/VID21; Verified; this gene contains 1 exon (982 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR359C VID21 SGDID:S0002767, Chr IV from 1191995-1194874, rever... 1877 0.0 >YDR359C VID21 SGDID:S0002767, Chr IV from 1191995-1194874, reverse complement Length = 959 Score = 1877 bits (4863), Expect = 0.0 Identities = 941/943 (99%), Positives = 942/943 (99%) Query: 1 MSSRPSSAVPNSASLSEDQSSDRSKFPKADDLIDERDRKLTELYCVSRLNQLLELTDENK 60 MSSRPSSAVPNSASLSEDQSSDRSKFPKADDLIDERDRKLTELYCVSRLNQLLELTDENK Sbjct: 1 MSSRPSSAVPNSASLSEDQSSDRSKFPKADDLIDERDRKLTELYCVSRLNQLLELTDENK 60 Query: 61 LRKEIDAFLKKNDIRRGIRFDEASLPKLLHTAATPITKKKLKDVNLINVPNQRLSDSKMS 120 LRKEIDAFLKKNDIRRGIRFDEASLPKLLHTAATPITKKKLKDVNLINVPNQRLSDSKMS Sbjct: 61 LRKEIDAFLKKNDIRRGIRFDEASLPKLLHTAATPITKKKLKDVNLINVPNQRLSDSKMS 120 Query: 121 RELPENSENVSVKSESHFVPSHDNSIRENMMDSLRPAEKTGGMWNKRPLESTMGGEEERH 180 RELPENSENVSVKSESHFVPSHDNSIRENMMDSLRPAEKTGGMWNKRPLESTMGGEEERH Sbjct: 121 RELPENSENVSVKSESHFVPSHDNSIRENMMDSLRPAEKTGGMWNKRPLESTMGGEEERH 180 Query: 181 EKRQKMQSQSLESSNNSEMASLPISPRPPVPNALAHYTYYENIEYPPADPTEVQPAVKFK 240 EKRQKMQSQSLESSNNSEMASLPISPRPPVPNALAHYTYYENIEYPPADPTEVQPAVKFK Sbjct: 181 EKRQKMQSQSLESSNNSEMASLPISPRPPVPNALAHYTYYENIEYPPADPTEVQPAVKFK 240 Query: 241 DPLIKNIMAKEIDTSDHYNENNVDALETVFLLMNDYIPSKIPQALPLAELKYMSQTLPLI 300 DPLIKNIMAKEIDTSDHYNENNVDALETVFLLMNDYIPSKIPQALPLAELKYMSQTLPLI Sbjct: 241 DPLIKNIMAKEIDTSDHYNENNVDALETVFLLMNDYIPSKIPQALPLAELKYMSQTLPLI 300 Query: 301 NLIPRAHKALTTNIINNALNEARITVVGSRIEELRRLGLWSLRQPKRFIDPWKQHNTHQN 360 NLIPRAHKALTTNIINNALNEARITVVGSRIEELRRLGLWSLRQPKRFIDPWKQHNTHQN Sbjct: 301 NLIPRAHKALTTNIINNALNEARITVVGSRIEELRRLGLWSLRQPKRFIDPWKQHNTHQN 360 Query: 361 ILLEEAKWMQADFKEGHKYKVAICTAMAQAIKDYWTYGEICCVKRKTLLPGKENKLSDDG 420 ILLEEAKWMQADFKEGHKYKVAICTAMAQAIKDYWTYGEICCVKRKTLLPGKENKLSDDG Sbjct: 361 ILLEEAKWMQADFKEGHKYKVAICTAMAQAIKDYWTYGEICCVKRKTLLPGKENKLSDDG 420 Query: 421 RISEKSGRPSDTSRNDSDISIAGKDDIGIIANVDDITEKESAAANDNDENGKNEAGAKSD 480 RISEKSGRPSDTSRNDSDISIAGKDDIGIIANVDDITEKESAAANDNDENGKNEAGAKSD Sbjct: 421 RISEKSGRPSDTSRNDSDISIAGKDDIGIIANVDDITEKESAAANDNDENGKNEAGAKSD 480 Query: 481 FDFADGLLSQEGAHDQIISSIDTKLLLKKPSSSSEVVLIQHEVAASSALIETEESKKELA 540 FDFADGLLSQEGAHDQIISSIDTKLLLKKPSSSSEVVLIQHEVAASSALIETEESKKELA Sbjct: 481 FDFADGLLSQEGAHDQIISSIDTKLLLKKPSSSSEVVLIQHEVAASSALIETEESKKELA 540 Query: 541 PPFKLSIFVDELNTFEKTLIQDLPLYNGINEERPKKDDSLPFIPISKSVVSLDDNGFYKL 600 PPFKLSIFVDELNTFEKTLIQDLPLYNGINEERPKKDDSLPFIPISKSVVSLDDNGFYKL Sbjct: 541 PPFKLSIFVDELNTFEKTLIQDLPLYNGINEERPKKDDSLPFIPISKSVVSLDDNGFYKL 600 Query: 601 LERQLIDEEPSISQLSKRRGMFYGNRRNHYLRPPAVPSLRYLQNRTPTIWLSEDDQELVK 660 LERQLIDEEPSISQLSKRRGMFYGNRRNHYLRPPAVPSLRYLQNRTPTIWLSEDDQELVK Sbjct: 601 LERQLIDEEPSISQLSKRRGMFYGNRRNHYLRPPAVPSLRYLQNRTPTIWLSEDDQELVK 660 Query: 661 NINTYGYNWELISAHMTHRLTYSYLSNIERRTPWQCFERFVQLNERFNFSDLKGPRAHSA 720 NINTYGYNWELISAHMTHRLTYSYLSNIERRTPWQCFERFVQLNERFNFSDLKGPRAHSA Sbjct: 661 NINTYGYNWELISAHMTHRLTYSYLSNIERRTPWQCFERFVQLNERFNFSDLKGPRAHSA 720 Query: 721 QQWLIEAHKFQQRQNRRISPLGVNTESIQRGHRRLRWASMFEAIRKCMKKRENTPRPNPT 780 QQWLIEAHKFQQRQNRRISPLGVNTESIQRGHRRLRWASMFEAIRKCMKKRENTPRPNPT Sbjct: 721 QQWLIEAHKFQQRQNRRISPLGVNTESIQRGHRRLRWASMFEAIRKCMKKRENTPRPNPT 780 Query: 781 QPRKPLDCKNMKVPTPAEMSLLKAQRDEALRRDIQLRRTVKNRLQQRQQQSQQAHSSRAQ 840 QPRKPLDCKNMKVPTPAEMSLLKAQRDEALRRDIQLRRTVKNRLQQRQQQSQQAHSSRAQ Sbjct: 781 QPRKPLDCKNMKVPTPAEMSLLKAQRDEALRRDIQLRRTVKNRLQQRQQQSQQAHSSRAQ 840 Query: 841 SPIPSNGKSSSNLARNGQASAPRPNQKQYTEQDIIESYSRKLLEQKPDIGPEMALKAAKN 900 SPIPSNGKSSSNLARNGQASAPRPNQKQYTEQDIIESYSRKLLEQKPDIGPEMALKAAKN Sbjct: 841 SPIPSNGKSSSNLARNGQASAPRPNQKQYTEQDIIESYSRKLLEQKPDIGPEMALKAAKN 900 Query: 901 YYRTLREQQQQLKQHQIQQQRQQLQEESSHVQQLQQLQPGSQA 943 YYRTLREQQQQLKQHQIQQQRQQLQEESSHVQQLQQLQPGS + Sbjct: 901 YYRTLREQQQQLKQHQIQQQRQQLQEESSHVQQLQQLQPGSSS 943 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.312 0.129 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,268,436 Number of Sequences: 6497 Number of extensions: 304033 Number of successful extensions: 2780 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2775 Number of HSP's gapped (non-prelim): 3 length of query: 982 length of database: 2,996,526 effective HSP length: 100 effective length of query: 882 effective length of database: 2,346,826 effective search space: 2069900532 effective search space used: 2069900532 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YDR475C Annotated|04:1410084:1407454| frame 6; YDR475C; Uncharacterized; this gene contains 1 exon (876 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YDR474C YDR474C SGDID:S0002882, Chr IV from 1407453-1409120, rev... 1090 0.0 YOR019W YOR019W SGDID:S0005545, Chr XV from 368126-370318 359 1e-99 YDR475C JIP4 SGDID:S0002883, Chr IV from 1409614-1410081, revers... 283 1e-76 >YDR474C YDR474C SGDID:S0002882, Chr IV from 1407453-1409120, reverse complement Length = 555 Score = 1090 bits (2818), Expect = 0.0 Identities = 555/555 (100%), Positives = 555/555 (100%) Query: 322 MSERKRMLMMMDDSRSVSSARRSRSRSRSRSICTRRALSLGPEESDNKLKHQNFIEWTSG 381 MSERKRMLMMMDDSRSVSSARRSRSRSRSRSICTRRALSLGPEESDNKLKHQNFIEWTSG Sbjct: 1 MSERKRMLMMMDDSRSVSSARRSRSRSRSRSICTRRALSLGPEESDNKLKHQNFIEWTSG 60 Query: 382 YTQNEIERKLQDLFDYVTLIIPQDRSVKVTVEILIGKTKKTLLEAINIYLPDFFVSSTLR 441 YTQNEIERKLQDLFDYVTLIIPQDRSVKVTVEILIGKTKKTLLEAINIYLPDFFVSSTLR Sbjct: 61 YTQNEIERKLQDLFDYVTLIIPQDRSVKVTVEILIGKTKKTLLEAINIYLPDFFVSSTLR 120 Query: 442 WERTDSLVRWKSNFLTDKLCTNFPIPTFIVPAKRMFDLEIDLQKEFKEPEVTKQKNTSGP 501 WERTDSLVRWKSNFLTDKLCTNFPIPTFIVPAKRMFDLEIDLQKEFKEPEVTKQKNTSGP Sbjct: 121 WERTDSLVRWKSNFLTDKLCTNFPIPTFIVPAKRMFDLEIDLQKEFKEPEVTKQKNTSGP 180 Query: 502 KPGFSHSKSADASIPTISNIKRKQDNDYSIDSLCYAPEANGANNSSREEASDDELNAFKD 561 KPGFSHSKSADASIPTISNIKRKQDNDYSIDSLCYAPEANGANNSSREEASDDELNAFKD Sbjct: 181 KPGFSHSKSADASIPTISNIKRKQDNDYSIDSLCYAPEANGANNSSREEASDDELNAFKD 240 Query: 562 DENDVMSVKSLTSNISVKEKLCTMARKRRKSMAQQLNDADHDSSIPPGQRHLKKLNIILE 621 DENDVMSVKSLTSNISVKEKLCTMARKRRKSMAQQLNDADHDSSIPPGQRHLKKLNIILE Sbjct: 241 DENDVMSVKSLTSNISVKEKLCTMARKRRKSMAQQLNDADHDSSIPPGQRHLKKLNIILE 300 Query: 622 SSLKFSLEIDSITDSIENGDVDEKRAHSMESGFEELKRVITGGAPPRHVATPQRSMLDVL 681 SSLKFSLEIDSITDSIENGDVDEKRAHSMESGFEELKRVITGGAPPRHVATPQRSMLDVL Sbjct: 301 SSLKFSLEIDSITDSIENGDVDEKRAHSMESGFEELKRVITGGAPPRHVATPQRSMLDVL 360 Query: 682 DNPSSSRSKSKSRSSSKSRIRDKSKPSSPTATDINSSASASRSRSPQIKFASSVKNVDGN 741 DNPSSSRSKSKSRSSSKSRIRDKSKPSSPTATDINSSASASRSRSPQIKFASSVKNVDGN Sbjct: 361 DNPSSSRSKSKSRSSSKSRIRDKSKPSSPTATDINSSASASRSRSPQIKFASSVKNVDGN 420 Query: 742 AALGAIKSRHSLDSPGDQQQQHHHHHHRDTDQLSVPGLPHLAPSKSYSVSSGNKDSSLRK 801 AALGAIKSRHSLDSPGDQQQQHHHHHHRDTDQLSVPGLPHLAPSKSYSVSSGNKDSSLRK Sbjct: 421 AALGAIKSRHSLDSPGDQQQQHHHHHHRDTDQLSVPGLPHLAPSKSYSVSSGNKDSSLRK 480 Query: 802 VSSSSSLRKVKSNDSNSGKRIKKPVVTSAHLKPSSGGGGLFSFFKSKSRSPSSFRKEDES 861 VSSSSSLRKVKSNDSNSGKRIKKPVVTSAHLKPSSGGGGLFSFFKSKSRSPSSFRKEDES Sbjct: 481 VSSSSSLRKVKSNDSNSGKRIKKPVVTSAHLKPSSGGGGLFSFFKSKSRSPSSFRKEDES 540 Query: 862 KNTPKRGGLFGFGRL 876 KNTPKRGGLFGFGRL Sbjct: 541 KNTPKRGGLFGFGRL 555 >YOR019W YOR019W SGDID:S0005545, Chr XV from 368126-370318 Length = 730 Score = 359 bits (921), Expect = 1e-99 Identities = 276/878 (31%), Positives = 412/878 (46%), Gaps = 195/878 (22%) Query: 29 TVDILAKQDEDKSNNDDRRSLASILDSSSSVKKKGKGSNEKYLPCVSFNTVPRSRVSSPL 88 T D+ +Q E+++ + ++ KKKG + P V+F+TVP + S + Sbjct: 18 TFDVPGQQFEERNEQNLKKR----------AKKKGS-----FQPSVAFDTVPSTAGYSSI 62 Query: 89 DEEKREFPGVQISADYTMEEYYDDESGFTSDNNADYFSGNSYSS---------RREGSAS 139 D+ + F GV + YTMEE YDDE+ S N Y SS + E S+ Sbjct: 63 DDSREGFKGVPVPNYYTMEECYDDETDSFSPNLQYYLRDTFQSSPFLNTRKENKSESSSF 122 Query: 140 PGRYSSPPPASKRNIKIGKMFKISENGKIVREDYPTTPTDINDALVISRAYANWRQLWIK 199 P R S ++N I K F +S+NGKIVR DYP+TP +N+ L+I+R NW +LW + Sbjct: 123 PMRSSK---LLEKNSDIKKYFLVSKNGKIVRRDYPSTPVIVNETLMINRFEKNWIKLWRQ 179 Query: 200 KKNQIDHRLEQKRDFFNYPTILFPPNKKKSSEGATPTIKFNPPIEDGFTPLTKSQKRKER 259 +K QI+ RL K+ +F YP ++F S E P + D P TK QKRK + Sbjct: 180 RKLQINERLNDKKKWFTYPELIF------SEERIKPLYR-----GDDSAPCTKEQKRKHK 228 Query: 260 VLSEKVGFPNTPRTILCHISGRKHTWVALDWALRTLIQNTDHIVVLANLPRLTKNNFEDN 319 +L +KVG+PN P+TI+CHI+G+KHTWVALDW + +N DHIVV+ LP++ N Sbjct: 229 ILQQKVGYPNNPKTIVCHINGKKHTWVALDWTVYKFARNLDHIVVITTLPKMISN----- 283 Query: 320 DSMSERKRMLMMMDDSRSVSSARRSRSRSRSRSICTRRALSLGPEESDNKLKHQNFIEWT 379 R DD+ EW Sbjct: 284 -------RKKTAKDDT-----------------------------------------EWA 295 Query: 380 SGYTQNEIERKLQDLFDYVTLIIPQDR-SVKVTVEILIGKTKKTLLEAINIYLPDFFVSS 438 GY + I++KL D+FDY+ ++ + SVK+T+EI++GK KK+L++ IN++ PDF V + Sbjct: 296 PGYQKEVIDQKLNDIFDYILQLVKVVKISVKITLEIIVGKIKKSLVDVINVHTPDFLVLA 355 Query: 439 TLRWERTDSLVRWKSNFLTDKLCTNFPIPTFIVPAKRMFDLEIDLQKEFKEPEVTKQKNT 498 TL+ ER ++L+ +KS LTD ++PIPTF+VP+KRM+ E++LQ+E E V+K Sbjct: 356 TLKHERNENLITYKSKKLTDVFPVSYPIPTFVVPSKRMYSFELNLQREVNEHYVSK---- 411 Query: 499 SGPKPGFSHSKSADASIPTISNIKRKQDNDYSIDSLCYAPEANGANNSSREEASDDELNA 558 +H K + ++S+ K++ I S + + A + R+ + N Sbjct: 412 -------NHMKHEHTDVESMSSSMFKKNTISDISS--HISVDSYAEDFKRQGYIKKQFN- 461 Query: 559 FKDDENDVMSVKSLTSNISVKEKLCTMARKRRKSMA---QQLNDADHDSSIPPGQRHLKK 615 TSN S+ KL +A+ R+ + ++L D + D + LKK Sbjct: 462 --------------TSNDSIPRKLTGLAQHSRRKITGDIEKLQDDEKDRECTKEKLLLKK 507 Query: 616 LNIILESSLKFSLEIDSITDSIENGDVDEKRAHSMESGFEELKRVITGGAPPRHVATPQR 675 ++II+ SLK SL I+++ +V + S F K + G Sbjct: 508 IDIIIRESLKSSLAIETLPGK----NVSQSSHGDQISSF---KNALIGNG---------- 550 Query: 676 SMLDVLDNPSSSRSKSKSRSSSKSRIRDKSKPSSPTATDINSSASASRSRSPQIKFASSV 735 SK+ KS I S T T I S+S + QIKFA+SV Sbjct: 551 ---------------SKNTKFRKSLIPYSSSEEQNTTTTIKLSSSP----TSQIKFATSV 591 Query: 736 KNVDGNAALGAIKSRHSLDSPGDQQQQHHHHHHRDTDQLSVPGLPHLAPSKSYSVSSGNK 795 K+ DG AALG K+R+ D H D + P S SS + Sbjct: 592 KHKDGRAALG--KARNLPDI--------RHSISFDKENSFDP---------SDKSSSVDN 632 Query: 796 DSSLRKVSSSSSLRKVKSNDSNSGKRIKKPVVTSAHLKPSSGGG-GLFSFFKSKSRS--- 851 LRKV S+ +LRKVK+NDS+S KK + + + +GGG G+F FKS S S Sbjct: 633 SIPLRKVKSAGALRKVKTNDSSSSAGSKKSSSSFSTVNTFTGGGVGIFKVFKSGSSSGNK 692 Query: 852 -------------PSSFRKEDESKNTPKRGGLFGFGRL 876 S R + + K K+ LF FG++ Sbjct: 693 SSSRRNSSSGDVFESDDRNDKKKKKKKKKKSLFLFGKI 730 >YDR475C JIP4 SGDID:S0002883, Chr IV from 1409614-1410081, reverse complement Length = 155 Score = 283 bits (723), Expect = 1e-76 Identities = 141/141 (100%), Positives = 141/141 (100%) Query: 1 MVVRDQDEALRNSYKYVKLYVRQDQLEDTVDILAKQDEDKSNNDDRRSLASILDSSSSVK 60 MVVRDQDEALRNSYKYVKLYVRQDQLEDTVDILAKQDEDKSNNDDRRSLASILDSSSSVK Sbjct: 1 MVVRDQDEALRNSYKYVKLYVRQDQLEDTVDILAKQDEDKSNNDDRRSLASILDSSSSVK 60 Query: 61 KKGKGSNEKYLPCVSFNTVPRSRVSSPLDEEKREFPGVQISADYTMEEYYDDESGFTSDN 120 KKGKGSNEKYLPCVSFNTVPRSRVSSPLDEEKREFPGVQISADYTMEEYYDDESGFTSDN Sbjct: 61 KKGKGSNEKYLPCVSFNTVPRSRVSSPLDEEKREFPGVQISADYTMEEYYDDESGFTSDN 120 Query: 121 NADYFSGNSYSSRREGSASPG 141 NADYFSGNSYSSRREGSASPG Sbjct: 121 NADYFSGNSYSSRREGSASPG 141 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.311 0.128 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,826,462 Number of Sequences: 6497 Number of extensions: 286971 Number of successful extensions: 1890 Number of sequences better than 1.0e-30: 3 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 1862 Number of HSP's gapped (non-prelim): 8 length of query: 876 length of database: 2,996,526 effective HSP length: 99 effective length of query: 777 effective length of database: 2,353,323 effective search space: 1828531971 effective search space used: 1828531971 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YEL077W-A Annotated|05:630:1112| frame 3; YEL077W-A; Dubious; this gene contains 1 exon (160 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YPR204C-A 320 6e-89 YPL283W-B 320 6e-89 YGR296C-B 320 6e-89 YER190C-B 320 6e-89 YEL077W-A 320 6e-89 YBL113W-A 320 8e-89 YOR396C-A 318 3e-88 YLR467C-A 318 3e-88 YLR466C-A 318 3e-88 YHL050W-A 316 1e-87 YDR545C-A 316 1e-87 YNL339W-B 315 2e-87 YML133W-B 315 2e-87 YHR219C-A 315 2e-87 YJL225W-A 314 5e-87 YIL177W-A 314 5e-87 YLL066W-A 313 8e-87 YLL067W-A 313 8e-87 YFL068W YFL068W SGDID:S0001826, Chr VI from 53-535 313 8e-87 >YPR204C-A Length = 160 Score = 320 bits (820), Expect = 6e-89 Identities = 159/160 (99%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YPL283W-B Length = 160 Score = 320 bits (820), Expect = 6e-89 Identities = 159/160 (99%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YGR296C-B Length = 160 Score = 320 bits (820), Expect = 6e-89 Identities = 159/160 (99%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YER190C-B Length = 160 Score = 320 bits (820), Expect = 6e-89 Identities = 159/160 (99%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YEL077W-A Length = 160 Score = 320 bits (820), Expect = 6e-89 Identities = 159/160 (99%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YBL113W-A Length = 160 Score = 320 bits (819), Expect = 8e-89 Identities = 158/160 (98%), Positives = 159/160 (99%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFL+ISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLIISQHSLHS 160 >YOR396C-A Length = 160 Score = 318 bits (814), Expect = 3e-88 Identities = 158/160 (98%), Positives = 158/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YLR467C-A Length = 160 Score = 318 bits (814), Expect = 3e-88 Identities = 158/160 (98%), Positives = 158/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YLR466C-A Length = 160 Score = 318 bits (814), Expect = 3e-88 Identities = 158/160 (98%), Positives = 158/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YHL050W-A Length = 160 Score = 316 bits (809), Expect = 1e-87 Identities = 157/160 (98%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YDR545C-A Length = 159 Score = 316 bits (809), Expect = 1e-87 Identities = 157/159 (98%), Positives = 157/159 (98%) Query: 2 MPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQHL 61 MPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQHL Sbjct: 1 MPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQHL 60 Query: 62 CLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRVD 121 CLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRVD Sbjct: 61 CLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRVD 120 Query: 122 LSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 LSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 LSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 159 >YNL339W-B Length = 160 Score = 315 bits (808), Expect = 2e-87 Identities = 157/160 (98%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YML133W-B Length = 160 Score = 315 bits (808), Expect = 2e-87 Identities = 157/160 (98%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YHR219C-A Length = 160 Score = 315 bits (808), Expect = 2e-87 Identities = 157/160 (98%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YJL225W-A Length = 160 Score = 314 bits (804), Expect = 5e-87 Identities = 156/160 (97%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNS FLERFH +RIVFCLPFFLALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSTFLERFHNNRIVFCLPFFLALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYF IQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFKIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YIL177W-A Length = 160 Score = 314 bits (804), Expect = 5e-87 Identities = 156/160 (97%), Positives = 157/160 (98%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNS FLERFH +RIVFCLPFFLALFFVPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSTFLERFHNNRIVFCLPFFLALFFVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYF IQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFKIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YLL066W-A Length = 160 Score = 313 bits (802), Expect = 8e-87 Identities = 156/160 (97%), Positives = 156/160 (97%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YLL067W-A Length = 160 Score = 313 bits (802), Expect = 8e-87 Identities = 156/160 (97%), Positives = 156/160 (97%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 >YFL068W YFL068W SGDID:S0001826, Chr VI from 53-535 Length = 160 Score = 313 bits (802), Expect = 8e-87 Identities = 156/160 (97%), Positives = 156/160 (97%) Query: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFLALFFVPVQKVLQH 60 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFF ALF VPVQKVLQH Sbjct: 1 MMPAKLQLDVLRTLQSSARHGTQTLKNSNFLERFHKDRIVFCLPFFPALFLVPVQKVLQH 60 Query: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV Sbjct: 61 LCLRFTQVAPYFIIQLFDLPSRHAENLAPLLASCRIQYTNCFSSSSNGQVPSIISLYLRV 120 Query: 121 DLSPFYAKIFQISYRVPMIWLDVFQVFFVFLVISQHSLHS 160 DLSPFYAK FQI YRVPMIWLDVFQVFFVFLVISQHSLHS Sbjct: 121 DLSPFYAKKFQIPYRVPMIWLDVFQVFFVFLVISQHSLHS 160 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.333 0.143 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 900,447 Number of Sequences: 6497 Number of extensions: 34386 Number of successful extensions: 138 Number of sequences better than 1.0e-30: 19 Number of HSP's better than 0.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119 Number of HSP's gapped (non-prelim): 19 length of query: 160 length of database: 2,996,526 effective HSP length: 83 effective length of query: 77 effective length of database: 2,457,275 effective search space: 189210175 effective search space used: 189210175 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 319 (127.5 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YFR040W Annotated|06:234229:237237| frame 1; YFR040W/SAP155; Verified; this gene contains 1 exon (1002 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YFR040W SAP155 SGDID:S0001936, Chr VI from 234521-237238 1807 0.0 YGL229C SAP4 SGDID:S0003198, Chr VII from 64502-66958, reverse c... 608 e-174 YJL098W SAP185 SGDID:S0003634, Chr X from 241779-244955 390 e-109 YKR028W SAP190 SGDID:S0001736, Chr XI from 493895-497191 378 e-105 >YFR040W SAP155 SGDID:S0001936, Chr VI from 234521-237238 Length = 905 Score = 1807 bits (4681), Expect = 0.0 Identities = 905/905 (100%), Positives = 905/905 (100%) Query: 98 MNSSESSTTSFSSGSTSKTDLDEEDISNATAPMMVTTKNLDNSFIERMLVETELLNELSR 157 MNSSESSTTSFSSGSTSKTDLDEEDISNATAPMMVTTKNLDNSFIERMLVETELLNELSR Sbjct: 1 MNSSESSTTSFSSGSTSKTDLDEEDISNATAPMMVTTKNLDNSFIERMLVETELLNELSR 60 Query: 158 QNKTLLDFICFGFFFDKKTNKKVNNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQQQL 217 QNKTLLDFICFGFFFDKKTNKKVNNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQQQL Sbjct: 61 QNKTLLDFICFGFFFDKKTNKKVNNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQQQL 120 Query: 218 DDSSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGNDDINNNDDDDDANEDDESA 277 DDSSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGNDDINNNDDDDDANEDDESA Sbjct: 121 DDSSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGNDDINNNDDDDDANEDDESA 180 Query: 278 YLTKATIISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKINQNL 337 YLTKATIISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKINQNL Sbjct: 181 YLTKATIISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKINQNL 240 Query: 338 LLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDKIESPTGIIELVYDQNLI 397 LLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDKIESPTGIIELVYDQNLI Sbjct: 241 LLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDKIESPTGIIELVYDQNLI 300 Query: 398 SKCLSFLNNKESPADIQACVGDFLKALIAISANAPLDDISIGPNSLTRQLASPESIAKLV 457 SKCLSFLNNKESPADIQACVGDFLKALIAISANAPLDDISIGPNSLTRQLASPESIAKLV Sbjct: 301 SKCLSFLNNKESPADIQACVGDFLKALIAISANAPLDDISIGPNSLTRQLASPESIAKLV 360 Query: 458 DIMINQRGAALNTTVSIVIELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYLGYLLRKFS 517 DIMINQRGAALNTTVSIVIELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYLGYLLRKFS Sbjct: 361 DIMINQRGAALNTTVSIVIELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYLGYLLRKFS 420 Query: 518 NHLSDFFQIILDIENDANIPLHENQLHEKFKPLGFERFKVVELIAELLHCSNMGLMNSKR 577 NHLSDFFQIILDIENDANIPLHENQLHEKFKPLGFERFKVVELIAELLHCSNMGLMNSKR Sbjct: 421 NHLSDFFQIILDIENDANIPLHENQLHEKFKPLGFERFKVVELIAELLHCSNMGLMNSKR 480 Query: 578 AERIARRRDKVRSQLSHHLQDALNDLSIEEKEQLKTKHSPTRDTDHDLKNNNGKIDNDNN 637 AERIARRRDKVRSQLSHHLQDALNDLSIEEKEQLKTKHSPTRDTDHDLKNNNGKIDNDNN Sbjct: 481 AERIARRRDKVRSQLSHHLQDALNDLSIEEKEQLKTKHSPTRDTDHDLKNNNGKIDNDNN 540 Query: 638 DNDDESDYGDEIDESFEIPYINMKQTIKLRTDPTVGDLFKIKLYDTRIVSKIMELFLTHP 697 DNDDESDYGDEIDESFEIPYINMKQTIKLRTDPTVGDLFKIKLYDTRIVSKIMELFLTHP Sbjct: 541 DNDDESDYGDEIDESFEIPYINMKQTIKLRTDPTVGDLFKIKLYDTRIVSKIMELFLTHP 600 Query: 698 WNNFWHNVIFDIIQQIFNGRMDFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSRFS 757 WNNFWHNVIFDIIQQIFNGRMDFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSRFS Sbjct: 601 WNNFWHNVIFDIIQQIFNGRMDFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSRFS 660 Query: 758 PVIRDPNFDFKITTDFILRGYQDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKLYKVELI 817 PVIRDPNFDFKITTDFILRGYQDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKLYKVELI Sbjct: 661 PVIRDPNFDFKITTDFILRGYQDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKLYKVELI 720 Query: 818 SPDIQVILQTEEWQYYSEEVLNETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTVLTPNG 877 SPDIQVILQTEEWQYYSEEVLNETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTVLTPNG Sbjct: 721 SPDIQVILQTEEWQYYSEEVLNETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTVLTPNG 780 Query: 878 DASNNNEILDSDTGSSNGTSGGGQLINVESLEEQLSLSTESDLHNKLREMLINRAQEDVD 937 DASNNNEILDSDTGSSNGTSGGGQLINVESLEEQLSLSTESDLHNKLREMLINRAQEDVD Sbjct: 781 DASNNNEILDSDTGSSNGTSGGGQLINVESLEEQLSLSTESDLHNKLREMLINRAQEDVD 840 Query: 938 NKNTENGVFILGPPEDKNSNSNINNTNHNSNNSNNNDNNDNNDNDNDNTRNYNEDADNDN 997 NKNTENGVFILGPPEDKNSNSNINNTNHNSNNSNNNDNNDNNDNDNDNTRNYNEDADNDN Sbjct: 841 NKNTENGVFILGPPEDKNSNSNINNTNHNSNNSNNNDNNDNNDNDNDNTRNYNEDADNDN 900 Query: 998 DYDHE 1002 DYDHE Sbjct: 901 DYDHE 905 >YGL229C SAP4 SGDID:S0003198, Chr VII from 64502-66958, reverse complement Length = 818 Score = 608 bits (1567), Expect = e-174 Identities = 355/873 (40%), Positives = 508/873 (58%), Gaps = 125/873 (14%) Query: 96 RSMNSSESSTTSFSSGSTSKTDLDEEDISNATAPMMVTTKNLDNSFIERMLVETELLNEL 155 RS+ +E+S+T S E + +L+ SFI+R+L+ET LL+EL Sbjct: 27 RSLEGNETSSTDDKKNEPSMESESEFGTESRDR------SDLNQSFIDRILLETALLDEL 80 Query: 156 S-RQNKTLLDFICFGFFFDKKTNKKVNNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQ 214 + N L+DFIC G+F+D ++ ++V +M+YLVD LM + I Sbjct: 81 NGAANDRLVDFICLGYFYDDRS-QQVRHMDYLVDMLMAYLKDIDRT-------------- 125 Query: 215 QQLDDSSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGNDDINNNDDDDDANEDD 274 + +E+ Q E ED +DD Sbjct: 126 -----GYRTPFLLENSFHQTGEYED--------------------------------QDD 148 Query: 275 ESAYLTKATIISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKIN 334 E L IIS IF I E+LV+N +L+ ++ + N +EN P++ +FLKIN Sbjct: 149 EDPMLY-VNIISSIFCSKSAPIVEALVQNTPFLSSLFEVFQFENIEAENCPILAVFLKIN 207 Query: 335 QNLLLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDKIESPTGIIELVYDQ 394 + LL + YL F +++ + VD L H+++S L++F +KI+ TD++ESPT II+ +Y Q Sbjct: 208 ETLLFEQTSSYLEFFKSQPNIVDKFLYHIEVSPLVEFLIKIMLTDQVESPTNIIDFLYHQ 267 Query: 395 NLISKCLSFLNNKESPADIQACVGDFLKALIAISANAPLDDISIGPNSLTRQLASPESIA 454 +LI KCL+ L N + IQ G+ LKALI+IS N LD + IGPN LTRQLASP+ + Sbjct: 268 DLIPKCLNLLENSKYSPGIQNSSGELLKALISISTNFKLDTLWIGPNRLTRQLASPQYVD 327 Query: 455 KLVDIMINQRGAALNTTVSIVIELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYLGYLLR 514 +L++I++ QRG A+ VSI+IELIRKNNSDYD+V+LL+TTI +PPS RDP+YLG+LL Sbjct: 328 QLINIILFQRGHAMGVAVSIIIELIRKNNSDYDEVDLLSTTIVDNPPSQRDPVYLGHLLY 387 Query: 515 KFSNHLSDFFQIILDIENDAN---------IP-----LHENQLHEKFKPLGFERFKVVEL 560 + + H+ DF+ +++ +END + +P L ENQLHE F+PLGFER K+ EL Sbjct: 388 ELTMHMEDFYALLIKLENDDDDDHDTASKALPSVKHHLLENQLHESFRPLGFERVKITEL 447 Query: 561 IAELLHCSNMGLMNSKRAERIARRRDKVRSQLSHH-LQDALNDLSIEEKEQLKTKHSPTR 619 I+E+LHCSNMGLMNSKR E+IAR RDK R L + L+ A+ +L+I + ++ T Sbjct: 448 ISEMLHCSNMGLMNSKRGEKIARTRDKCRDTLDQNSLEKAMKNLNIND-------NTITS 500 Query: 620 DTDHDLKNNNGKIDNDNNDND-------------------DESD--YGDEIDESFEIPYI 658 +T D NNN ND+NDN D SD D+ D SFEIPY+ Sbjct: 501 NTLEDKCNNND--SNDSNDNQKQKKNIKKKFHDNELYSTFDTSDDNIDDDDDMSFEIPYV 558 Query: 659 NMKQTIKLRTDPTVGDLFKIKLYDTRIVSKIMELFLTHPWNNFWHNVIFDIIQQIFNGRM 718 + Q +K+R +PT+GDLFKIKL+D K ++LFL +PWNNFWHN++FDIIQQIFNGRM Sbjct: 559 SETQNLKIRKNPTIGDLFKIKLHDLGFFPKFLQLFLRYPWNNFWHNIVFDIIQQIFNGRM 618 Query: 719 DFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSRFSPVIRDPNFDFKITTDFILRGY 778 DFSYNSFLV SLF+ K S +F+ + + V DF I +DFIL+G+ Sbjct: 619 DFSYNSFLVYSLFDFKKSTRFIPKPLYGSNQKLPVK-----------DFHIISDFILQGH 667 Query: 779 QDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKLYKVELISPDIQVILQTEEWQYYSEEVL 838 +DS++FYE K NLGYMG +VLIAEE+ K+SK+YK +LI+PDI LQ E W YS ++L Sbjct: 668 KDSFEFYEKEKTNLGYMGQLVLIAEEIAKYSKIYKTDLIAPDIYAFLQDEVWMSYSSDIL 727 Query: 839 NETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTVLTP-NGDASNNNEILDSDTGSSNGTS 897 NETR M S ILGGG + + + N + + P + + NEI+ + + Sbjct: 728 NETRTMCSIILGGGQFCAESDENTNQDFLEKADMSKPAHPSTMDENEIVHEEDVKLHD-- 785 Query: 898 GGGQLINVESLEEQLSLSTESDLHNKLREMLIN 930 V L ++L TE D+H+K+++++++ Sbjct: 786 ------KVAELIDELGQLTELDIHDKIKDVIVD 812 >YJL098W SAP185 SGDID:S0003634, Chr X from 241779-244955 Length = 1058 Score = 390 bits (1003), Expect = e-109 Identities = 293/949 (30%), Positives = 453/949 (47%), Gaps = 162/949 (17%) Query: 101 SESSTTSFSSGSTSKTDLDEE-DISNATAPMMVTTKNLDNSFIERMLVETELLNELSRQN 159 S S+ S S S D +EE ++ N NL S + +L + EL EL N Sbjct: 43 SNSTDESLESNSFKSEDEEEEYELPNREEDYKAYKPNL--SLLNDLLDDEELYTELMCSN 100 Query: 160 KTLLDFICFGFFFDKKTNKKVNNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQQQLDD 219 LL ++ + + L + I ++ +T ++ N E + L Sbjct: 101 FKLLVYLKYP------------------EVLSKLIDYVRNSTILESNIDRVTSEDRDLVR 142 Query: 220 SSQEDVYVESDTEQEEEKEDDNNSNNKKRRKRGSSSFGNDDINNNDDDDDANED------ 273 +D + + + ++K D K+R + G ++ N+++D A+ED Sbjct: 143 GEDKDTTEDFENAKADKKNIDGTFEEKERTRSGE-----EEELENEENDSASEDTRVTLP 197 Query: 274 ---DESAYLTKATIISEIFSLDIWLISESLVKNQSYLNKIWSIINQPNFNSENSPLVPIF 330 +E +A I +EI S D+W IS +L++N+ L K+WSI+ P+ S + F Sbjct: 198 HELEEHDDTRRARIAAEILSADVWPISSALIENEGLLAKLWSILRLPSPLSIEASTY--F 255 Query: 331 LKINQNLLLTRQDQYLNFIRTERSFVDDMLKHVDISLLMDFFLKIISTDKIESPTGIIEL 390 +KIN+ LL D + FI + VDD L H+D LMDF LK+ISTDK E G+I+L Sbjct: 256 MKINERLLDMNMDGIIEFILKKEHIVDDFLAHIDNPPLMDFLLKVISTDKPEISNGVIQL 315 Query: 391 VYDQNLISKCLSFLNNKESPADIQACVGDFLKALIAISANAPLD-DISIGPNSLTRQLAS 449 QNL+ K + L+ Q+ GDFLKAL+ IS N P + SIGPN LTRQL S Sbjct: 316 FKKQNLVPKLIHLLDPVFDSCT-QSAAGDFLKALVTISGNCPNEITSSIGPNELTRQLVS 374 Query: 450 PESIAKLVDIMINQRGAALNTTVSIVIELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYL 509 P + +L+DIM+ + G +LN V I+IELIRKNNSDYD + TTI++HPP++RDPIYL Sbjct: 375 PNMMKQLMDIML-KGGNSLNNGVGIIIELIRKNNSDYDTIQTNYTTIESHPPTDRDPIYL 433 Query: 510 GYLLRKFSNHLSDFFQIILDIENDANIPLHENQLHEKFKPLGFERFKVVELIAELLHCSN 569 GYL++ FS H++DF +I+ + IPL + + +PLGFERFK+ ELIAELLHCSN Sbjct: 434 GYLVKMFSEHMADFNKIL----TEKKIPLLQTS-YGTIEPLGFERFKICELIAELLHCSN 488 Query: 570 MGLMNSKRAERIARRRDKVRSQL--SHHLQDALNDLSIEEKEQLKT--KHSPTRDTDHDL 625 M L+N A I R RD R ++ S + D+ + ++E E T D + + Sbjct: 489 MTLLNEPSAYDIVRERDAERERIFNSQNYVDSNDRSELKENEDDNTGDADDEVEDDTNQV 548 Query: 626 KNNNGKID------------------NDNNDNDDE---------SDYGDEIDES-FEIPY 657 ++ N ID N N +N+++ D+ DE DE+ FE Y Sbjct: 549 ESANTSIDGEEVIDKLNSLQIETNKVNQNMNNEEQHSLMPDFNNGDFKDEEDENPFEPQY 608 Query: 658 INM---KQTIK--LRTDPTVGDLFKIKLYDTRIVSKIMELFLTHPWNNFWHNVIFDIIQQ 712 ++ I+ R P VGD KI L DTR++ ++E+F WNNF HNV++D++QQ Sbjct: 609 SDVILDSSDIEKNFRVSPNVGDQLKISLQDTRVIDTMLEMFFHFQWNNFLHNVVYDVVQQ 668 Query: 713 IFNGRMDFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSRFSPVIRDPNFDFKITTD 772 IFNG + YN FL + D++I+ IR TD Sbjct: 669 IFNGPLKIGYNRFL-------------LDDLLIN-------------IR--------LTD 694 Query: 773 FILRGYQDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKLYK---VELISPDIQVILQTEE 829 I+ G + ++ + LGYMGH+ LIAEEV KF+ + + + ++ L + Sbjct: 695 MIINGNNECIEYEKGHDTRLGYMGHLTLIAEEVTKFTAYIEEMNITFENTEVMSSLFESK 754 Query: 830 WQYYSEEVLNETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTVLTPNGDASNNNEILDSD 889 W Y+E+VL + + Y+ IL GD + ++L + Sbjct: 755 WIAYTEDVLEDLKEKYNAIL---------------------------GDIAEEGDMLQDE 787 Query: 890 TGSSNGTSGGGQLINVESLEEQLSLSTESDLHNKLREMLINRAQEDVDNKNTENGVFILG 949 + G + ++ T D N + +M R QE+ +++ F Sbjct: 788 EEDAVYDKG------------ERTMGTVDDYINDIMQMDNVRCQEEEEDEGEGYVSFDED 835 Query: 950 PPEDKNSNSNINNTNHNSNNSNNNDNN---DNNDNDNDNTR-NYNEDAD 994 P++ + ++ + NS+ + + + D TR N+N D+D Sbjct: 836 EPQEYRNGDSVRSKESNSSEGKRDQEQLYYEYVNEDGTKTRLNFNPDSD 884 >YKR028W SAP190 SGDID:S0001736, Chr XI from 493895-497191 Length = 1098 Score = 378 bits (970), Expect = e-105 Identities = 310/1017 (30%), Positives = 483/1017 (47%), Gaps = 163/1017 (16%) Query: 2 SFWPFGQNLN-HSNINKILDEYFHVLHELERINPSVGKAIPAIFNNVQERGTSDSLDSIP 60 SFW FGQ+ + S ++KIL+ F +IN +P E +D D+ Sbjct: 4 SFWKFGQDYSIESPVSKILNSAFI------KINKDQDDDVPT---GTCEENIADDEDNSS 54 Query: 61 EEYSHGDEVKTARGDQKSRFEKDDQQERYEKEEEERSMNSSESSTTSFSSGSTSKTDLDE 120 +Y+ + D+ E++EEE ++ ++ES ++ Sbjct: 55 HDYAASE---------------DNVVNENEEKEEENTLPTTESEYENYRP---------- 89 Query: 121 EDISNATAPMMVTTKNLDNSFIERMLVETELLNELSRQNKTLLDFICFGFFFDKKTNKKV 180 NLD ++ +L + EL EL N LL F+ + K Sbjct: 90 ---------------NLD--VLDDLLDDDELYTELMCSNFKLLIFLKYPDVLSKLIEYVT 132 Query: 181 NNMEYLVDQLMECISKIKTATTVDLNNLIDYQEQQQLDDSSQEDVYVESDTEQEEEKEDD 240 N E ++D+ + K + ++ + + +E D ++++KED Sbjct: 133 N--EKILDEETDSAKK-----------------PEIIEGVNDHPILIERD--RKDKKEDA 171 Query: 241 NNSNNKKRRKRGSSSFGNDDINNNDDDDDAN---EDDESAYLTKATIISEIFSLDIWLIS 297 + + S D+ + + ++ E +E +A I +EI S D+W IS Sbjct: 172 EEGGDSEETTNDSDHDSGDERSVDSEETSITLPPESEEQVETRRARIAAEILSADVWPIS 231 Query: 298 ESLVKNQSYLNKIWSIINQPNFNSENSPLVPIFLKINQNLLLTRQDQYLNFIRTERSFVD 357 ++++N+ L ++WSI++ P P F+KIN+ LL L FI + S V Sbjct: 232 AAIMQNKDLLGRLWSILDHPA--PLPIPASTYFMKINERLLDMDITGMLEFILSRDSLVA 289 Query: 358 DMLKHVDISLLMDFFLKIISTDKIESPTGIIELVYDQNLISKCLSFLNNKESPADIQACV 417 L HVD LMDF LK+ISTDK +SPTG+I+++ Q LI K L LN E Q+ Sbjct: 290 RFLTHVDNPSLMDFLLKVISTDKPDSPTGVIKILKSQELIPKLLDHLN-PEYGISTQSAA 348 Query: 418 GDFLKALIAISANAPLDDIS-IGPNSLTRQLASPESIAKLVDIMINQRGAALNTTVSIVI 476 GDF+KA + +S N+ + S IGPN LTRQL S E I KL+ IM+ + G +L+ V I+I Sbjct: 349 GDFIKAFVTLSTNSSNELASGIGPNELTRQLVSEEMIEKLIKIML-KGGTSLSNGVGIII 407 Query: 477 ELIRKNNSDYDQVNLLTTTIKTHPPSNRDPIYLGYLLRKFSNHLSDFFQIILDIENDANI 536 ELIRKNNSDYD + L+ TT+++HPP++RDPI+L +L++ F+ H+ DF D+ + + Sbjct: 408 ELIRKNNSDYDFIQLVYTTLESHPPTDRDPIHLIHLVKLFAKHMPDF----ADMLDKTKL 463 Query: 537 PLHENQLHEKFKPLGFERFKVVELIAELLHCSNMGLMNSKRAERIARRRDKVRSQLSHHL 596 PL E +PLGFERFK+ ELIAELLHCSNM L+N E IA+ RD R++ Sbjct: 464 PLMEMPFGN-IEPLGFERFKICELIAELLHCSNMTLLNEPNGEMIAQERDIERAKELETS 522 Query: 597 QDALNDLSI-EEKEQLKTKHSPTRDTDHDLK----NNNGKIDNDNNDN-------DDESD 644 + N +I + K K +D +L NN G +++ ND D +SD Sbjct: 523 TEKENITAIVDNKSSYYDKDCVEKDITENLGALQINNQGSEEDELNDTGVSSVKLDVKSD 582 Query: 645 Y----GDEIDESFEIPY---INMKQTIK--LRTDPTVGDLFKIKLYDTRIVSKIMELFLT 695 G E D S Y ++ ++++ LR P VGD KI L DT+I+ I+++F Sbjct: 583 AKVVEGLENDASGVELYDETLSDTESVRECLREKPLVGDRLKIALEDTKILISILDMFTE 642 Query: 696 HPWNNFWHNVIFDIIQQIFNGRMDFSYNSFLVLSLFNLKSSYQFMTDIVISDEKGTDVSR 755 PWNNF HNVIFDI QQIFNG + YN FL+ L +Y +T ++ +K Sbjct: 643 FPWNNFLHNVIFDIAQQIFNGPLKTGYNRFLLKDY--LVDAY--LTKKIVDADKAC---- 694 Query: 756 FSPVIRDPNFDFKITTDFILRGYQDSYKFYELRKMNLGYMGHIVLIAEEVVKFSKL---Y 812 QD K LR GYMGH+ L+AEE+ KF + Sbjct: 695 -----------------------QDYEKKTGLR---YGYMGHLTLVAEEISKFKEYIDEM 728 Query: 813 KVELISPDIQVILQTEEWQYYSEEVLNETRMMYSKILGGGSYIDDGNGNIIPQLPDNTTV 872 K+ + + L+ W+ YSE +L +TR Y+ +LG + + ++I + Sbjct: 729 KLTFCNTAVSDRLEEPFWKEYSETILADTREKYNTVLGDFGNDQESDDDVIRNSDSEDII 788 Query: 873 LTPNGDASNNNEILDSDTGSSNGTSGGGQLI-----NVESLEEQLSLSTESDLHNKLREM 927 G+ + N ++D SNG G + N E+ E + + SD+ NK Sbjct: 789 GDTEGNENYGNG--ENDELLSNGHDSGNMDLYYNFNNNENEENEEDYAEYSDVDNK---N 843 Query: 928 LINRAQEDVDNKNTENGVFILGPPEDKNSNSNINN--TNHNSNNSNNNDNNDNNDND 982 N + + D+ ++++G + K++ S + + H NS N++ND N +D Sbjct: 844 YYNNVETNDDDYDSDDG-------KSKSAESEFTDKISEHRDGNSLYNEDNDENGSD 893 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.313 0.133 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,388,246 Number of Sequences: 6497 Number of extensions: 434246 Number of successful extensions: 15051 Number of sequences better than 1.0e-30: 4 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 14858 Number of HSP's gapped (non-prelim): 28 length of query: 1002 length of database: 2,996,526 effective HSP length: 100 effective length of query: 902 effective length of database: 2,346,826 effective search space: 2116837052 effective search space used: 2116837052 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YFR038W Annotated|06:229367:231928| frame 2; YFR038W; Uncharacterized; this gene contains 1 exon (853 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YFR038W YFR038W SGDID:S0001934, Chr VI from 229366-231702 1534 0.0 YOR304W ISW2 SGDID:S0005831, Chr XV from 884507-887869 388 e-108 YBR245C ISW1 SGDID:S0000449, Chr II from 708108-711497, reverse ... 386 e-108 YOR290C SNF2 SGDID:S0005816, Chr XV from 855143-860254, reverse ... 376 e-105 YIL126W STH1 SGDID:S0001388, Chr IX from 117992-122071 375 e-104 YER164W CHD1 SGDID:S0000966, Chr V from 505387-509793 320 5e-88 YAL019W FUN30 SGDID:S0000017, Chr I from 114918-118313 292 2e-79 YGL150C INO80 SGDID:S0003118, Chr VII from 221107-225576, revers... 236 1e-62 YPL082C MOT1 SGDID:S0006003, Chr XVI from 398475-404078, reverse... 235 3e-62 YDR334W SWR1 SGDID:S0002742, Chr IV from 1135923-1140467 219 2e-57 >YFR038W YFR038W SGDID:S0001934, Chr VI from 229366-231702 Length = 778 Score = 1534 bits (3972), Expect = 0.0 Identities = 770/777 (99%), Positives = 773/777 (99%) Query: 1 MSRCSNAALMTVVEDAVGARVAARTRNMSNGVNYREKEVNDLTADISDSDSDLDSEDNKH 60 MSRCSNAALMTVVEDAVGARVAARTRNMSNGVNYREKEVNDLTADISDSDSDLDSEDNKH Sbjct: 1 MSRCSNAALMTVVEDAVGARVAARTRNMSNGVNYREKEVNDLTADISDSDSDLDSEDNKH 60 Query: 61 GKGDNDTAPIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSE 120 GKGDNDTAPIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSE Sbjct: 61 GKGDNDTAPIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSE 120 Query: 121 MDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEHSSKKRK 180 MDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEHSSKKRK Sbjct: 121 MDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEHSSKKRK 180 Query: 181 TKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENG 240 TKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENG Sbjct: 181 TKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENG 240 Query: 241 LNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLK 300 LNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLK Sbjct: 241 LNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLK 300 Query: 301 YYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNI 360 YYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNI Sbjct: 301 YYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNI 360 Query: 361 NCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNL 420 NCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNL Sbjct: 361 NCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNL 420 Query: 421 GSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTS 480 GSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTS Sbjct: 421 GSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTS 480 Query: 481 AQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDN 540 AQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDN Sbjct: 481 AQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDN 540 Query: 541 KINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLK 600 KINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLK Sbjct: 541 KINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLK 600 Query: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD Sbjct: 601 TSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKD 660 Query: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQES 720 QLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQES Sbjct: 661 QLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQES 720 Query: 721 PVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKKLALNEGSFLKANKAG 777 PVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKKLALNEG F + ++G Sbjct: 721 PVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKKLALNEGFFFEGKQSG 777 >YOR304W ISW2 SGDID:S0005831, Chr XV from 884507-887869 Length = 1120 Score = 388 bits (997), Expect = e-108 Identities = 268/829 (32%), Positives = 425/829 (51%), Gaps = 119/829 (14%) Query: 35 REKEVNDLTADISDSDSDL--DSEDNKHGKGDNDTAPIWLQDDVHSDEDIQLDSEDDSDT 92 +E++ +D S+S S++ D+ D+K +D D++ E++ D + Sbjct: 5 QEEQRSDTKNSKSESPSEVLVDTLDSKSNGSSDD-------DNIGQSEELS-----DKEI 52 Query: 93 EAVQAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLL 152 V+ + + A+ K +D + ++ K+ + K + + + ++ I Sbjct: 53 YTVEDRPPEYWAQRKKKFVLDVDPKYAKQKDKSDTYK--RFKYLLGVTDLFRHFIGIKAK 110 Query: 153 HRSNEV-------ANANTKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGA 205 H N ++AN S+S S RKT+K+ + +++ T Q Sbjct: 111 HDKNIQKLLKQLDSDANKLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEIVDTYQE-- 168 Query: 206 PDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFI- 264 D + P +K+ L+ YQ++GLNWLI+L+EN L+GILADEMGLGKT+Q+I+ L ++ Sbjct: 169 -DIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLR 227 Query: 265 YEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGT 324 Y +GPFL+ P STLDNW EF K+ P++ VL +G K+ A + Sbjct: 228 YVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGD---KDTRADIVRNIILEARF 284 Query: 325 GIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPL 384 ++ITSYE+++R+ + + W+++++DE HR+KN L + ++ + NRLL+TGTPL Sbjct: 285 DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPL 344 Query: 385 QNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISN 444 QNNL ELW+LLNF++PDIF D E+F++WF+ +NSE + Q+ +I Sbjct: 345 QNNLHELWALLNFLLPDIFGDSELFDEWFE--------QNNSE--------QDQEIVIQQ 388 Query: 445 LHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIK 504 LH++L PFLLRR+K V ++L PK E + MT Q ++YK+ L K Sbjct: 389 LHSVLNPFLLRRVKADVEKSLL-PKIETNVYVGMTDMQIQWYKSLLE------------K 435 Query: 505 DFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNK 564 D +N G V R Sbjct: 436 DIDAVN----GAVGKRE----------------------------------------GKT 451 Query: 565 KLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLI 624 +L N++MQLR+ + +LF P T E L+ SGK+ IL KL+ L +G +VLI Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511 Query: 625 YSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGL 684 +SQ +LD++ED+C F RIDGS ++E R + ++++N + +FLL+TRA GL Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGL 571 Query: 685 GINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANK 744 GINLV ADTV+LFDSDWNPQ DLQAMDR HRIGQ+ V VYR +N IE ++ RAA K Sbjct: 572 GINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQK 631 Query: 745 RNLERMVIQMGKFNNLKKLALNEGSFL-------------KANKAGVNVTNKDLVQELSM 791 L+++VIQ G L ++ L KA+K V+ D++++ Sbjct: 632 LRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEKKASKVTVDADIDDILKKGEQ 691 Query: 792 LLMSDESNIGFENGGQKENKATEGQLTDKEVEELTNRSLEAYKANRVVD 840 + E N +++ G + + G + ++ E +S + ++VV+ Sbjct: 692 --KTQELNAKYQSLGLDDLQKFNG-IENQSAYEWNGKSFQKKSNDKVVE 737 >YBR245C ISW1 SGDID:S0000449, Chr II from 708108-711497, reverse complement Length = 1129 Score = 386 bits (991), Expect = e-108 Identities = 229/600 (38%), Positives = 336/600 (56%), Gaps = 83/600 (13%) Query: 164 KDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILK 223 K N + ++RKT+ + + K++ ++D + + ++ N L+ Sbjct: 144 KANGKGKGKHQDVRRRKTEHEEDAELLKEEDSDDDESIE------FQFRESPAYVNGQLR 197 Query: 224 PYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFI-YEMDTKGPFLVTAPLSTL 282 PYQ++G+NWL++L++N + GILADEMGLGKT+Q+I+ L ++ Y GPFLV AP STL Sbjct: 198 PYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTL 257 Query: 283 DNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIM 342 +NW+ E ++ PD+ + G KE A+L +VI SYEII+R+ + Sbjct: 258 NNWLREINRWTPDVNA---FILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLK 314 Query: 343 SQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDI 402 NW+++I+DE HR+KN L + L++ + NRLL+TGTPLQNNL ELW+LLNF++PDI Sbjct: 315 KINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDI 374 Query: 403 FADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVL 462 F+D + F+ WF +S +E Q ++ LHT+L+PFLLRR+K V Sbjct: 375 FSDAQDFDDWFSSES----------------TEEDQDKIVKQLHTVLQPFLLRRIKSDVE 418 Query: 463 ANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSI 522 ++L PK+E + M+S Q+K+YK K L KD +N Sbjct: 419 TSLL-PKKELNLYVGMSSMQKKWYK------------KILEKDLDAVNGS---------- 455 Query: 523 RDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFL 582 +G++ S T +L N+MMQLR+ + +L Sbjct: 456 --------NGSKESKT--------------------------RLLNIMMQLRKCCNHPYL 481 Query: 583 FYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLN 642 F P T E L+ + KLQ+L KL+ L EG +VLI+SQ +LD++ED+C Sbjct: 482 FDGAEPGPPYTTDEHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFR 541 Query: 643 SFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWN 702 ++ RIDGS +E R ++ +N+ K +FLL+TRA GLGINL AD VVL+DSDWN Sbjct: 542 NYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWN 601 Query: 703 PQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKK 762 PQ DLQAMDR HRIGQ+ V V+RL DN++E IL RA K L+++VIQ + + KK Sbjct: 602 PQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKK 661 >YOR290C SNF2 SGDID:S0005816, Chr XV from 855143-860254, reverse complement Length = 1703 Score = 376 bits (965), Expect = e-105 Identities = 246/764 (32%), Positives = 396/764 (51%), Gaps = 131/764 (17%) Query: 90 SDTEAVQAQVVDKLAKDTKSEQKSLDDE-----LSEMDTKTVSLKLKKLNEF-------V 137 ++ E + + +K AK+ K+ D+E L + ++ L++ N F V Sbjct: 638 TNLERDEQKRAEKKAKERLQALKANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAV 697 Query: 138 RQSQVYSSIIADTLLHRSNEVAN-----ANTKDNSNSDDEEHSSKKRKTKKKSITDFFKK 192 + Q Y+ + D+ + ++E + KD DD+++S+ D++ Sbjct: 698 KDQQKYTKEMIDSHIKEASEEVDDLSMVPKMKDEEYDDDDDNSN----------VDYYNV 747 Query: 193 QKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLG 252 + ++ KQP +L LK YQ++GL W+++L+ N LNGILADEMGLG Sbjct: 748 AHRIKEDIK----------KQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLG 797 Query: 253 KTVQSIALLAFIYEM-DTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGT-NGYKER 310 KT+Q+I+LL ++YEM + +GP+LV PLSTL NW +EFAK+AP L + + G+ N K + Sbjct: 798 KTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAK 857 Query: 311 SAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELK- 369 AK++ G +V+T++E I+++ L+ W +I+DEGHR+KN +L L Sbjct: 858 QAKIR-----AGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNT 912 Query: 370 KINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEAL 429 + RL+LTGTPLQNNL ELW+LLNF++P IF + F++WF+ N G E Sbjct: 913 HYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE-- 970 Query: 430 NKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAG 489 +++E +I LH +L+PFLLRRLKK V LP K E ++ C M++ Q+ Y+ Sbjct: 971 ---LSEEETLLVIRRLHKVLRPFLLRRLKKDV-EKELPDKVEKVVKCKMSALQQIMYQQM 1026 Query: 490 LNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQM 549 L ++ L +IG +N+ + Sbjct: 1027 LK-------YRRL----------FIGDQNNKKM--------------------------- 1042 Query: 550 DKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLF--YFPYLHPEDLTLETLLKTSGKLQI 607 + + N +MQL++I + F+F ++P T + + + +GK ++ Sbjct: 1043 -----------VGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFEL 1091 Query: 608 LQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNS 667 L +++P L + GH+VLI+ Q ++D++ED+ + R+DG ++ R + L FN+ Sbjct: 1092 LDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNA 1151 Query: 668 SKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRL 727 ++ F+LSTRA GLG+NL ADTV++FD+DWNP DLQA DR HRIGQ++ V + RL Sbjct: 1152 PDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL 1211 Query: 728 CCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKKLALNEGSFLKANKAGVNVTNKDLVQ 787 N++E VIL RA K +++ VIQ GKF+N T+++ Sbjct: 1212 ITTNSVEEVILERAYKKLDIDGKVIQAGKFDN-------------------KSTSEEQEA 1252 Query: 788 ELSMLLMSDESNIGFENGGQKENKATEGQLTDKEVEELTNRSLE 831 L LL ++E G +E E +L D E+ E+ R+ E Sbjct: 1253 LLRSLLDAEEERRKKRESGVEE----EEELKDSEINEILARNDE 1292 >YIL126W STH1 SGDID:S0001388, Chr IX from 117992-122071 Length = 1359 Score = 375 bits (962), Expect = e-104 Identities = 235/682 (34%), Positives = 363/682 (53%), Gaps = 101/682 (14%) Query: 100 VDKLAKDTKSEQKSLDDE--LSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNE 157 +++ AK + KS D+E L +D K ++ + +RQ+ + +++ + + NE Sbjct: 370 IERTAKQRLAALKSNDEEAYLKLLD----QTKDTRITQLLRQTNSFLDSLSEAVRAQQNE 425 Query: 158 VANANTKDNSNSDDEEHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLL 217 + ++ DEE TD+++ + ++ KQP +L Sbjct: 426 AKILHGEEVQPITDEEREK----------TDYYEVAHRIKEKID----------KQPSIL 465 Query: 218 KNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTK-GPFLVT 276 LK YQL GL W+++LY N LNGILADEMGLGKT+QSI+L+ ++YE+ GPFLV Sbjct: 466 VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVI 525 Query: 277 APLSTLDNWMNEFAKFAPDLPVLKYYGTNGYK---ERSAKLKNFFKQHGGTGIVITSYEI 333 PLST+ NW EF K+AP L + Y GT + + ++ NF +++T+YE Sbjct: 526 VPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNF-------DVLLTTYEY 578 Query: 334 ILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKK-INTSNRLLLTGTPLQNNLAELW 392 I++D L+ +W +I+DEGHR+KN +L + T NRL+LTGTPLQNNL ELW Sbjct: 579 IIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELW 638 Query: 393 SLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPF 452 +LLNF++P IF + F WF+ N G+ E + +E +I LH +L+PF Sbjct: 639 ALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLE-----LTEEETLLIIRRLHKVLRPF 693 Query: 453 LLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKDFFTLNDE 512 LLRRLKK V + LP K E +I C ++ Q++ Y ++++K N Sbjct: 694 LLRRLKKEVEKD-LPDKVEKVIKCKLSGLQQQLY-------------QQMLKH----NAL 735 Query: 513 YIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQ 572 ++G + + + I +NKI MQ Sbjct: 736 FVGAGTEGATKGGI---------KGLNNKI----------------------------MQ 758 Query: 573 LRQIIDSTFLF--YFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVN 630 LR+I + F+F ++P + L + +GK ++L +++P + GH+VL++ Q Sbjct: 759 LRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQ 818 Query: 631 MLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVG 690 ++D++ED+ + R+DGS E R + L FN+ + FLLSTRA GLG+NL Sbjct: 819 VMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQT 878 Query: 691 ADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERM 750 ADTV++FD+DWNP DLQA DR HRIGQ++ V + RL +++E VIL RA K +++ Sbjct: 879 ADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGK 938 Query: 751 VIQMGKFNNLKKLALNEGSFLK 772 VIQ GKF+N K A + +FL+ Sbjct: 939 VIQAGKFDN-KSTAEEQEAFLR 959 >YER164W CHD1 SGDID:S0000966, Chr V from 505387-509793 Length = 1468 Score = 320 bits (821), Expect = 5e-88 Identities = 207/564 (36%), Positives = 300/564 (53%), Gaps = 80/564 (14%) Query: 213 QPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAF-IYEMDTKG 271 QP +K L+ +QL G+NW+ L+ G NGILADEMGLGKTVQ++A +++ I+ G Sbjct: 367 QPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNG 426 Query: 272 PFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTG------ 325 P ++ PLST+ W++ F K+APDL + Y G ++ + + F+ G Sbjct: 427 PHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYE-FYTNPRAKGKKTMKF 485 Query: 326 -IVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPL 384 +++T+YE IL+D + S W+F+ VDE HRLKN L + L +NR+L+TGTPL Sbjct: 486 NVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPL 545 Query: 385 QNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISN 444 QNN+ EL +L+NF+MP F ++ DF++ DE Q+ I + Sbjct: 546 QNNIKELAALVNFLMPGRFT----IDQEIDFEN----------------QDEEQEEYIHD 585 Query: 445 LHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIK 504 LH ++PF+LRRLKK V LP K E I+ ++ Q ++YK L K Sbjct: 586 LHRRIQPFILRRLKKDV-EKSLPSKTERILRVELSDVQTEYYK------------NILTK 632 Query: 505 DFFTLN-DEYIGHVSNRSIRDFINYKLSGNETSNTDNKINPTLLQMDKLYKKNLQMEISN 563 ++ L GH S +I NE N +P L D ++ LQ Sbjct: 633 NYSALTAGAKGGHFSLLNIM---------NELKKASN--HPYL--FDNAEERVLQKFGDG 679 Query: 564 KKLQNMMMQLRQIIDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVL 623 K + + L L+ +SGK+ +L +L+ L +GH+VL Sbjct: 680 KMTR------------------------ENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVL 715 Query: 624 IYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAG 683 I+SQ V MLD++ D+ + R+DG+V + R+ ++ FNS +FLLSTRA G Sbjct: 716 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGG 775 Query: 684 LGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAAN 743 LGINL+ ADTVV+FDSDWNPQ DLQAM R HRIGQ++ V+VYRL +T+E +L RA Sbjct: 776 LGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARK 835 Query: 744 KRNLERMVIQMGKFNNLKKLALNE 767 K LE +I +G + K NE Sbjct: 836 KMILEYAIISLGVTDGNKYTKKNE 859 >YAL019W FUN30 SGDID:S0000017, Chr I from 114918-118313 Length = 1131 Score = 292 bits (747), Expect = 2e-79 Identities = 232/725 (32%), Positives = 358/725 (49%), Gaps = 55/725 (7%) Query: 62 KGDNDTAPIWL--QDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELS 119 +GDN + +DD ++D D+ + ++ A K +DTK+ + D+ + Sbjct: 393 EGDNSELDLMNLGEDDDDDNDDGNNDNNNSNNNNTAGADATSKEKEDTKAVVEGFDETSA 452 Query: 120 EMDTKTVSLKLKKLNEFVRQS-----------QVYSSIIADTLLHRSNEVANANTKDNSN 168 E +++ + +R + V I D L +E + +D Sbjct: 453 EPTPAPAPAPVERETKRIRNTTKPKVVEDEDDDVDLEAIDDELPQSEHEDDDYEEEDEDY 512 Query: 169 SDDEEHSSKKRKTKKKSITDFFKKQKKNE---DTTTQNGAPDDAAI--KQPRLLKNCI-L 222 +D+EE D F +KN TT++NG +PRLL I L Sbjct: 513 NDEEEDVEYDDGDDDDDDDDEFVATRKNTHVISTTSRNGRKPIVKFFKGKPRLLSPEISL 572 Query: 223 KPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTL 282 K YQ G+NWL LY+N ++ ILAD+MGLGKT Q I+ A++ +++ GP LV P STL Sbjct: 573 KDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEPGPHLVVVPSSTL 632 Query: 283 DNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGT-GIVITSYEIIL---RDT 338 +NW+ EF KFAP L + YYG+ +E +L++ +++ G +++T+Y + D Sbjct: 633 ENWLREFQKFAPALKIEPYYGSLQERE---ELRDILERNAGKYDVIVTTYNLAAGNKYDV 689 Query: 339 DLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFI 398 + ++N+ ++ DEGH LKN +L KI + RLLLTGTPLQNNL EL SLL FI Sbjct: 690 SFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFI 749 Query: 399 MPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLK 458 MP++F +K FD++ ++ NK N L + I+ T++KPF+LRR K Sbjct: 750 MPNLF-----ISKKESFDAIFKQRAKTTDD-NKNHNPLLAQEAITRAKTMMKPFILRRRK 803 Query: 459 KVVLANILPPKREYIINCPMTSAQEKFYKAGLNGKLK-KTMFK--ELIKDFFTLNDEYIG 515 VL + LPPK +I C + + Q+K Y + L+ K M K EL KD + Sbjct: 804 DQVLKH-LPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSS 862 Query: 516 HVSN--RSIRDFINYKLSGNETSNTD--NKINPTLLQMDKLYKKNLQMEISNKKLQNMM- 570 N ++R + L N K++ +L + Y +N E + + M Sbjct: 863 SSKNLIMALRKASLHPLLFRNIYNDKIITKMSDAILD-EPAYAENGNKEYIKEDMSYMTD 921 Query: 571 MQLRQI---IDSTFLFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLI-SEGHKVLIYS 626 +L ++ +T Y LH ++ SGK+ L+KL+ +I + KVLI+S Sbjct: 922 FELHKLCCNFPNTLSKY--QLHNDE------WMQSGKIDALKKLLKTIIVDKQEKVLIFS 973 Query: 627 QFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGI 686 F +LD++E + R+DGS R+ ++KF KD IF+LST+A G GI Sbjct: 974 LFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKD-IPIFILSTKAGGFGI 1032 Query: 687 NLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRN 746 NLV A+ V++FD +NP D QA DR HR+GQ V + L ++IE I A NK Sbjct: 1033 NLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLA 1092 Query: 747 LERMV 751 L+ + Sbjct: 1093 LDSYI 1097 >YGL150C INO80 SGDID:S0003118, Chr VII from 221107-225576, reverse complement Length = 1489 Score = 236 bits (602), Expect = 1e-62 Identities = 148/424 (34%), Positives = 228/424 (53%), Gaps = 58/424 (13%) Query: 108 KSEQKSLDDELSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNS 167 K E+++++ E + K + KKLN + Q+++YS I + ++NE+ N N Sbjct: 556 KIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSHFIGRKI--KTNELEGNNVSSND 613 Query: 168 -------------------------NSDDEE----------HSSKKRKTKKKSITDFFKK 192 N +DE+ ++ + + K K D Sbjct: 614 SESQKNIDISALAPNKNDFHAIDFDNENDEQLRLRAAENASNALAETRAKAKQFDDHANA 673 Query: 193 QKKNEDTTTQN----GAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADE 248 ++ E+ N + + I+QP++L C LK YQL+GLNWL LY+ G+NGILADE Sbjct: 674 HEEEEEEDELNFQNPTSLGEITIEQPKILA-CTLKEYQLKGLNWLANLYDQGINGILADE 732 Query: 249 MGLGKTVQSIALLAFIYEM-DTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGY 307 MGLGKTVQSI++LA + E + GPFLV P STL NW+NE +KF P +L Y+G Sbjct: 733 MGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNAND 792 Query: 308 KERSAKL---KNF-FKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCR 363 ++ K KN + ++ +++TSY++++ D + + W+++I+DE +K+ Sbjct: 793 RKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSS 852 Query: 364 LIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSG 423 K L + NRLLLTGTP+QN++ ELW+LL+FIMP +F + FN+WF D Sbjct: 853 RWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKD-----IE 907 Query: 424 SNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQE 483 S++EA KL +L++ LH ILKPF+LRR+KK V + L K E + C +T Q Sbjct: 908 SHAEANTKLNQQQLRR-----LHMILKPFMLRRVKKNVQSE-LGDKIEIDVLCDLTQRQA 961 Query: 484 KFYK 487 K Y+ Sbjct: 962 KLYQ 965 Score = 142 bits (359), Expect = 2e-34 Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 5/202 (2%) Query: 594 TLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSV 653 +++ + S KL+ L +L+ L SEGH+VLIY Q M+DL+E++ + R+DGS Sbjct: 1290 SMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSS 1349 Query: 654 NNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRC 713 E R+D + + ++ + +FLLSTRA GLGINL ADTV+ +DSDWNP +D QAMDR Sbjct: 1350 KLEDRRDLVHDWQTNPEIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRA 1408 Query: 714 HRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKF--NNLKKLALNEGSFL 771 HR+GQ V VYRL TIE + RA K ++++V++ GK N+K + + E Sbjct: 1409 HRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVME-GKTQEKNIKTIEVGEND-S 1466 Query: 772 KANKAGVNVTNKDLVQELSMLL 793 + + G ++D ++E + L Sbjct: 1467 EVTREGSKSISQDGIKEAASAL 1488 >YPL082C MOT1 SGDID:S0006003, Chr XVI from 398475-404078, reverse complement Length = 1867 Score = 235 bits (599), Expect = 3e-62 Identities = 181/587 (30%), Positives = 282/587 (48%), Gaps = 75/587 (12%) Query: 193 QKKNEDTTTQNGAPDDAA-IKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADEMGL 251 +++ D Q P A K P +K L+ YQ +G+NWL L + L+GIL D+MGL Sbjct: 1243 RERERDFIQQMMDPSKAKPFKLPIAIK-ATLRKYQQDGVNWLAFLNKYHLHGILCDDMGL 1301 Query: 252 GKTVQSIALLA---FIYEMDTKG---------PFLVTAPLSTLDNWMNEFAKFAPDLPVL 299 GKT+Q+I ++A ++ + D + P L+ P S +W NEF ++AP L V+ Sbjct: 1302 GKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVV 1361 Query: 300 KYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKN 359 Y G + Q I++TSY++ D ++ + + ++DEGH +KN Sbjct: 1362 VYAGGPTVR------LTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKN 1415 Query: 360 INCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLN 419 +L K +K+I ++RL+LTGTP+QNN+ ELWSL +F+MP ++F + F + Sbjct: 1416 SQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERF---AKP 1472 Query: 420 LGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMT 479 + + NS+ +K E + LH + PF+LRRLK+ VL++ LPPK C + Sbjct: 1473 IAASRNSKTSSK--EQEAGVLALEALHKQVLPFMLRRLKEDVLSD-LPPKIIQDYYCELG 1529 Query: 480 SAQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTD 539 Q K+L DF + ++ + + +E ++ Sbjct: 1530 DLQ-----------------KQLYMDF------------TKKQKNVVEKDIENSEIADGK 1560 Query: 540 NKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLH-PEDLTLETL 598 I L M KL + N + Q++ + T L ++ P+ L TL Sbjct: 1561 QHIFQALQYMRKLCNHPALVLSPN---HPQLAQVQDYLKQTGLDLHDIINAPKLSALRTL 1617 Query: 599 LKTSG--------KLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDL-----NSFA 645 L G K Q + H+ LI+ Q +MLD++E+ DL S Sbjct: 1618 LFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVEN--DLFKKYMPSVT 1675 Query: 646 TFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQV 705 R+DGS++ R+ + KFN + LL+T+ GLG+NL GADTV+ + DWNP Sbjct: 1676 YMRLDGSIDPRDRQKVVRKFNED-PSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMN 1734 Query: 706 DLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVI 752 DLQAMDR HRIGQ+ V VYR+ T+E I+ K N+ V+ Sbjct: 1735 DLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVV 1781 >YDR334W SWR1 SGDID:S0002742, Chr IV from 1135923-1140467 Length = 1514 Score = 219 bits (557), Expect = 2e-57 Identities = 177/609 (29%), Positives = 283/609 (46%), Gaps = 70/609 (11%) Query: 13 VEDAVGARVAARTRNMSNGVNYREK----EVNDLTADISDSDSDLDSEDNKHGKGDNDTA 68 +E++ + A T N + +EK + D + D + D + Sbjct: 510 LENSPASTEATPTDESLNLIQLKEKYGHFNGSSTVYDSRNKDEKFPTLDKHESSSSESSV 569 Query: 69 PIWLQDDVHSDEDIQLDSEDDSDTEAVQAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSL 128 + ++S + + +E+D +++ + V A K E+ D +L + + TV+ Sbjct: 570 MTGEESSIYSSSENESQNENDRESDD-KTPSVGLSALFGKGEESDGDLDLDDSEDFTVNS 628 Query: 129 KLKKLNEFVRQSQVYSSIIADTLLHRSNEVANANTKDNSNSDDEEHSSKKRKTKKKSITD 188 + E + + QV +S A T + V N + D EE + K + ++ S+ D Sbjct: 629 SSVE-GEELEKDQVDNS--AATFERAGDFVHTQNENRDDIKDVEEDAETKVQEEQLSVVD 685 Query: 189 FFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCILKPYQLEGLNWLITLYENGLNGILADE 248 + P LL+ L+ YQ +GLNWL +LY N NGILADE Sbjct: 686 ----------------------VPVPSLLRGN-LRTYQKQGLNWLASLYNNHTNGILADE 722 Query: 249 MGLGKTVQSIALLAFIY-EMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGY 307 MGLGKT+Q+I+LLA++ E + GP L+ P S L NW EF +FAP VL YYG+ Sbjct: 723 MGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSP-- 780 Query: 308 KERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKE 367 ++R K K + K + I SY+++++D + W+++++DE H +KN + Sbjct: 781 QQRKEKRKGWNKPDA-FHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQA 839 Query: 368 LKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDI---------FADFEIFNKWF--DFD 416 L NT RLLLTGTPLQNNLAELWSLL F+MP FAD + F +WF D Sbjct: 840 LLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVD 899 Query: 417 SLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINC 476 + + +G N D+ K ++ LH +L+P+LLRRLK V +P K E+I+ C Sbjct: 900 KI-IETGQN------FGQDKETKKTVAKLHQVLRPYLLRRLKADV-EKQMPAKYEHIVYC 951 Query: 477 PMTSAQEKFY-----KAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLS 531 ++ Q Y +A L F ++ L + H + +R + + Sbjct: 952 KLSKRQRFLYDDFMSRAQTKATLASGNFMSIVNCLMQLR-KVCNHPNLFEVRPILTSFVL 1010 Query: 532 GNETSNTDNKINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQIIDSTFLFYFPYLHPE 591 + ++ + TLL KL+KKN Q+ + N++ L D Y H E Sbjct: 1011 EHCVASDYKDVERTLL---KLFKKNNQVNRVDLDFLNLVFTLN---DKDLTSY----HAE 1060 Query: 592 DLTLETLLK 600 +++ T +K Sbjct: 1061 EISKLTCVK 1069 Score = 149 bits (377), Expect = 1e-36 Identities = 95/259 (36%), Positives = 143/259 (55%), Gaps = 24/259 (9%) Query: 603 GKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQL 662 GKLQ L L+ L GH+ LI++Q +LD++E + + + + R+DG+ E R+ Sbjct: 1246 GKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILT 1305 Query: 663 EKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPV 722 E+FN+ + +F+LS+R+ GLGINL GADTV+ +DSDWNP +D Q DRCHRIGQ V Sbjct: 1306 ERFNTDS-RITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDV 1364 Query: 723 IVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNN--LKKLALNE--GSFLKANKAG- 777 +YR ++TIE IL +A KR L+ +VIQ G F KL++ + GS L N +G Sbjct: 1365 HIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSELPENASGG 1424 Query: 778 -------VNVTNKDLVQ-ELSMLLMSDESNIGFENGGQKE--------NKATEGQLTDKE 821 +V KD Q E + DE ++ N +E +++TE + ++E Sbjct: 1425 DKPLIADADVAAKDPRQLERLLAQAEDEDDVKAANLAMREVEIDNDDFDESTEKKAANEE 1484 Query: 822 VEELTNRSLEAYKANRVVD 840 E + L+ Y+ VD Sbjct: 1485 EE--NHAELDEYEGTAHVD 1501 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.315 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,480,078 Number of Sequences: 6497 Number of extensions: 281344 Number of successful extensions: 2731 Number of sequences better than 1.0e-30: 10 Number of HSP's better than 0.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 2628 Number of HSP's gapped (non-prelim): 43 length of query: 853 length of database: 2,996,526 effective HSP length: 99 effective length of query: 754 effective length of database: 2,353,323 effective search space: 1774405542 effective search space used: 1774405542 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YFR045W Annotated|06:242129:242986| frame 2; YFR045W; Uncharacterized; this gene contains 1 exon (285 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YFR045W YFR045W SGDID:S0001941, Chr VI from 242450-242986 349 3e-97 >YFR045W YFR045W SGDID:S0001941, Chr VI from 242450-242986 Length = 178 Score = 349 bits (895), Expect = 3e-97 Identities = 178/178 (100%), Positives = 178/178 (100%) Query: 108 MIDHKKLEKNQPVVNAKATFHKVATKSTPVARIEKLLPAVKHMYQTRGPAAFVQGTTATI 167 MIDHKKLEKNQPVVNAKATFHKVATKSTPVARIEKLLPAVKHMYQTRGPAAFVQGTTATI Sbjct: 1 MIDHKKLEKNQPVVNAKATFHKVATKSTPVARIEKLLPAVKHMYQTRGPAAFVQGTTATI 60 Query: 168 FRQIANTSIQFTAYTAFKRLLQARNDKASSVITGLATSFTLVAMTQPIDVVKTRMMSQNA 227 FRQIANTSIQFTAYTAFKRLLQARNDKASSVITGLATSFTLVAMTQPIDVVKTRMMSQNA Sbjct: 61 FRQIANTSIQFTAYTAFKRLLQARNDKASSVITGLATSFTLVAMTQPIDVVKTRMMSQNA 120 Query: 228 KTEYKNTLNCMYRIFVQEGMATFWKGSIFRFMKVGISGGLTFTVYEQVSLLLGFSSRS 285 KTEYKNTLNCMYRIFVQEGMATFWKGSIFRFMKVGISGGLTFTVYEQVSLLLGFSSRS Sbjct: 121 KTEYKNTLNCMYRIFVQEGMATFWKGSIFRFMKVGISGGLTFTVYEQVSLLLGFSSRS 178 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.323 0.135 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,502,901 Number of Sequences: 6497 Number of extensions: 60012 Number of successful extensions: 316 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 315 Number of HSP's gapped (non-prelim): 1 length of query: 285 length of database: 2,996,526 effective HSP length: 89 effective length of query: 196 effective length of database: 2,418,293 effective search space: 473985428 effective search space used: 473985428 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YFL007W Annotated|06:123474:129905| frame 3; YFL007W/BLM3; Verified; this gene contains 1 exon (2143 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YFL007W BLM3 SGDID:S0001887, Chr VI from 123474-128888 3596 0.0 YFL006W YFL006W SGDID:S0001888, Chr VI from 129140-129904 505 e-143 >YFL007W BLM3 SGDID:S0001887, Chr VI from 123474-128888 Length = 1804 Score = 3596 bits (9324), Expect = 0.0 Identities = 1799/1799 (100%), Positives = 1799/1799 (100%) Query: 1 MTANNDDDIKSPIPITNKTLSQLKRFERSPGRPSSSQGEIKRKKSRLYAADGRPHSPLRA 60 MTANNDDDIKSPIPITNKTLSQLKRFERSPGRPSSSQGEIKRKKSRLYAADGRPHSPLRA Sbjct: 1 MTANNDDDIKSPIPITNKTLSQLKRFERSPGRPSSSQGEIKRKKSRLYAADGRPHSPLRA 60 Query: 61 RSATPTLQDQKLFNGMDSTSLLNERLQHYTLDYVSDRAQHMKNIYDPSSRWFSRSVRPEF 120 RSATPTLQDQKLFNGMDSTSLLNERLQHYTLDYVSDRAQHMKNIYDPSSRWFSRSVRPEF Sbjct: 61 RSATPTLQDQKLFNGMDSTSLLNERLQHYTLDYVSDRAQHMKNIYDPSSRWFSRSVRPEF 120 Query: 121 PIEEFLPYKTESHEDQAKYLCHVLVNLYIAISSLDIQGLISISSKDLADLKKEVDDLALK 180 PIEEFLPYKTESHEDQAKYLCHVLVNLYIAISSLDIQGLISISSKDLADLKKEVDDLALK Sbjct: 121 PIEEFLPYKTESHEDQAKYLCHVLVNLYIAISSLDIQGLISISSKDLADLKKEVDDLALK 180 Query: 181 TDLFRLSNNTAENDLLGNDIADYDDAEGLEDELDEYFDLAGPDFNATGKITAKSATIVNV 240 TDLFRLSNNTAENDLLGNDIADYDDAEGLEDELDEYFDLAGPDFNATGKITAKSATIVNV Sbjct: 181 TDLFRLSNNTAENDLLGNDIADYDDAEGLEDELDEYFDLAGPDFNATGKITAKSATIVNV 240 Query: 241 NHWTNELKNCLHFDFPVALRKSLATVYYYLSLVQGQKVYRQMHVDMFERLVSLDDDRTNF 300 NHWTNELKNCLHFDFPVALRKSLATVYYYLSLVQGQKVYRQMHVDMFERLVSLDDDRTNF Sbjct: 241 NHWTNELKNCLHFDFPVALRKSLATVYYYLSLVQGQKVYRQMHVDMFERLVSLDDDRTNF 300 Query: 301 TELLQKQGLLLDHQIMLNFLCEFLPYPDPDYARYELSSKEDLQLFRLLLKHAHNAKPFFD 360 TELLQKQGLLLDHQIMLNFLCEFLPYPDPDYARYELSSKEDLQLFRLLLKHAHNAKPFFD Sbjct: 301 TELLQKQGLLLDHQIMLNFLCEFLPYPDPDYARYELSSKEDLQLFRLLLKHAHNAKPFFD 360 Query: 361 KSKESLLVDTMNFLLSSLAPSTMMAVMPIVTSVVPYHYHIHSKIIDYFPFCYSIWSSVSA 420 KSKESLLVDTMNFLLSSLAPSTMMAVMPIVTSVVPYHYHIHSKIIDYFPFCYSIWSSVSA Sbjct: 361 KSKESLLVDTMNFLLSSLAPSTMMAVMPIVTSVVPYHYHIHSKIIDYFPFCYSIWSSVSA 420 Query: 421 NVAIDTHMYDFVGSISKDVHNKILSSEHEKDVVGVEFGEFGIFTDDQMTFMFNRLQGHLR 480 NVAIDTHMYDFVGSISKDVHNKILSSEHEKDVVGVEFGEFGIFTDDQMTFMFNRLQGHLR Sbjct: 421 NVAIDTHMYDFVGSISKDVHNKILSSEHEKDVVGVEFGEFGIFTDDQMTFMFNRLQGHLR 480 Query: 481 TDGQIHSYSRTVKPFVYAINGSKKDRFFEKLVSLAKAIETFIHPSNNGFWTKPNAKFVHA 540 TDGQIHSYSRTVKPFVYAINGSKKDRFFEKLVSLAKAIETFIHPSNNGFWTKPNAKFVHA Sbjct: 481 TDGQIHSYSRTVKPFVYAINGSKKDRFFEKLVSLAKAIETFIHPSNNGFWTKPNAKFVHA 540 Query: 541 FIKSYHGRVKYEEDICARGVTNGICLTSFCHEEIVEIFLNIISLGSQNKNPDIANYYISC 600 FIKSYHGRVKYEEDICARGVTNGICLTSFCHEEIVEIFLNIISLGSQNKNPDIANYYISC Sbjct: 541 FIKSYHGRVKYEEDICARGVTNGICLTSFCHEEIVEIFLNIISLGSQNKNPDIANYYISC 600 Query: 601 FAYLLELDPSNAYLIYDKILIDLYDTLADQFINSRHRIISSLKQFTRVIRFIVMDKLYRV 660 FAYLLELDPSNAYLIYDKILIDLYDTLADQFINSRHRIISSLKQFTRVIRFIVMDKLYRV Sbjct: 601 FAYLLELDPSNAYLIYDKILIDLYDTLADQFINSRHRIISSLKQFTRVIRFIVMDKLYRV 660 Query: 661 HITNVLSMLVSKLDMNDTNLTSNLINGIVSIAAFIPIQDLTGEDDYISFESDTLPLVQQH 720 HITNVLSMLVSKLDMNDTNLTSNLINGIVSIAAFIPIQDLTGEDDYISFESDTLPLVQQH Sbjct: 661 HITNVLSMLVSKLDMNDTNLTSNLINGIVSIAAFIPIQDLTGEDDYISFESDTLPLVQQH 720 Query: 721 FYHIKCGESSKTFRVDDELLNNAFKASTTVFQSMLKVYVEKIFQLVDVDLEDSLVTKINQ 780 FYHIKCGESSKTFRVDDELLNNAFKASTTVFQSMLKVYVEKIFQLVDVDLEDSLVTKINQ Sbjct: 721 FYHIKCGESSKTFRVDDELLNNAFKASTTVFQSMLKVYVEKIFQLVDVDLEDSLVTKINQ 780 Query: 781 TTMILQESMDDKIFNYFASLLQRNFWSNDSFKEKDPNYELVTIPLAALVRRNNGLSKELV 840 TTMILQESMDDKIFNYFASLLQRNFWSNDSFKEKDPNYELVTIPLAALVRRNNGLSKELV Sbjct: 781 TTMILQESMDDKIFNYFASLLQRNFWSNDSFKEKDPNYELVTIPLAALVRRNNGLSKELV 840 Query: 841 RTLLFHIKEQIKRGAGSVRSTSEIQQRDVKLVLYLTALNDVLRQCHESLLEYSDELITFM 900 RTLLFHIKEQIKRGAGSVRSTSEIQQRDVKLVLYLTALNDVLRQCHESLLEYSDELITFM Sbjct: 841 RTLLFHIKEQIKRGAGSVRSTSEIQQRDVKLVLYLTALNDVLRQCHESLLEYSDELITFM 900 Query: 901 KYLYDNVTNPPLDVITSIVIHSALATLCTTEITDCRLFPEDSKIPEKDRWGGLQFDPRRF 960 KYLYDNVTNPPLDVITSIVIHSALATLCTTEITDCRLFPEDSKIPEKDRWGGLQFDPRRF Sbjct: 901 KYLYDNVTNPPLDVITSIVIHSALATLCTTEITDCRLFPEDSKIPEKDRWGGLQFDPRRF 960 Query: 961 DKQHLSFQWHVPSSDEITLSISILESLSEYCINNVEELMKAPRHDSEYGDMIQKYVLVMT 1020 DKQHLSFQWHVPSSDEITLSISILESLSEYCINNVEELMKAPRHDSEYGDMIQKYVLVMT Sbjct: 961 DKQHLSFQWHVPSSDEITLSISILESLSEYCINNVEELMKAPRHDSEYGDMIQKYVLVMT 1020 Query: 1021 HTLSGSSLLFDPDFNKYRTQSNLSYREKLILLKNIRENNCDPQELDIDIEQIRSGKDDED 1080 HTLSGSSLLFDPDFNKYRTQSNLSYREKLILLKNIRENNCDPQELDIDIEQIRSGKDDED Sbjct: 1021 HTLSGSSLLFDPDFNKYRTQSNLSYREKLILLKNIRENNCDPQELDIDIEQIRSGKDDED 1080 Query: 1081 YIESKDIEAGLNAGVSDVVQLRDEFPDELIVDEEVVSEMPSGVNTPIAGTHGTDNSAMSS 1140 YIESKDIEAGLNAGVSDVVQLRDEFPDELIVDEEVVSEMPSGVNTPIAGTHGTDNSAMSS Sbjct: 1081 YIESKDIEAGLNAGVSDVVQLRDEFPDELIVDEEVVSEMPSGVNTPIAGTHGTDNSAMSS 1140 Query: 1141 DLAFRDLDIYTCNYYFGNTTEEKLQNPQYLQVHRVRARIGHFFHKLYVFLSTNFENNTNM 1200 DLAFRDLDIYTCNYYFGNTTEEKLQNPQYLQVHRVRARIGHFFHKLYVFLSTNFENNTNM Sbjct: 1141 DLAFRDLDIYTCNYYFGNTTEEKLQNPQYLQVHRVRARIGHFFHKLYVFLSTNFENNTNM 1200 Query: 1201 FQILLHGLKVWFTDLGQETVFNEDPNAFIDVDFLENVQSLSHVNEPFTRTNFAIRANSLH 1260 FQILLHGLKVWFTDLGQETVFNEDPNAFIDVDFLENVQSLSHVNEPFTRTNFAIRANSLH Sbjct: 1201 FQILLHGLKVWFTDLGQETVFNEDPNAFIDVDFLENVQSLSHVNEPFTRTNFAIRANSLH 1260 Query: 1261 QSRVLLHSTNRKASKLENLLLVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGVVINK 1320 QSRVLLHSTNRKASKLENLLLVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGVVINK Sbjct: 1261 QSRVLLHSTNRKASKLENLLLVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGVVINK 1320 Query: 1321 IIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMTDYKDIGRLIFLLIECCRVNELEIGM 1380 IIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMTDYKDIGRLIFLLIECCRVNELEIGM Sbjct: 1321 IIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMTDYKDIGRLIFLLIECCRVNELEIGM 1380 Query: 1381 YADKILTDIVIGIKIPSSVCVISDQAFLPLAPPDGTINLQVEAVKLAKKKKREYYLSLLV 1440 YADKILTDIVIGIKIPSSVCVISDQAFLPLAPPDGTINLQVEAVKLAKKKKREYYLSLLV Sbjct: 1381 YADKILTDIVIGIKIPSSVCVISDQAFLPLAPPDGTINLQVEAVKLAKKKKREYYLSLLV 1440 Query: 1441 DLQDKLLDKLDNEKDMGWKIRMFILRFVTQIQSNLESKPDKRAVFSIISQISTKHPEIIH 1500 DLQDKLLDKLDNEKDMGWKIRMFILRFVTQIQSNLESKPDKRAVFSIISQISTKHPEIIH Sbjct: 1441 DLQDKLLDKLDNEKDMGWKIRMFILRFVTQIQSNLESKPDKRAVFSIISQISTKHPEIIH 1500 Query: 1501 LVVKSLLSTCNKIISLSDYEYDITRAYKNEFNPSFVEILDTSTTSFPKTFTEEMNNFDNP 1560 LVVKSLLSTCNKIISLSDYEYDITRAYKNEFNPSFVEILDTSTTSFPKTFTEEMNNFDNP Sbjct: 1501 LVVKSLLSTCNKIISLSDYEYDITRAYKNEFNPSFVEILDTSTTSFPKTFTEEMNNFDNP 1560 Query: 1561 KYFIDLRAYVGWLCWGRLMYVMSPKALKLNLRENELEVLKTAGHLLTREFLRDVTMNLVQ 1620 KYFIDLRAYVGWLCWGRLMYVMSPKALKLNLRENELEVLKTAGHLLTREFLRDVTMNLVQ Sbjct: 1561 KYFIDLRAYVGWLCWGRLMYVMSPKALKLNLRENELEVLKTAGHLLTREFLRDVTMNLVQ 1620 Query: 1621 DNETRGVFSSGNVSFFSLVILLISSGFCELNMSDLFELCESYYNKDDKASMIMSVEIVAG 1680 DNETRGVFSSGNVSFFSLVILLISSGFCELNMSDLFELCESYYNKDDKASMIMSVEIVAG Sbjct: 1621 DNETRGVFSSGNVSFFSLVILLISSGFCELNMSDLFELCESYYNKDDKASMIMSVEIVAG 1680 Query: 1681 LVCGSKFMSVSDLDKRDTFIENFLAKCLDYELNHDAFEIWSTLAWWLPAVVDLRRSKTFF 1740 LVCGSKFMSVSDLDKRDTFIENFLAKCLDYELNHDAFEIWSTLAWWLPAVVDLRRSKTFF Sbjct: 1681 LVCGSKFMSVSDLDKRDTFIENFLAKCLDYELNHDAFEIWSTLAWWLPAVVDLRRSKTFF 1740 Query: 1741 CHFINADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDELVFDHPYDQVRQ 1799 CHFINADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDELVFDHPYDQVRQ Sbjct: 1741 CHFINADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDELVFDHPYDQVRQ 1799 >YFL006W YFL006W SGDID:S0001888, Chr VI from 129140-129904 Length = 254 Score = 505 bits (1301), Expect = e-143 Identities = 254/254 (100%), Positives = 254/254 (100%) Query: 1890 MARGPNKVLLVPYLVDYVLPFLIGLVKHKDVCALASLDPVRLYAGLGYMPIRKNHVAAIV 1949 MARGPNKVLLVPYLVDYVLPFLIGLVKHKDVCALASLDPVRLYAGLGYMPIRKNHVAAIV Sbjct: 1 MARGPNKVLLVPYLVDYVLPFLIGLVKHKDVCALASLDPVRLYAGLGYMPIRKNHVAAIV 60 Query: 1950 DYVCSSNVALSSNQTKLQLAFIQHFLSAELLQLTEEEKNKILEFVVSNLYNEQFVEVRVR 2009 DYVCSSNVALSSNQTKLQLAFIQHFLSAELLQLTEEEKNKILEFVVSNLYNEQFVEVRVR Sbjct: 61 DYVCSSNVALSSNQTKLQLAFIQHFLSAELLQLTEEEKNKILEFVVSNLYNEQFVEVRVR 120 Query: 2010 AASILSDIVHNWKEEQPLLSLIERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAII 2069 AASILSDIVHNWKEEQPLLSLIERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAII Sbjct: 121 AASILSDIVHNWKEEQPLLSLIERFAKGLDVNKYTSKERQKLSKTDIKIHGNVLGLGAII 180 Query: 2070 SAFPYVFPLPPWIPKQLSNLSSWARTSGMTGQAAKNTISEFKKVRADTWKFDRASFNTEE 2129 SAFPYVFPLPPWIPKQLSNLSSWARTSGMTGQAAKNTISEFKKVRADTWKFDRASFNTEE Sbjct: 181 SAFPYVFPLPPWIPKQLSNLSSWARTSGMTGQAAKNTISEFKKVRADTWKFDRASFNTEE 240 Query: 2130 LEDLEGVLWRSYYA 2143 LEDLEGVLWRSYYA Sbjct: 241 LEDLEGVLWRSYYA 254 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.321 0.137 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,343,942 Number of Sequences: 6497 Number of extensions: 628792 Number of successful extensions: 2095 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2091 Number of HSP's gapped (non-prelim): 2 length of query: 2143 length of database: 2,996,526 effective HSP length: 106 effective length of query: 2037 effective length of database: 2,307,844 effective search space: 4701078228 effective search space used: 4701078228 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 331 (132.1 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL045W Annotated|07:414106:415734| frame 1; YGL045W/RIM8; Verified; this gene contains 1 exon (542 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL046W YGL046W SGDID:S0003014, Chr VII from 414100-414888 516 e-147 YGL045W YGL045W SGDID:S0003013, Chr VII from 415036-415725 457 e-129 >YGL046W YGL046W SGDID:S0003014, Chr VII from 414100-414888 Length = 262 Score = 516 bits (1328), Expect = e-147 Identities = 261/261 (100%), Positives = 261/261 (100%) Query: 1 MSLLRLWNKESRAPSKIKSHGIVGSYGNSMLAHNNVKQFRIDIDEPHRVWKPNESITGEA 60 MSLLRLWNKESRAPSKIKSHGIVGSYGNSMLAHNNVKQFRIDIDEPHRVWKPNESITGEA Sbjct: 1 MSLLRLWNKESRAPSKIKSHGIVGSYGNSMLAHNNVKQFRIDIDEPHRVWKPNESITGEA 60 Query: 61 VIDIKRDITNVAIKLSLVCEVRVKTGNSPTSKNKRIEKTLEKSTFLYGQDYVKTAFSAKE 120 VIDIKRDITNVAIKLSLVCEVRVKTGNSPTSKNKRIEKTLEKSTFLYGQDYVKTAFSAKE Sbjct: 61 VIDIKRDITNVAIKLSLVCEVRVKTGNSPTSKNKRIEKTLEKSTFLYGQDYVKTAFSAKE 120 Query: 121 KKPHVDKTTILNGLSKGEHRFPFRIRIPRGRGMLSSIKFERGSITYFLSCTLESLNNING 180 KKPHVDKTTILNGLSKGEHRFPFRIRIPRGRGMLSSIKFERGSITYFLSCTLESLNNING Sbjct: 121 KKPHVDKTTILNGLSKGEHRFPFRIRIPRGRGMLSSIKFERGSITYFLSCTLESLNNING 180 Query: 181 LKKPEARCEREFAVIVPLDVSRLPKPKTKTVVLQSASMVQNKKNKSTEDESSSYTQLTQK 240 LKKPEARCEREFAVIVPLDVSRLPKPKTKTVVLQSASMVQNKKNKSTEDESSSYTQLTQK Sbjct: 181 LKKPEARCEREFAVIVPLDVSRLPKPKTKTVVLQSASMVQNKKNKSTEDESSSYTQLTQK 240 Query: 241 STTSNSSSSSVNSKTSPLPNK 261 STTSNSSSSSVNSKTSPLPNK Sbjct: 241 STTSNSSSSSVNSKTSPLPNK 261 >YGL045W YGL045W SGDID:S0003013, Chr VII from 415036-415725 Length = 229 Score = 457 bits (1176), Expect = e-129 Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 315 DPMETFRKDICQSISPIYINPETLQFQSRVYLKVPLDAFSTLTTVGKFFSFQYYIEVMVN 374 DPMETFRKDICQSISPIYINPETLQFQSRVYLKVPLDAFSTLTTVGKFFSFQYYIEVMVN Sbjct: 2 DPMETFRKDICQSISPIYINPETLQFQSRVYLKVPLDAFSTLTTVGKFFSFQYYIEVMVN 61 Query: 375 LSKKNVVYTESNRIIGTPIGEQNGLGVENNINRIQRKMLRMVNPETLENDSEGYESSIFF 434 LSKKNVVYTESNRIIGTPIGEQNGLGVENNINRIQRKMLRMVNPETLENDSEGYESSIFF Sbjct: 62 LSKKNVVYTESNRIIGTPIGEQNGLGVENNINRIQRKMLRMVNPETLENDSEGYESSIFF 121 Query: 435 KDMVNVEKLKRLRNVTGMSIETVIGTTRSEQQQSDASIPSQSSITAPQNSPSNLRDWLAP 494 KDMVNVEKLKRLRNVTGMSIETVIGTTRSEQQQSDASIPSQSSITAPQNSPSNLRDWLAP Sbjct: 122 KDMVNVEKLKRLRNVTGMSIETVIGTTRSEQQQSDASIPSQSSITAPQNSPSNLRDWLAP 181 Query: 495 LNAYDSDDVPVPKYSPNDKVSVPSEDKQELEQKRLQQLESDPPPCDDY 542 LNAYDSDDVPVPKYSPNDKVSVPSEDKQELEQKRLQQLESDPPPCDDY Sbjct: 182 LNAYDSDDVPVPKYSPNDKVSVPSEDKQELEQKRLQQLESDPPPCDDY 229 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.313 0.131 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,408,065 Number of Sequences: 6497 Number of extensions: 159911 Number of successful extensions: 1164 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1162 Number of HSP's gapped (non-prelim): 2 length of query: 542 length of database: 2,996,526 effective HSP length: 95 effective length of query: 447 effective length of database: 2,379,311 effective search space: 1063552017 effective search space used: 1063552017 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 325 (129.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGR006W Annotated|07:506074:506829| frame 1; YGR006W/PRP18; Verified; this gene contains 1 exon (251 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGR006W PRP18 SGDID:S0003238, Chr VII from 506065-506724 394 e-111 >YGR006W PRP18 SGDID:S0003238, Chr VII from 506065-506724 Length = 219 Score = 394 bits (1012), Expect = e-111 Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MDLDLASILKGEISKKKKELANSKGVQPPCTEKFQPHESANIDETPRQVEQESTDEENLS 60 MDLDLASILKGEISKKKKELANSKGVQPPCTEKFQPHESANIDETPRQVEQESTDEENLS Sbjct: 1 MDLDLASILKGEISKKKKELANSKGVQPPCTEKFQPHESANIDETPRQVEQESTDEENLS 60 Query: 61 DNQSDDIRTTISKLENRPERIQEAIAQDKTISVIIDPSQIGSTEGKPLLSMKCNLYIHEI 120 DNQSDDIRTTISKLENRPERIQEAIAQDKTISVIIDPSQIGSTEGKPLLSMKCNLYIHEI Sbjct: 61 DNQSDDIRTTISKLENRPERIQEAIAQDKTISVIIDPSQIGSTEGKPLLSMKCNLYIHEI 120 Query: 121 LSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAV 180 LSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAV Sbjct: 121 LSRWKASLEAYHPELFLDTKKALFPLLLQLRRNQLAPDLLISLATVLYHLQQPKEINLAV 180 Query: 181 QSYMKLSIGNVAWPIGVTSV 200 QSYMKLSIGNVAWPIGVTSV Sbjct: 181 QSYMKLSIGNVAWPIGVTSV 200 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.131 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,426,990 Number of Sequences: 6497 Number of extensions: 59461 Number of successful extensions: 316 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 315 Number of HSP's gapped (non-prelim): 1 length of query: 251 length of database: 2,996,526 effective HSP length: 88 effective length of query: 163 effective length of database: 2,424,790 effective search space: 395240770 effective search space used: 395240770 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL211W Annotated|07:92516:93595| frame 2; YGL211W/NCS6; Uncharacterized; this gene contains 1 exon (359 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL211W YGL211W SGDID:S0003179, Chr VII from 92515-93096 353 2e-98 >YGL211W YGL211W SGDID:S0003179, Chr VII from 92515-93096 Length = 193 Score = 353 bits (907), Expect = 2e-98 Identities = 174/174 (100%), Positives = 174/174 (100%) Query: 1 MSFTAPSDPVNKPTKVKVSQLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVA 60 MSFTAPSDPVNKPTKVKVSQLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVA Sbjct: 1 MSFTAPSDPVNKPTKVKVSQLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVA 60 Query: 61 NNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATV 120 NNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATV Sbjct: 61 NNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATV 120 Query: 121 KRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAK 174 KRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAK Sbjct: 121 KRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAK 174 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.320 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,022,486 Number of Sequences: 6497 Number of extensions: 82910 Number of successful extensions: 223 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 222 Number of HSP's gapped (non-prelim): 1 length of query: 359 length of database: 2,996,526 effective HSP length: 92 effective length of query: 267 effective length of database: 2,398,802 effective search space: 640480134 effective search space used: 640480134 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 323 (129.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL198W Annotated|07:123596:124303| frame 2; YGL198W/YIP4; Verified; this gene contains 1 exon (235 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL198W YGL198W SGDID:S0003166, Chr VII from 123594-124379 439 e-124 >YGL198W YGL198W SGDID:S0003166, Chr VII from 123594-124379 Length = 261 Score = 439 bits (1129), Expect = e-124 Identities = 223/229 (97%), Positives = 223/229 (97%) Query: 1 MSYGREDTTIEPDFIEPDAPLAASGGVADNIGGTMQNSGSRGTLDETVLQTLKRDVVEIN 60 MSYGREDTTIEPDFIEPDAPLAASGGVADNIGGTMQNSGSRGTLDETVLQTLKRDVVEIN Sbjct: 1 MSYGREDTTIEPDFIEPDAPLAASGGVADNIGGTMQNSGSRGTLDETVLQTLKRDVVEIN 60 Query: 61 SRLKQVVYPHFPSFFSPSDDGIGAADNDISANCDLWAPLAFIILYSLFVSHARSLFSSLF 120 SRLKQVVYPHFPSFFSPSDDGIGAADNDISANCDLWAPLAFIILYSLFVSHARSLFSSLF Sbjct: 61 SRLKQVVYPHFPSFFSPSDDGIGAADNDISANCDLWAPLAFIILYSLFVSHARSLFSSLF 120 Query: 121 VSSWFILLVMALHLRLTKPHQRVSLISYISISGYCLFPQVLNALVSQILLPLAYHIGKQN 180 VSSWFILLVMALHLRLTKPHQRVSLISYISISGYCLFPQVLNALVSQILLPLAYHIGKQN Sbjct: 121 VSSWFILLVMALHLRLTKPHQRVSLISYISISGYCLFPQVLNALVSQILLPLAYHIGKQN 180 Query: 181 RWIVRVLSLVKLVVMALCLMWSVAAVSWVTKSKTIIEIYPLALCLFGMA 229 RWIVRVLSLVKLVVMALCLMWSVAAVSWVTKSKTIIEIY FGMA Sbjct: 181 RWIVRVLSLVKLVVMALCLMWSVAAVSWVTKSKTIIEIYLWHSVFFGMA 229 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.325 0.138 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,306,737 Number of Sequences: 6497 Number of extensions: 49455 Number of successful extensions: 163 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161 Number of HSP's gapped (non-prelim): 1 length of query: 235 length of database: 2,996,526 effective HSP length: 87 effective length of query: 148 effective length of database: 2,431,287 effective search space: 359830476 effective search space used: 359830476 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL059W Annotated|07:392228:393703| frame 2; YGL059W; Uncharacterized; this gene contains 1 exon (491 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL059W YGL059W SGDID:S0003027, Chr VII from 392223-393560 881 0.0 >YGL059W YGL059W SGDID:S0003027, Chr VII from 392223-393560 Length = 445 Score = 881 bits (2277), Expect = 0.0 Identities = 437/445 (98%), Positives = 438/445 (98%) Query: 1 MSKYQINCIRYRHFLRTSNISQIPDFTKYCIGPVNEELAPYIMETMKAYPSNSEYINPQH 60 MSKYQINCIRYRHFLRTSNISQIPDFTKYCIGPVNEELAPYIMETMKAYPSNSEYINPQH Sbjct: 1 MSKYQINCIRYRHFLRTSNISQIPDFTKYCIGPVNEELAPYIMETMKAYPSNSEYINPQH 60 Query: 61 YYHNRTVLVENYLKRSPNPVSLTQLAQYYDDSTKLTRTKIINSGKFVKEELVIRIAHKLN 120 YYHNRTVLVENYLKRSPNPVSLTQLAQYYDDSTKLTRTKIINSGKFVKEELVIRIAHKLN Sbjct: 61 YYHNRTVLVENYLKRSPNPVSLTQLAQYYDDSTKLTRTKIINSGKFVKEELVIRIAHKLN 120 Query: 121 QLQQLPFNVVNNFHFVQVYESYYNIFESFRKYPTIRTLEDASQFADFIKNMLEGFNTLNL 180 QLQQLPFNVVNNFHFVQVYESYYNIFESFRKYPTIRTLEDASQFADFIKNMLEGFNTLNL Sbjct: 121 QLQQLPFNVVNNFHFVQVYESYYNIFESFRKYPTIRTLEDASQFADFIKNMLEGFNTLNL 180 Query: 181 PHLIMGALECTILDLYPREKMDQLLSDLLRARISRRLIVEEHVVYTANYTSGKEENTLVL 240 PHLIMGALECTILDLYPREKMDQLLSDLLRARISRRLIVEEHVVYTANYTSGKEENTLVL Sbjct: 181 PHLIMGALECTILDLYPREKMDQLLSDLLRARISRRLIVEEHVVYTANYTSGKEENTLVL 240 Query: 241 GDIFQECSAKKYLLEASEESQKFIQDMYFKDIPMPEFIIEGDTQLSFYFLPTHLKYLLGE 300 GDIFQECSAKKYLLEASEESQKFIQDMYFKDIPMPEFIIEGDTQLSFYFLPTHLKYLLGE Sbjct: 241 GDIFQECSAKKYLLEASEESQKFIQDMYFKDIPMPEFIIEGDTQLSFYFLPTHLKYLLGE 300 Query: 301 ILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGVLHDDENLWSFGKSK 360 ILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGVLHDDENLWSFGKSK Sbjct: 301 ILRNTYEATMKHYIRKGLEKPEPIIVTVVSNDESYLFRISDKAGGVLHDDENLWSFGKSK 360 Query: 361 ERAQESLNNFHKLPGLQTVSIYDEVHSHTKYNSKLKSLQSITLKPYMHTSLEPMSYPSII 420 ERAQESLNNFHKLPGLQTVSIYDEVHSHTKYNSKLKSLQSITLKPYMHTSLEPMSYPSII Sbjct: 361 ERAQESLNNFHKLPGLQTVSIYDEVHSHTKYNSKLKSLQSITLKPYMHTSLEPMSYPSII 420 Query: 421 NGHIKYETPLIELLKRSFRYKLGIG 445 NGHIKYETPLIELL LG+G Sbjct: 421 NGHIKYETPLIELLSGLLDTSLGLG 445 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.320 0.137 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,188,646 Number of Sequences: 6497 Number of extensions: 150152 Number of successful extensions: 457 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 456 Number of HSP's gapped (non-prelim): 1 length of query: 491 length of database: 2,996,526 effective HSP length: 94 effective length of query: 397 effective length of database: 2,385,808 effective search space: 947165776 effective search space used: 947165776 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 325 (129.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL196W Annotated|07:129888:131174| frame 3; YGL196W; Uncharacterized; this gene contains 1 exon (428 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL196W YGL196W SGDID:S0003164, Chr VII from 130553-131050 331 1e-91 >YGL196W YGL196W SGDID:S0003164, Chr VII from 130553-131050 Length = 165 Score = 331 bits (849), Expect = 1e-91 Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 223 MEEVKAVNSAAKVLCSVDPQFDPSKLTLSVGATPTSNSLKLDNKSTLVKFITTQLVSTLE 282 MEEVKAVNSAAKVLCSVDPQFDPSKLTLSVGATPTSNSLKLDNKSTLVKFITTQLVSTLE Sbjct: 1 MEEVKAVNSAAKVLCSVDPQFDPSKLTLSVGATPTSNSLKLDNKSTLVKFITTQLVSTLE 60 Query: 283 IHCGNYCMYDLQQVATGCVQDHELSGFVLGTVLSSYPSRGELLSNTGVMCLTREASSIKG 342 IHCGNYCMYDLQQVATGCVQDHELSGFVLGTVLSSYPSRGELLSNTGVMCLTREASSIKG Sbjct: 61 IHCGNYCMYDLQQVATGCVQDHELSGFVLGTVLSSYPSRGELLSNTGVMCLTREASSIKG 120 Query: 343 FGICADLEHVLKSESFSREWYVARVSQEHGILRPIRNWNETTPL 386 FGICADLEHVLKSESFSREWYVARVSQEHGILRPIRNWNETTPL Sbjct: 121 FGICADLEHVLKSESFSREWYVARVSQEHGILRPIRNWNETTPL 164 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.318 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,568,605 Number of Sequences: 6497 Number of extensions: 109590 Number of successful extensions: 342 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 341 Number of HSP's gapped (non-prelim): 1 length of query: 428 length of database: 2,996,526 effective HSP length: 93 effective length of query: 335 effective length of database: 2,392,305 effective search space: 801422175 effective search space used: 801422175 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL125W Annotated|07:272526:274328| frame 3; YGL125W/MET13; Verified; this gene contains 1 exon (600 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL125W MET13 SGDID:S0003093, Chr VII from 272524-274323 1226 0.0 YPL023C MET12 SGDID:S0005944, Chr XVI from 504335-506308, revers... 236 8e-63 >YGL125W MET13 SGDID:S0003093, Chr VII from 272524-274323 Length = 599 Score = 1226 bits (3171), Expect = 0.0 Identities = 591/600 (98%), Positives = 594/600 (99%), Gaps = 1/600 (0%) Query: 1 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGG 60 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGG Sbjct: 1 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGG 60 Query: 61 RLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRD 120 RLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRD Sbjct: 61 RLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRD 120 Query: 121 AENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPELPNKDVKLDLEYLKQKID 180 AENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPELPNKDVKLDLEYL ++ Sbjct: 121 AENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPELPNKDVKLDLEYLSRR-S 179 Query: 181 AGGDFIITQMFYDVDNFINWCSQVRAAGMDVPIIPGIMPITTYAAFLRRAQWGQISIPQH 240 GGDFIITQMFYDVDN +NWCSQVRAAGMDVPIIPGIMPITTYAAFLRR QWGQISIPQH Sbjct: 180 TGGDFIITQMFYDVDNLLNWCSQVRAAGMDVPIIPGIMPITTYAAFLRRIQWGQISIPQH 239 Query: 241 FSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLEKAPLMILERLNIL 300 FSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLEKAPLMILERLNIL Sbjct: 240 FSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLEKAPLMILERLNIL 299 Query: 301 PTESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQWAVDEFPNGRFGD 360 PTESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQWAVDEFPNGRFGD Sbjct: 300 PTESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQWAVDEFPNGRFGD 359 Query: 361 SSSPAFGDLDLCGSDLIRQSANKCLELWSTPTSINDVAFLVINYLNGNLKCLPWSDIPIN 420 SSSPAFGDLDLCGSDLIRQSANKCLELWSTPTSINDVAFLVINYLNGNLKCLPWSDIPIN Sbjct: 360 SSSPAFGDLDLCGSDLIRQSANKCLELWSTPTSINDVAFLVINYLNGNLKCLPWSDIPIN 419 Query: 421 DEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGYVYQKQYLEFMLPKTK 480 DEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGYVYQKQYLEFMLPKTK Sbjct: 420 DEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGYVYQKQYLEFMLPKTK 479 Query: 481 LPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPGREILQPTIVEKISFL 540 LPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPGREILQPTIVEKISFL Sbjct: 480 LPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPGREILQPTIVEKISFL 539 Query: 541 AWKEEFYHILNEWKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDNDYISPDDQIHSILLSL 600 AWKEEFYHILNEWKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDNDYISPDDQIHSILLSL Sbjct: 540 AWKEEFYHILNEWKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDNDYISPDDQIHSILLSL 599 >YPL023C MET12 SGDID:S0005944, Chr XVI from 504335-506308, reverse complement Length = 657 Score = 236 bits (602), Expect = 8e-63 Identities = 133/295 (45%), Positives = 178/295 (60%), Gaps = 14/295 (4%) Query: 17 PTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGGRLSHLSTDLVATAQSV 76 P S E+F PKT G +NL +RM RM A P FI +TW AGG T L + AQ Sbjct: 13 PFISLEFFPPKTELGTRNLMERMHRM-TALDPLFITVTWGAGGTTAEKTLT-LASLAQQT 70 Query: 77 LGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRDAENWTPV---EGGFQY 133 L + CMHLTCTN ++IDDAL+ Y++G +NILALRGDPP E+W E F+Y Sbjct: 71 LNIPVCMHLTCTNTEKAIIDDALDRCYNAGIRNILALRGDPP-IGEDWLDSQSNESPFKY 129 Query: 134 AKDLIKYIKSKYGDHFAIGVAGYPECH----PELPNKDVKLDLEYLKQKIDAGGDFIITQ 189 A DL++YIK YGD F +GVA YPE H E +D DL YLK+K++AG DF+ITQ Sbjct: 130 AVDLVRYIKQSYGDKFCVGVAAYPEGHCEGEAEGHEQDPLKDLVYLKEKVEAGADFVITQ 189 Query: 190 MFYDVDNFINWCSQVR-AAGMDVPIIPGIMPITTYAAFLRRAQWGQISIPQHFSSRLDP- 247 +FYDV+ F+ + R D+P+ PG+MPI +Y F R A+ SIP SR P Sbjct: 190 LFYDVEKFLTFEMLFRERISQDLPLFPGLMPINSYLLFHRAAKLSHASIPPAILSRFPPE 249 Query: 248 IKDDDELVRDIGTNLIVEMCQKLLD--SGYVSHLHIYTMNLEKAPLMILERLNIL 300 I+ DD V+ IG ++++E+ Q++ SG + H YT+NLEKA I+ + +L Sbjct: 250 IQSDDNAVKSIGVDILIELIQEIYQRTSGRIKGFHFYTLNLEKAIAQIVSQSPVL 304 Score = 184 bits (466), Expect = 5e-47 Identities = 102/255 (40%), Positives = 149/255 (58%), Gaps = 13/255 (5%) Query: 342 VARTSQWAVDEFPNGRFGDSSSPAFGDLDLCGSDLIRQSANKCLELWSTPTSINDVAFLV 401 + R + W DEFPNGRFGDS SPA+G++D G I+ S +K LELW P +I D+ + Sbjct: 402 LGRDATW--DEFPNGRFGDSRSPAYGEIDGYGPS-IKVSKSKALELWGIPKTIGDLKDIF 458 Query: 402 INYLNGNLKCLPWSDIPINDEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGP 461 I YL G+ +PWSD+ ++ E I+ LI+LN +T+ SQP N S+DKI GWGP Sbjct: 459 IKYLEGSTDAIPWSDLGLSAETALIQEELIQLNYRGYLTLASQPATNATLSSDKIFGWGP 518 Query: 462 KDGYVYQKQYLEFMLPK----TKLPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNA 517 G +YQK ++E + + T L +D +F +Y+A DS G +N D S+ Sbjct: 519 AKGRLYQKAFVEMFIHRQQWETTLKPKLDHYGRRKF-SYYAGDSSGSFETN-LDPHSSSV 576 Query: 518 VTWGIFPGREILQPTIVEKISFLAWKEEFYHILNEWKLNMNKYDKPHSAQFIQSLI-DDY 576 VTWG+FP + Q TI+E+ SF AW++E + I +EW + + A + L+ DY Sbjct: 577 VTWGVFPNSPVKQTTIIEEESFKAWRDEAFSIWSEW---AKLFPRNTPANILLRLVHKDY 633 Query: 577 CLVNIVDNDYISPDD 591 CLV+IV +D+ D+ Sbjct: 634 CLVSIVHHDFKETDE 648 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.320 0.138 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,038,345 Number of Sequences: 6497 Number of extensions: 196554 Number of successful extensions: 470 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 458 Number of HSP's gapped (non-prelim): 3 length of query: 600 length of database: 2,996,526 effective HSP length: 96 effective length of query: 504 effective length of database: 2,372,814 effective search space: 1195898256 effective search space used: 1195898256 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL201C Annotated|07:120911:117858| frame 4; YGL201C/MCM6; Verified; this gene contains 1 exon (1017 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL201C MCM6 SGDID:S0003169, Chr VII from 117856-120909, reverse... 2001 0.0 YPR019W CDC54 SGDID:S0006223, Chr XVI from 596745-599546 333 6e-92 YBL023C MCM2 SGDID:S0000119, Chr II from 174882-177488, reverse ... 295 3e-80 YLR274W CDC46 SGDID:S0004264, Chr XII from 691555-693882 293 1e-79 YBR202W CDC47 SGDID:S0000406, Chr II from 625730-628267 290 6e-79 YEL032W MCM3 SGDID:S0000758, Chr V from 86937-89852 248 5e-66 >YGL201C MCM6 SGDID:S0003169, Chr VII from 117856-120909, reverse complement Length = 1017 Score = 2001 bits (5184), Expect = 0.0 Identities = 1016/1017 (99%), Positives = 1016/1017 (99%) Query: 1 MSSPFPADTPSSNRPSNSSPPPSSIGAGFGSSSGLDSQIGSRLHFPSSSQPHVSNSQTGP 60 MSSPFPADTPSSNRPSNSSPPPSSIGAGFGSSSGLDSQIGSRLHFPSSSQPHVSNSQTGP Sbjct: 1 MSSPFPADTPSSNRPSNSSPPPSSIGAGFGSSSGLDSQIGSRLHFPSSSQPHVSNSQTGP 60 Query: 61 FVNDSTQFSSQRLQTDGSATNDMEGNEPARSFKSRALNHVKKVDDVTGEKVREAFEQFLE 120 FVNDSTQFSSQRLQTDGSATNDMEGNEPARSFKSRALNHVKKVDDVTGEKVREAFEQFLE Sbjct: 61 FVNDSTQFSSQRLQTDGSATNDMEGNEPARSFKSRALNHVKKVDDVTGEKVREAFEQFLE 120 Query: 121 DFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMRENGALAMAISEQYYRFLPF 180 DFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMRENGALAMAISEQYYRFL F Sbjct: 121 DFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMRENGALAMAISEQYYRFLAF 180 Query: 181 LQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADEDEQQDDDMNGSSLPRDSGSSAAPGN 240 LQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADEDEQQDDDMNGSSLPRDSGSSAAPGN Sbjct: 181 LQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADEDEQQDDDMNGSSLPRDSGSSAAPGN 240 Query: 241 GTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEV 300 GTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEV Sbjct: 241 GTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEV 300 Query: 301 RPELYKASFTCDMCRAIVDNVEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVR 360 RPELYKASFTCDMCRAIVDNVEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVR Sbjct: 301 RPELYKASFTCDMCRAIVDNVEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVR 360 Query: 361 IQENANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSST 420 IQENANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSST Sbjct: 361 IQENANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSST 420 Query: 421 LDTRGISKTTEGLNSGVTGLRSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRET 480 LDTRGISKTTEGLNSGVTGLRSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRET Sbjct: 421 LDTRGISKTTEGLNSGVTGLRSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRET 480 Query: 481 ELQMAANLQANNVYQDNERDQEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGH 540 ELQMAANLQANNVYQDNERDQEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGH Sbjct: 481 ELQMAANLQANNVYQDNERDQEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGH 540 Query: 541 EAVKKGILLQMLGGVHKSTVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSG 600 EAVKKGILLQMLGGVHKSTVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSG Sbjct: 541 EAVKKGILLQMLGGVHKSTVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSG 600 Query: 601 KASSAAGLTAAVVRDEEGGDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQT 660 KASSAAGLTAAVVRDEEGGDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQT Sbjct: 601 KASSAAGLTAAVVRDEEGGDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQT 660 Query: 661 ISIAKAGIHATLNARTSILAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCN 720 ISIAKAGIHATLNARTSILAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCN Sbjct: 661 ISIAKAGIHATLNARTSILAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCN 720 Query: 721 EKIDTELASHIVDLHMKRDEAIEPPFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKEL 780 EKIDTELASHIVDLHMKRDEAIEPPFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKEL Sbjct: 721 EKIDTELASHIVDLHMKRDEAIEPPFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKEL 780 Query: 781 RKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSIIRVDV 840 RKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSIIRVDV Sbjct: 781 RKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSIIRVDV 840 Query: 841 DDVEMDEEFDNIESQSHAASGNNDDNDDGTGSGVITSEPPADIEEGQSEATARPGTSEKK 900 DDVEMDEEFDNIESQSHAASGNNDDNDDGTGSGVITSEPPADIEEGQSEATARPGTSEKK Sbjct: 841 DDVEMDEEFDNIESQSHAASGNNDDNDDGTGSGVITSEPPADIEEGQSEATARPGTSEKK 900 Query: 901 KTTVTYDKYVSMMNMIVRKIAEVDREGAEELTAVDIVDWYLLQKENDLGSLAEYWEERRL 960 KTTVTYDKYVSMMNMIVRKIAEVDREGAEELTAVDIVDWYLLQKENDLGSLAEYWEERRL Sbjct: 901 KTTVTYDKYVSMMNMIVRKIAEVDREGAEELTAVDIVDWYLLQKENDLGSLAEYWEERRL 960 Query: 961 AFKVIKRLVKDRILMEIHGTRHNLRDLENEENENNKTVYVIHPNCEVLDQLEPQDSS 1017 AFKVIKRLVKDRILMEIHGTRHNLRDLENEENENNKTVYVIHPNCEVLDQLEPQDSS Sbjct: 961 AFKVIKRLVKDRILMEIHGTRHNLRDLENEENENNKTVYVIHPNCEVLDQLEPQDSS 1017 >YPR019W CDC54 SGDID:S0006223, Chr XVI from 596745-599546 Length = 933 Score = 333 bits (855), Expect = 6e-92 Identities = 210/585 (35%), Positives = 315/585 (53%), Gaps = 60/585 (10%) Query: 261 RVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEVRPELYKASFTCDMCRAIVDN 320 + +++ +N+ + +R++ I L+++ G V R++ V P++ A F C++C + Sbjct: 299 KFYKVRPYNVGSCKGMRELNPNDIDKLINLKGLVLRSTPVIPDMKVAFFKCNVCDHTMAV 358 Query: 321 VEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVRIQENANEIPTGSMPRTLDVI 380 EP C C +L R F D Q +++QE + +P G P ++ + Sbjct: 359 EIDRGVIQEPARCERIDCNEPNSMSLIHNRCSFADKQVIKLQETPDFVPDGQTPHSISLC 418 Query: 381 LRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSSTLDTRGISKTTEGLNSGVTGL 440 + + V+ + GDR + TG +P NS L Sbjct: 419 VYDELVDSCRAGDRIEVTGTFRSIPIRA-------------------------NSRQRVL 453 Query: 441 RSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRETELQMAANLQANNVYQDNERD 500 +SL YK HV + D +++ E EL N NE + Sbjct: 454 KSL------YKTYVDVVHV----KKVSDKRLDVDTSTIEQELMQ-------NKVDHNEVE 496 Query: 501 QEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTV 560 + + ++ ++ +++E+ E +Y L RSIAP+++ E VKKGILLQ+ GG +K+ Sbjct: 497 E---VRQITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVKKGILLQLFGGTNKTFT 553 Query: 561 EGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGD 620 +G + RGDINI + GDPSTSKSQ L+YV PR VYTSGK SSA GLTA + RD + Sbjct: 554 KGGRYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDVDTKQ 613 Query: 621 YTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILA 680 +E+GAL+L+D G+CCIDEFDKM S + +HE MEQQTISIAKAGI TLNAR+SILA Sbjct: 614 LVLESGALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTLNARSSILA 673 Query: 681 AANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDL------ 734 +ANP+G RYN L + N+++ P++SRFDL +++LD +EK D ELA H+ +L Sbjct: 674 SANPIGSRYNPNLPVTENIDLPPPLLSRFDLVYLVLDKVDEKNDRELAKHLTNLYLEDKP 733 Query: 735 -HMKRDEAIEPPFSAEQLRRYIKYART-FKPILTKEARSYLVEKYKELRK--DDAQGFSR 790 H+ +D+ + F L YI YA+ PI+T+ A++ LV Y +RK DD++ Sbjct: 734 EHISQDDVLPVEF----LTMYISYAKEHIHPIITEAAKTELVRAYVGMRKMGDDSRS-DE 788 Query: 791 SSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSI 835 T RQLESMIRL+EA A+ + + + EA L+R +I Sbjct: 789 KRITATTRQLESMIRLAEAHAKMKLKNVVELEDVQEAVRLIRSAI 833 >YBL023C MCM2 SGDID:S0000119, Chr II from 174882-177488, reverse complement Length = 868 Score = 295 bits (755), Expect = 3e-80 Identities = 202/617 (32%), Positives = 310/617 (50%), Gaps = 118/617 (19%) Query: 269 NLPTVHRIRDIRSEKIGSLLSISGTVTRTSEVRPELYKASFTCDMCRAIVDNVEQ-SFKY 327 + PT++ +R++R + SL+ ++G VTR + V P+L F C C +I+ Q S + Sbjct: 299 DFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEE 358 Query: 328 TEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVRIQENANEIPTGSMPRTLDVILRGDSVE 387 +FC N C+++ + +N ++ + ++Q+V +QE +P G +PR +VIL D V+ Sbjct: 359 IRISFCTN--CKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVD 416 Query: 388 RAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSSTLDTRGISKTTEGLNSGVTGLRSLGVRD 447 +K P ++ GI K N Sbjct: 417 VSK--------------------------PGEEVEVTGIYKNNYDGNLNAKN-------- 442 Query: 448 LTYKISFLACHVISIGSNIGASSPDANSNNRETELQMAANLQANNVYQDNERDQEVFLNS 507 G + A+ +ANS R + N + E +VF S Sbjct: 443 ---------------GFPVFATIIEANSIKR----------REGNTANEGEEGLDVF--S 475 Query: 508 LSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEGIKLRG 567 + +E E +++ +D I DK++ S+AP+++GH +K + + GGV K+ +RG Sbjct: 476 WTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRG 535 Query: 568 DINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGDYTIEAGA 627 DIN+ ++GDP T+KSQ LKYV A R+V+ +G+ +SA GLTA+V +D ++T+E GA Sbjct: 536 DINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGA 595 Query: 628 LMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANPVGG 687 L+LAD G+C IDEFDKM+ D+ +IHEAMEQQ+ISI+KAGI TL AR SI+AAANP GG Sbjct: 596 LVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGG 655 Query: 688 RYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHMKR--------- 738 RYN L L N+++T PI+SRFD+ V+ D +E+ D LA+ +VD H++ Sbjct: 656 RYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSHPENDEDRE 715 Query: 739 --------DEAIE---------------------------PPFSAEQLRRYIKYART-FK 762 + AIE P E L +YI YART Sbjct: 716 GEELKNNGESAIEQGEDEINEQLNARQRRLQRQRKKEEEISPIPQELLMKYIHYARTKIY 775 Query: 763 PILTKEARSYLVEKYKELRKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPS 822 P L + + Y +LR+ + S S+ ITVR LES++R++E+ A+ S Sbjct: 776 PKLHQMDMDKVSRVYADLRR---ESISTGSFPITVRHLESILRIAESFAKMRL------S 826 Query: 823 FIAEAYDLLRQSIIRVD 839 +YDL R + VD Sbjct: 827 EFVSSYDLDRAIKVVVD 843 >YLR274W CDC46 SGDID:S0004264, Chr XII from 691555-693882 Length = 775 Score = 293 bits (749), Expect = 1e-79 Identities = 227/778 (29%), Positives = 367/778 (47%), Gaps = 145/778 (18%) Query: 104 DDVTGEKVREAFEQFLEDFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMREN 163 +D ++ ++F+ F+ +F + S + +YR Q+ + ++ ++ +HL + N Sbjct: 20 NDDDNTEIIKSFKNFILEFRLDS------QFIYRDQLRNNILVKNYSLTVNMEHL-IGYN 72 Query: 164 GALAMAISEQYYRFLPFLQKGLRRVVRKYAPELLNTSDSLKRSEGDEGQADEDEQQDDDM 223 + +S++ +P + + +V ++ + +L+ + S ++ D Sbjct: 73 EDIYKKLSDEPSDIIPLFETAITQVAKRIS--ILSRAQSANNNDKD-------------- 116 Query: 224 NGSSLPRDSGSSAAPGNGTSAMATRSITTSTSPEQTERVFQISFFNLPTVHRIRDIRSEK 283 P N ++M T S+ ++ P FQ+ + +RD+ SE Sbjct: 117 --------------PEN--TSMDTDSLLLNSLP-----TFQLILNSNANQIPLRDLDSEH 155 Query: 284 IGSLLSISGTVTRTSEVRPELYKASFTCDMCRAIVDNVEQSFK-YTEPTFCPNPSC---- 338 + ++ +SG + TS + S C CR +F T T SC Sbjct: 156 VSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFNSITGNTVSLPRSCLSTI 215 Query: 339 --ENRAFWTLNV------------------TRSRFLDWQKVRIQENANEIPTGSMPRTLD 378 E+ N+ S+F+D Q +++QE +P G MPR L Sbjct: 216 ESESSMANESNIGDESTKKNCGPDPYIIIHESSKFIDQQFLKLQEIPELVPVGEMPRNLT 275 Query: 379 VILRGDSVERAKPGDRCKFTGVEIVVPDVTQLGLPGVKPSSTLDTRGISKTTEGLNSGVT 438 + + PG R G+ + G G + G Sbjct: 276 MTCDRYLTNKVIPGTRVTIVGIYSIYNSKNGAG-------------------SGRSGGGN 316 Query: 439 GLRSLGVRDLTYKISFLACHVISIGSNIGASSPDANSNNRETELQMAANLQANNVYQDNE 498 G + +R KI + I S++ SS N+V E Sbjct: 317 GGSGVAIRTPYIKI-------LGIQSDVETSSI------------------WNSVTMFTE 351 Query: 499 RDQEVFLNSLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKS 558 ++E FL ++ ++ +Y+ L SIAP++FG+E +KK I+ ++GG K Sbjct: 352 EEEEEFL------------QLSRNPKLYEILTNSIAPSIFGNEDIKKAIVCLLMGGSKKI 399 Query: 559 TVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEG 618 +G++LRGDIN+ ++GDP T+KSQ LK+V +P +VYTSGK SSAAGLTA+V RD Sbjct: 400 LPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQRDPMT 459 Query: 619 GDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSI 678 ++ +E GA++LAD G+ CIDEFDKM D+VAIHEAMEQQTISIAKAGI LN+RTS+ Sbjct: 460 REFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTVLNSRTSV 519 Query: 679 LAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHMKR 738 LAAANP+ GRY+ S N++ I+SRFD+ F++ DD NE+ D +A+H++++H Sbjct: 520 LAAANPIYGRYDDLKSPGDNIDFQTTILSRFDMIFIVKDDHNEERDISIANHVINIHTGN 579 Query: 739 DEAIE-------PPFSAEQLRRYIKYAR-TFKPILTKEARSYLVEKYKELRK----DDAQ 786 A++ S E+++RYI Y R P L+ +A L + +RK ++ + Sbjct: 580 ANAMQNQQEENGSEISIEKMKRYITYCRLKCAPRLSPQAAEKLSSNFVTIRKQLLINELE 639 Query: 787 GFSRSSYRITVRQLESMIRLSEAIARANC--------VDEITPSFIAEAYDLLRQSII 836 RSS IT+RQLE++IR++E++A+ VDE F A D Q I Sbjct: 640 STERSSIPITIRQLEAIIRITESLAKLELSPIAQERHVDEAIRLFQASTMDAASQDPI 697 >YBR202W CDC47 SGDID:S0000406, Chr II from 625730-628267 Length = 845 Score = 290 bits (743), Expect = 6e-79 Identities = 154/332 (46%), Positives = 223/332 (67%), Gaps = 4/332 (1%) Query: 507 SLSSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEGIKLR 566 SL+SD + E++ +Y++L +SIAP ++G+ VKK +LL ++GGV K +G+K+R Sbjct: 392 SLTSDVEERVMELITSGDVYNRLAKSIAPEIYGNLDVKKALLLLLVGGVDKRVGDGMKIR 451 Query: 567 GDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGDYTIEAG 626 GDIN+C++GDP +KSQ LK + +PR VYT+GK SS GLTAAV++D + +E G Sbjct: 452 GDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDEMILEGG 511 Query: 627 ALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANPVG 686 AL+LADNGICCIDEFDKMD SD+ AIHE MEQQTISI+KA I+ ARTSILAAANP+ Sbjct: 512 ALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAVINTNPGARTSILAAANPLY 571 Query: 687 GRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHI--VDLHMKRDEAIEP 744 GR N +LS N+N+ A ++SRFD+ F++LD + D +LA H+ V +H K+ + Sbjct: 572 GRINPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEKLAEHVTYVHMHNKQPDLDFT 631 Query: 745 PFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKELRKDDAQGF-SRSSY-RITVRQLES 802 P ++R YI YA+T +P++++ Y+V+ Y LR+D + S+ S+ + T R L Sbjct: 632 PVEPSKMREYIAYAKTKRPVMSEAVNDYVVQAYIRLRQDSKREMDSKFSFGQATPRTLLG 691 Query: 803 MIRLSEAIARANCVDEITPSFIAEAYDLLRQS 834 +IRLS+A+A+ D + + EA L+R S Sbjct: 692 IIRLSQALAKLRLADMVDIDDVEEALRLVRVS 723 >YEL032W MCM3 SGDID:S0000758, Chr V from 86937-89852 Length = 971 Score = 248 bits (632), Expect = 5e-66 Identities = 127/279 (45%), Positives = 184/279 (65%), Gaps = 3/279 (1%) Query: 458 HVISIGSNIGASSPDANSNNRETELQMAANLQANNVYQDNERDQEVFLNSLSSD-EINEL 516 +V+ + ++GA N +N T + + N VY + R V + +D +I + Sbjct: 293 NVVGVFKSLGAGG--MNQSNSNTLIGFKTLILGNTVYPLHARSTGVAARQMLTDFDIRNI 350 Query: 517 KEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEGIKLRGDINICVVGD 576 ++ K + I+D L +S+AP+++GH+ +KK ILL ++GGV K+ G LRGDINI +VGD Sbjct: 351 NKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGD 410 Query: 577 PSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGDYTIEAGALMLADNGIC 636 PST+KSQ L++V+ A ++ T+G+ SS GLTAAV D E G+ +EAGA++LAD G+ Sbjct: 411 PSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVV 470 Query: 637 CIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANPVGGRYNRKLSLR 696 CIDEFDKM D+VAIHE MEQQT++IAKAGIH TLNAR S++AAANPV G+Y+ Sbjct: 471 CIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPH 530 Query: 697 GNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLH 735 N+ + ++SRFDL FV+ DD NE D ++ H++ H Sbjct: 531 QNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTH 569 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.131 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,052,163 Number of Sequences: 6497 Number of extensions: 277467 Number of successful extensions: 1652 Number of sequences better than 1.0e-30: 6 Number of HSP's better than 0.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1625 Number of HSP's gapped (non-prelim): 17 length of query: 1017 length of database: 2,996,526 effective HSP length: 100 effective length of query: 917 effective length of database: 2,346,826 effective search space: 2152039442 effective search space used: 2152039442 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGL236C Annotated|07:55796:53787| frame 4; YGL236C/MTO1; Verified; this gene contains 1 exon (669 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGL236C MTO1 SGDID:S0003205, Chr VII from 53756-55795, reverse c... 1314 0.0 >YGL236C MTO1 SGDID:S0003205, Chr VII from 53756-55795, reverse complement Length = 679 Score = 1314 bits (3400), Expect = 0.0 Identities = 662/662 (100%), Positives = 662/662 (100%) Query: 1 MLRVTTLASSCTSFPLQVLRRRLTISSLTSFQPTTKTQVVVIGAGHAGCEAAAASSRTGA 60 MLRVTTLASSCTSFPLQVLRRRLTISSLTSFQPTTKTQVVVIGAGHAGCEAAAASSRTGA Sbjct: 1 MLRVTTLASSCTSFPLQVLRRRLTISSLTSFQPTTKTQVVVIGAGHAGCEAAAASSRTGA 60 Query: 61 HTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDGLMGKVTDLAGVQFKMLNRSKGP 120 HTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDGLMGKVTDLAGVQFKMLNRSKGP Sbjct: 61 HTTLITPSLTDIGKCSCNPSIGGVGKGILVKEIDALDGLMGKVTDLAGVQFKMLNRSKGP 120 Query: 121 AVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKVADLILYDPGCGHKVIKGVVLDD 180 AVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKVADLILYDPGCGHKVIKGVVLDD Sbjct: 121 AVWGPRAQIDRELYKKYMQRELSDKKAHPNLSLLQNKVADLILYDPGCGHKVIKGVVLDD 180 Query: 181 GTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPTYGISNTLQNEVGFQLGRLKTGT 240 GTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPTYGISNTLQNEVGFQLGRLKTGT Sbjct: 181 GTQVGADQVIITTGTFLSAEIHIGDKRIAAGRIGEQPTYGISNTLQNEVGFQLGRLKTGT 240 Query: 241 PARLAKESIDFSALEVQKGDALPVPMSFLNETVSVEPTKQLDCFGTHTTPQMHDFLRNNL 300 PARLAKESIDFSALEVQKGDALPVPMSFLNETVSVEPTKQLDCFGTHTTPQMHDFLRNNL Sbjct: 241 PARLAKESIDFSALEVQKGDALPVPMSFLNETVSVEPTKQLDCFGTHTTPQMHDFLRNNL 300 Query: 301 HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWLEPEGFNSDVIYPNGISNSMPEDV 360 HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWLEPEGFNSDVIYPNGISNSMPEDV Sbjct: 301 HQSIHIQDTTIKGPRYCPSIEAKILRFPDRSSHKIWLEPEGFNSDVIYPNGISNSMPEDV 360 Query: 361 QLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSLETKLVDGLFLAGQINGTTGYEEA 420 QLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSLETKLVDGLFLAGQINGTTGYEEA Sbjct: 361 QLQMMRLIPGMANVEILQPAYGVEYDYVDPRQLKPSLETKLVDGLFLAGQINGTTGYEEA 420 Query: 421 AAQGIIAGINAGLLSRQEREQLVLKRSEAYIGVLIDDLINNGVIEPYRMFTSRSEFRISV 480 AAQGIIAGINAGLLSRQEREQLVLKRSEAYIGVLIDDLINNGVIEPYRMFTSRSEFRISV Sbjct: 421 AAQGIIAGINAGLLSRQEREQLVLKRSEAYIGVLIDDLINNGVIEPYRMFTSRSEFRISV 480 Query: 481 RADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDETIRALQNFKLSSQKWSSLLQANIA 540 RADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDETIRALQNFKLSSQKWSSLLQANIA Sbjct: 481 RADNADFRLTPIGAQLGIISPVRLSQYSRDKHLYDETIRALQNFKLSSQKWSSLLQANIA 540 Query: 541 PQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQF 600 PQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQF Sbjct: 541 PQAENRSAWEIFRFKDMDLHKLYECIPDLPINLLDIPMHVVTKINIQGKYEPYIVKQNQF 600 Query: 601 VKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQPLTIGQARRIQGITAAALFELYRV 660 VKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQPLTIGQARRIQGITAAALFELYRV Sbjct: 601 VKAFQADENMLLPQDYDYRQLPTLSTECKLLLNRVQPLTIGQARRIQGITAAALFELYRV 660 Query: 661 AR 662 AR Sbjct: 661 AR 662 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.137 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,747,871 Number of Sequences: 6497 Number of extensions: 160208 Number of successful extensions: 413 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 412 Number of HSP's gapped (non-prelim): 1 length of query: 669 length of database: 2,996,526 effective HSP length: 97 effective length of query: 572 effective length of database: 2,366,317 effective search space: 1353533324 effective search space used: 1353533324 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YGR231C Annotated|07:953482:952550| frame 5; YGR231C/PHB2; Verified; this gene contains 1 exon (310 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YGR231C PHB2 SGDID:S0003463, Chr VII from 952526-953473, reverse... 598 e-172 YGR132C PHB1 SGDID:S0003364, Chr VII from 755584-756447, reverse... 281 1e-76 >YGR231C PHB2 SGDID:S0003463, Chr VII from 952526-953473, reverse complement Length = 315 Score = 598 bits (1543), Expect = e-172 Identities = 309/310 (99%), Positives = 310/310 (100%) Query: 1 MNRSPGEFQRYAKAFQKQLSKVQQTGGRGQVPSPRGAFAGLGGLLLLGGGALFINNALFN 60 MNRSPGEFQRYAKAFQKQLSKVQQTGGRGQVPSPRGAFAGLGGLLLLGGGALFINNALFN Sbjct: 1 MNRSPGEFQRYAKAFQKQLSKVQQTGGRGQVPSPRGAFAGLGGLLLLGGGALFINNALFN 60 Query: 61 VDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVN 120 VDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVN Sbjct: 61 VDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVN 120 Query: 121 ITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRL 180 ITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRL Sbjct: 121 ITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRL 180 Query: 181 IRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQG 240 IRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQG Sbjct: 181 IRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQG 240 Query: 241 MVVRAQGEAKSAELIGEAIKKSRDYVELKRLDTARDIAKILASSPNRVILDNEALLLNTV 300 MVVRAQGEAKSAELIGEAIKKSRDYVELKRLDTARDIAKILASSPNRVILDNEALLLNTV Sbjct: 241 MVVRAQGEAKSAELIGEAIKKSRDYVELKRLDTARDIAKILASSPNRVILDNEALLLNTV 300 Query: 301 VDARIDGRGK 310 VDARIDGRG+ Sbjct: 301 VDARIDGRGQ 310 >YGR132C PHB1 SGDID:S0003364, Chr VII from 755584-756447, reverse complement Length = 287 Score = 281 bits (718), Expect = 1e-76 Identities = 140/241 (58%), Positives = 191/241 (79%), Gaps = 1/241 (0%) Query: 54 INNALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGT 113 I ++++V GG R +++ RI+GV ++ EGTHF+ PWL IIYDVR KP+++A+ TGT Sbjct: 25 IQYSMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGT 84 Query: 114 KDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQ 173 KDLQMV++T RVL RP+V+QLP IY+ LG DYDERVLPSI NEVLK++VAQF+A++LITQ Sbjct: 85 KDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQ 144 Query: 174 REKVSRLIRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDK 233 RE +S+ IR+ L RA++F I L+DVSIT+MTF PEFT AVE KQIAQQDA+RA F+V+K Sbjct: 145 REIISQKIRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEK 204 Query: 234 ARQEKQGMVVRAQGEAKSAELIGEAIKKSRD-YVELKRLDTARDIAKILASSPNRVILDN 292 A QE+Q V+RA+GEA+SAE I +A+ K D + ++RL+ ++DIA+ LA+S N V L + Sbjct: 205 AEQERQASVIRAEGEAESAEFISKALAKVGDGLLLIRRLEASKDIAQTLANSSNVVYLPS 264 Query: 293 E 293 + Sbjct: 265 Q 265 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.320 0.136 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,577,174 Number of Sequences: 6497 Number of extensions: 61653 Number of successful extensions: 159 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 156 Number of HSP's gapped (non-prelim): 2 length of query: 310 length of database: 2,996,526 effective HSP length: 90 effective length of query: 220 effective length of database: 2,411,796 effective search space: 530595120 effective search space used: 530595120 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YHR176W Annotated|08:454228:455526| frame 1; YHR176W/FMO1; Verified; this gene contains 1 exon (432 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YHR176W YHR176W SGDID:S0001219, Chr VIII from 454227-455348 733 0.0 >YHR176W YHR176W SGDID:S0001219, Chr VIII from 454227-455348 Length = 373 Score = 733 bits (1892), Expect = 0.0 Identities = 360/360 (100%), Positives = 360/360 (100%) Query: 1 MTVNDKKRLAIIGGGPGGLAAARVFSQSLPNFEIEIFVKDYDIGGVWHYPEQKSDGRVMY 60 MTVNDKKRLAIIGGGPGGLAAARVFSQSLPNFEIEIFVKDYDIGGVWHYPEQKSDGRVMY Sbjct: 1 MTVNDKKRLAIIGGGPGGLAAARVFSQSLPNFEIEIFVKDYDIGGVWHYPEQKSDGRVMY 60 Query: 61 DHLETNISKKLMQFSGFPFEENVPLYPSRRNIWEYLKAYYKTFIANKDAISIHFSTEVTY 120 DHLETNISKKLMQFSGFPFEENVPLYPSRRNIWEYLKAYYKTFIANKDAISIHFSTEVTY Sbjct: 61 DHLETNISKKLMQFSGFPFEENVPLYPSRRNIWEYLKAYYKTFIANKDAISIHFSTEVTY 120 Query: 121 LKKKNSQWEITSKDELRTTKSDFDFVIVASGHYSVPKLPTNIAGLDLWFDNKGAFHSKDF 180 LKKKNSQWEITSKDELRTTKSDFDFVIVASGHYSVPKLPTNIAGLDLWFDNKGAFHSKDF Sbjct: 121 LKKKNSQWEITSKDELRTTKSDFDFVIVASGHYSVPKLPTNIAGLDLWFDNKGAFHSKDF 180 Query: 181 KNCEFAREKVVIVVGNGSSGQDIANQLTTVAKKVYNSIKEPASNQLKAKLIETVQTIDSA 240 KNCEFAREKVVIVVGNGSSGQDIANQLTTVAKKVYNSIKEPASNQLKAKLIETVQTIDSA Sbjct: 181 KNCEFAREKVVIVVGNGSSGQDIANQLTTVAKKVYNSIKEPASNQLKAKLIETVQTIDSA 240 Query: 241 DWKNRSVTLSDGRVLQNIDYIIFATGYYYSFPFIEPSVRLEVLGEGVTGDKHSSVNLHNL 300 DWKNRSVTLSDGRVLQNIDYIIFATGYYYSFPFIEPSVRLEVLGEGVTGDKHSSVNLHNL Sbjct: 241 DWKNRSVTLSDGRVLQNIDYIIFATGYYYSFPFIEPSVRLEVLGEGVTGDKHSSVNLHNL 300 Query: 301 WEHMIYVKDPTLSFILTPQLVIPFPLSELQAAIMVEVFCKSLPITTTFDSNACGTHNFPK 360 WEHMIYVKDPTLSFILTPQLVIPFPLSELQAAIMVEVFCKSLPITTTFDSNACGTHNFPK Sbjct: 301 WEHMIYVKDPTLSFILTPQLVIPFPLSELQAAIMVEVFCKSLPITTTFDSNACGTHNFPK 360 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.318 0.136 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,782,717 Number of Sequences: 6497 Number of extensions: 128203 Number of successful extensions: 343 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 342 Number of HSP's gapped (non-prelim): 1 length of query: 432 length of database: 2,996,526 effective HSP length: 93 effective length of query: 339 effective length of database: 2,392,305 effective search space: 810991395 effective search space used: 810991395 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YHR131C Annotated|08:367894:365342| frame 4; YHR131C; Uncharacterized; this gene contains 1 exon (850 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YHR131C YHR131C SGDID:S0001173, Chr VIII from 365342-367864, rev... 1684 0.0 YNL144C YNL144C SGDID:S0005088, Chr XIV from 352817-355039, reve... 350 7e-97 >YHR131C YHR131C SGDID:S0001173, Chr VIII from 365342-367864, reverse complement Length = 840 Score = 1684 bits (4362), Expect = 0.0 Identities = 840/840 (100%), Positives = 840/840 (100%) Query: 11 MANNRIERLKSPSSSSTCSMDEVLITSSNNSSSICLETMRQLPREGVSGQINIIKETAAS 70 MANNRIERLKSPSSSSTCSMDEVLITSSNNSSSICLETMRQLPREGVSGQINIIKETAAS Sbjct: 1 MANNRIERLKSPSSSSTCSMDEVLITSSNNSSSICLETMRQLPREGVSGQINIIKETAAS 60 Query: 71 SSSHAALFIKQDLYEHIDPLPAYPPSYDLVNPNKEVRFPIFGDTAPCPKSSLPPLYAPAV 130 SSSHAALFIKQDLYEHIDPLPAYPPSYDLVNPNKEVRFPIFGDTAPCPKSSLPPLYAPAV Sbjct: 61 SSSHAALFIKQDLYEHIDPLPAYPPSYDLVNPNKEVRFPIFGDTAPCPKSSLPPLYAPAV 120 Query: 131 YELTLISLKLERLSPYEISSNRSWRNFIIEINSTQLNFYHIDESLTKHIRNYSSGETKSE 190 YELTLISLKLERLSPYEISSNRSWRNFIIEINSTQLNFYHIDESLTKHIRNYSSGETKSE Sbjct: 121 YELTLISLKLERLSPYEISSNRSWRNFIIEINSTQLNFYHIDESLTKHIRNYSSGETKSE 180 Query: 191 KEDRIHSDLVHRSDQSQHLHHRLFTLPTRSASEFKKADQERISYRVKRDRSRYLTDEALY 250 KEDRIHSDLVHRSDQSQHLHHRLFTLPTRSASEFKKADQERISYRVKRDRSRYLTDEALY Sbjct: 181 KEDRIHSDLVHRSDQSQHLHHRLFTLPTRSASEFKKADQERISYRVKRDRSRYLTDEALY 240 Query: 251 KSFTLQNARFGIPTDYTKKSFVLRMSCESEQFLLRFSHIDDMIDWSMYLSIGISVSLDLE 310 KSFTLQNARFGIPTDYTKKSFVLRMSCESEQFLLRFSHIDDMIDWSMYLSIGISVSLDLE Sbjct: 241 KSFTLQNARFGIPTDYTKKSFVLRMSCESEQFLLRFSHIDDMIDWSMYLSIGISVSLDLE 300 Query: 311 VREYPDYRIVPRRRRRRRRRRRRRRHTHRSESSMGSFSQRFIRSNSRPDLIQRYSTGSST 370 VREYPDYRIVPRRRRRRRRRRRRRRHTHRSESSMGSFSQRFIRSNSRPDLIQRYSTGSST Sbjct: 301 VREYPDYRIVPRRRRRRRRRRRRRRHTHRSESSMGSFSQRFIRSNSRPDLIQRYSTGSST 360 Query: 371 NNNTTIRERSNTFTAGLLDHYCTGLSKTPTEALISSAASGESSDNSTLGSTRSLSGCSAS 430 NNNTTIRERSNTFTAGLLDHYCTGLSKTPTEALISSAASGESSDNSTLGSTRSLSGCSAS Sbjct: 361 NNNTTIRERSNTFTAGLLDHYCTGLSKTPTEALISSAASGESSDNSTLGSTRSLSGCSAS 420 Query: 431 RSIASRSLKFKIKNFFRPKNSSRTEKLHRLRSNSSNLNSVIETEEDDEHHESSGGDHPEP 490 RSIASRSLKFKIKNFFRPKNSSRTEKLHRLRSNSSNLNSVIETEEDDEHHESSGGDHPEP Sbjct: 421 RSIASRSLKFKIKNFFRPKNSSRTEKLHRLRSNSSNLNSVIETEEDDEHHESSGGDHPEP 480 Query: 491 GVPVNTTIKVERPMHRNRAISMPQRQSLRRAISEEVVPIKFPNSTVGESVHSPSPIEHLS 550 GVPVNTTIKVERPMHRNRAISMPQRQSLRRAISEEVVPIKFPNSTVGESVHSPSPIEHLS Sbjct: 481 GVPVNTTIKVERPMHRNRAISMPQRQSLRRAISEEVVPIKFPNSTVGESVHSPSPIEHLS 540 Query: 551 VDGCEIMLQSQNAVMKEELRSVASNLVANERDEASIRPKPQSSSIYLSGLAPNGESATDL 610 VDGCEIMLQSQNAVMKEELRSVASNLVANERDEASIRPKPQSSSIYLSGLAPNGESATDL Sbjct: 541 VDGCEIMLQSQNAVMKEELRSVASNLVANERDEASIRPKPQSSSIYLSGLAPNGESATDL 600 Query: 611 SQSSRSLCLTNRDAEINDDESATETDEDENDGETDEYAGDDTNDDTDDSNIGYAYGSESD 670 SQSSRSLCLTNRDAEINDDESATETDEDENDGETDEYAGDDTNDDTDDSNIGYAYGSESD Sbjct: 601 SQSSRSLCLTNRDAEINDDESATETDEDENDGETDEYAGDDTNDDTDDSNIGYAYGSESD 660 Query: 671 YSCLIEERIRNRRRASSTLSCFSNIPYGTDDIKWKPAIKEISRRRYLRDSLKCIKPFLDS 730 YSCLIEERIRNRRRASSTLSCFSNIPYGTDDIKWKPAIKEISRRRYLRDSLKCIKPFLDS Sbjct: 661 YSCLIEERIRNRRRASSTLSCFSNIPYGTDDIKWKPAIKEISRRRYLRDSLKCIKPFLDS 720 Query: 731 NDCLGKVIYIPVSGPTFETSNKIHFSNRQSLQKQKNHFLKGFIVGPTALIELNCKNKNAI 790 NDCLGKVIYIPVSGPTFETSNKIHFSNRQSLQKQKNHFLKGFIVGPTALIELNCKNKNAI Sbjct: 721 NDCLGKVIYIPVSGPTFETSNKIHFSNRQSLQKQKNHFLKGFIVGPTALIELNCKNKNAI 780 Query: 791 VGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDGQITA 850 VGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDGQITA Sbjct: 781 VGTTKDAEDHGEDDGDGDDGEDDDDDDDDDDDDDDDEDDDDDDDDDDDDDDDDDDGQITA 840 >YNL144C YNL144C SGDID:S0005088, Chr XIV from 352817-355039, reverse complement Length = 740 Score = 350 bits (897), Expect = 7e-97 Identities = 247/797 (30%), Positives = 380/797 (47%), Gaps = 120/797 (15%) Query: 19 LKSPSSSSTCSMDEVLITSSNNSSSICLETMRQLPREGVSG----QINIIKETAASSSSH 74 LK ++S+ SM + + SS S+SI + ++ + NI+ E S Sbjct: 20 LKLSQTASSISMGDEFLCSSTTSNSILDSPLPKVTFNHIDSITDINTNIMNEIVEPQSGV 79 Query: 75 AALFIKQDLYEHIDPLPAYPPSYDLVNPNKEVRFPIFGDTAPCPKSSLPPLYAPAVYELT 134 +++ IDP P PP YD NP+K +R+PI+ PC S PP Y P+V T Sbjct: 80 DVDVADKNVLYCIDPYPVEPPCYDFANPSKVIRYPIYEHCRPCLTSVKPPSYTPSVEHYT 139 Query: 135 LISLKLERLSPYEISSNRSWRNFIIEINSTQLNFYHIDESLTKHIRNYSSGETKSEKEDR 194 ++S+K+E+LSP+E +S+R W NFI++INSTQ+NFY ID+SLT+HI+NY G+ Sbjct: 140 VVSMKMEKLSPFENASSRLWNNFILQINSTQINFYSIDDSLTRHIKNYRGGDM------- 192 Query: 195 IHSDLVHRSDQSQHLHHRLFTL----PTRSASEFKKADQERISYRVKRDRSRYLTDEALY 250 D H S + HH +L T+S +F K D+ERI + RD ++L+DE L+ Sbjct: 193 --FDHSHHSKTASDRHHSARSLLNAFTTKSTYQFDKYDKERICGEIARDEHKFLSDERLF 250 Query: 251 KSFTLQNARFGIPTDYTKKSFVLRMSCESEQFLLRFSHIDDMIDWSMYLSIGISVSLDLE 310 KS++LQ A+ G+P DY+ + FVLRM CE +QFL++FSH+D++I W+MYL++GIS+SLDLE Sbjct: 251 KSYSLQCAKVGLPIDYSSRDFVLRMRCEGQQFLVQFSHVDELIYWAMYLNMGISLSLDLE 310 Query: 311 VREYPDYRIVPRRRRRRRRRRRRRRHTHRSESSMGSFSQRFIRSNSRPDLIQRYSTGSST 370 +RE P YR VPRRR R RR ++ S + + RS+S L++R T S Sbjct: 311 LREMPTYRSVPRRRHPRARRFKQHNKNKNKNKSRQNSDRNDSRSHSL--LLRRSHTSSVV 368 Query: 371 NNNTTIRERSNTFTAGLLDHYCTGLSKTPTEALISSAASGESSDNSTLGSTRSLSGCSAS 430 T ER T S++ + +L+ + S S D++ + SL+G S+ Sbjct: 369 TKVATGNERP------------TNKSRSRSLSLLPPSVSDASHDSNGPNDSGSLAGESSQ 416 Query: 431 RSIASRSLKFKIKNFFRPKNSSRTEKLHRL--RSNSSNLNSVIETEEDDEHHESSGGDHP 488 K++NFF+ +SSR + + S LNSV E +D+ Sbjct: 417 TDFCG-LFTSKLRNFFKTDSSSRKNSNMDIGQKMRSKELNSVQEEIDDN----------- 464 Query: 489 EPGVPVNTTIKVERPMHRNRAISMPQRQSLRRAISEEVVPIKFPNSTVGESVHSPS---P 545 G NT V L S + +++ E+ S S P Sbjct: 465 --GSTTNTNTSV-----------------LSSTFSPTAHSVLTAQTSIHENFRSRSNSNP 505 Query: 546 IEHLSVDGCEIMLQSQNAVMKEELRSVASNLVANERDEASIRPKPQSSSIYLSGLAPNGE 605 I+ L D + + + V + RS SN Sbjct: 506 IDPLRCDRSVLKINNFEPVYEGTGRSTISN------------------------------ 535 Query: 606 SATDLSQSSRSLCLTNRDAEINDDESATETDEDENDGETDEYAGDDTNDDTDDSNIGYAY 665 +++R L + ++N DE + DEDE+D +E D +D D + + Y Sbjct: 536 ---SAERTNREEKLNRGNEDVNGDE---DDDEDEDDANYEEDDEDGYVEDDDINRLVYLD 589 Query: 666 GSESDY-SCLIEERIRNRRRASSTLSCFS------------NIPYGTDDIKWKPAIKEIS 712 ES Y + +E ++ S C + N ++D KW PA + +S Sbjct: 590 ERESRYENADVEYGTIFSTKSFSVTGCLNHDFPKKLSLKCGNKNQSSNDSKWAPATQLVS 649 Query: 713 RRRYLRDSLKCIKPFLDSNDCLGKVIYIPVSGPTFETSNK----IHFSNRQSLQKQKNHF 768 R+RY++DSL+CIKP + + +GK+I+ P P FET+N + L KNH+ Sbjct: 650 RKRYIKDSLRCIKPLTEDHPWVGKIIFKPALPPAFETNNPPIRVYSGEDSTDLMHVKNHY 709 Query: 769 LKGFIVGPTALIELNCK 785 LK +IVG ++ K Sbjct: 710 LKPYIVGSCGFLKTGSK 726 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.312 0.130 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,882,910 Number of Sequences: 6497 Number of extensions: 322222 Number of successful extensions: 17312 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17088 Number of HSP's gapped (non-prelim): 12 length of query: 850 length of database: 2,996,526 effective HSP length: 99 effective length of query: 751 effective length of database: 2,353,323 effective search space: 1767345573 effective search space used: 1767345573 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YHL006C Annotated|08:98790:98338| frame 5; YHL006C/SHU1; Uncharacterized; this gene contains 1 exon (150 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YHL006C SHU1 SGDID:S0000998, Chr VIII from 98310-98789, reverse ... 224 4e-60 >YHL006C SHU1 SGDID:S0000998, Chr VIII from 98310-98789, reverse complement Length = 159 Score = 224 bits (571), Expect = 4e-60 Identities = 112/114 (98%), Positives = 113/114 (99%) Query: 1 MQFEERLQQLVESDWSLDQSSPNVLVIVLGDTARKYVELGGLKEHVTTNTVAGHVASRER 60 MQFEERLQQLVESDWSLDQSSPNVLVIVLGDTARKYVELGGLKEHVTTNTVAGHVASRER Sbjct: 1 MQFEERLQQLVESDWSLDQSSPNVLVIVLGDTARKYVELGGLKEHVTTNTVAGHVASRER 60 Query: 61 VSVVFLGRVKYLYMYLTRMQAQANGPQYSNVLVYGLWDLTATQDGPQQLRLLSL 114 VSVVFLGRVKYLYMYLTRMQAQANGPQYSNVLVYGLWDLTATQDGPQQLR L+L Sbjct: 61 VSVVFLGRVKYLYMYLTRMQAQANGPQYSNVLVYGLWDLTATQDGPQQLRYLAL 114 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.321 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 849,418 Number of Sequences: 6497 Number of extensions: 30421 Number of successful extensions: 62 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61 Number of HSP's gapped (non-prelim): 1 length of query: 150 length of database: 2,996,526 effective HSP length: 82 effective length of query: 68 effective length of database: 2,463,772 effective search space: 167536496 effective search space used: 167536496 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 318 (127.1 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YHR056C Annotated|08:217835:215184| frame 6; YHR056C/RSC30; Verified; this gene contains 1 exon (883 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YHR056C RSC30 SGDID:S0001098, Chr VIII from 215183-217681, rever... 1651 0.0 YHR054C YHR054C SGDID:S0001096, Chr VIII from 213185-214249, rev... 697 0.0 YDR303C RSC3 SGDID:S0002711, Chr IV from 1068720-1071377, revers... 228 3e-60 >YHR056C RSC30 SGDID:S0001098, Chr VIII from 215183-217681, reverse complement Length = 832 Score = 1651 bits (4276), Expect = 0.0 Identities = 832/832 (100%), Positives = 832/832 (100%) Query: 52 MVAVPSASGMSTHGNGQGSNHFSQGNGVNQKNVMIQTQYPIMQTSIEAFNFSFNPSVDTA 111 MVAVPSASGMSTHGNGQGSNHFSQGNGVNQKNVMIQTQYPIMQTSIEAFNFSFNPSVDTA Sbjct: 1 MVAVPSASGMSTHGNGQGSNHFSQGNGVNQKNVMIQTQYPIMQTSIEAFNFSFNPSVDTA 60 Query: 112 MQWTKAASYQNNNTNNNTAPRQNSSTVSSNVHGNTIVRSDSPDVPSMDQIREYNTRLQLV 171 MQWTKAASYQNNNTNNNTAPRQNSSTVSSNVHGNTIVRSDSPDVPSMDQIREYNTRLQLV Sbjct: 61 MQWTKAASYQNNNTNNNTAPRQNSSTVSSNVHGNTIVRSDSPDVPSMDQIREYNTRLQLV 120 Query: 172 NAQSFDYTDNPYSFNVGINQDSAVFDLMTSPFTQEEVLIKEIDFLKNKLLDLQSLQLKSL 231 NAQSFDYTDNPYSFNVGINQDSAVFDLMTSPFTQEEVLIKEIDFLKNKLLDLQSLQLKSL Sbjct: 121 NAQSFDYTDNPYSFNVGINQDSAVFDLMTSPFTQEEVLIKEIDFLKNKLLDLQSLQLKSL 180 Query: 232 KEKSNLNADNTTANKINKTGENSKKGKVDGKRAGFDHQTSRTSQSSQKYFTALTITDVQS 291 KEKSNLNADNTTANKINKTGENSKKGKVDGKRAGFDHQTSRTSQSSQKYFTALTITDVQS Sbjct: 181 KEKSNLNADNTTANKINKTGENSKKGKVDGKRAGFDHQTSRTSQSSQKYFTALTITDVQS 240 Query: 292 LVQVKPLKDTPNYLFTKNFIIFRDHYLFKFYNILHDICHINQFKVSPPNNKNHQQYMEVC 351 LVQVKPLKDTPNYLFTKNFIIFRDHYLFKFYNILHDICHINQFKVSPPNNKNHQQYMEVC Sbjct: 241 LVQVKPLKDTPNYLFTKNFIIFRDHYLFKFYNILHDICHINQFKVSPPNNKNHQQYMEVC 300 Query: 352 KVNFPPKAIIIETLNSESLNNLNIEEFLPIFDKTLLLEFVHNSFPNGDTCPSFSTVDLPL 411 KVNFPPKAIIIETLNSESLNNLNIEEFLPIFDKTLLLEFVHNSFPNGDTCPSFSTVDLPL Sbjct: 301 KVNFPPKAIIIETLNSESLNNLNIEEFLPIFDKTLLLEFVHNSFPNGDTCPSFSTVDLPL 360 Query: 412 SQLTKLGELTVLLLLLNDSMTLFNKQAINNHVSALMNNLRLIRSQITLINLEYYDQETIK 471 SQLTKLGELTVLLLLLNDSMTLFNKQAINNHVSALMNNLRLIRSQITLINLEYYDQETIK Sbjct: 361 SQLTKLGELTVLLLLLNDSMTLFNKQAINNHVSALMNNLRLIRSQITLINLEYYDQETIK 420 Query: 472 FIAITKFYESLYMHDDHKSSLDEDLSCLLSFQIKDFKLFHFLKKMYYSRHSLLGQSSFMV 531 FIAITKFYESLYMHDDHKSSLDEDLSCLLSFQIKDFKLFHFLKKMYYSRHSLLGQSSFMV Sbjct: 421 FIAITKFYESLYMHDDHKSSLDEDLSCLLSFQIKDFKLFHFLKKMYYSRHSLLGQSSFMV 480 Query: 532 PAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLETLT 591 PAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLETLT Sbjct: 481 PAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLETLT 540 Query: 592 MGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKTSN 651 MGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKTSN Sbjct: 541 MGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKTSN 600 Query: 652 SERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEILQ 711 SERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEILQ Sbjct: 601 SERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEILQ 660 Query: 712 NFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDEMN 771 NFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDEMN Sbjct: 661 NFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDEMN 720 Query: 772 SNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPVSE 831 SNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPVSE Sbjct: 721 SNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPVSE 780 Query: 832 LNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN 883 LNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN Sbjct: 781 LNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN 832 >YHR054C YHR054C SGDID:S0001096, Chr VIII from 213185-214249, reverse complement Length = 354 Score = 697 bits (1799), Expect = 0.0 Identities = 354/354 (100%), Positives = 354/354 (100%) Query: 530 MVPAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLET 589 MVPAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLET Sbjct: 1 MVPAAENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVNLTKIESLLET 60 Query: 590 LTMGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKT 649 LTMGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKT Sbjct: 61 LTMGVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKT 120 Query: 650 SNSERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEI 709 SNSERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEI Sbjct: 121 SNSERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEI 180 Query: 710 LQNFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDE 769 LQNFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDE Sbjct: 181 LQNFIAITFAIFQRCEVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEIIVSFLRDE 240 Query: 770 MNSNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPV 829 MNSNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPV Sbjct: 241 MNSNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKNKNVLLKFPV 300 Query: 830 SELNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN 883 SELNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN Sbjct: 301 SELNRIYLKFKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDFYDAFYN 354 >YDR303C RSC3 SGDID:S0002711, Chr IV from 1068720-1071377, reverse complement Length = 885 Score = 228 bits (581), Expect = 3e-60 Identities = 240/963 (24%), Positives = 429/963 (44%), Gaps = 165/963 (17%) Query: 2 MDMQVRKVRKPPACTQCRKRKIGCDRAKPICGNCVKYNKPDCFYPDGPGKMVAVPSASGM 61 MD++ RK++KPPAC QCRKRKIGCDR KPICGNC+K+NK DCFYPD PG+ V S+S Sbjct: 1 MDIRGRKMKKPPACVQCRKRKIGCDRVKPICGNCMKHNKMDCFYPDVPGQYVPSSSSSSN 60 Query: 62 STH-GNGQGSNHFSQGNGVNQKNVMIQTQYPIMQTSIEAFNFSFNPSVDTAMQWTKAASY 120 + NG N + V+++ + + P + S+E +T +Q A + Sbjct: 61 TRQVANGPYLNSYYASRRVSKETAALLQKNPEL-ASLEQIR-----EYNTRLQLLNAQNQ 114 Query: 121 QNNNTN--NNTAPRQNSSTVSSNVHGNTIVRSDSPDVPSMDQIREYNTRLQLVNAQSFDY 178 NN ++ N T +Q++ + +V S + + E +T L V Sbjct: 115 LNNRSSAANATLNQQHTQYIPKSV--------PSLESKPVTSANESSTPLNWV------- 159 Query: 179 TDNPYSFNVGINQDSAVFDLMTSPFTQEEVLIKEIDFLKNKLLDLQSLQLK-------SL 231 Q A+F ++TSP+TQ+E++ E++FLK +LL+LQ + K L Sbjct: 160 ------------QGPAIFHMLTSPYTQDEIINHEMNFLKGRLLELQEITGKKITGVNLDL 207 Query: 232 KEKSNLNADNTTANKINKTGENSKKGKV--------DGKR-------------AGFDHQT 270 K+ S+ ++ +N+ + KK K+ DGK D Q Sbjct: 208 KQDSSAQMQSSHSNRNQEEFLTIKKRKLSEDGVTDGDGKPIPESERRPHLNEFKDLDPQF 267 Query: 271 SRTSQSSQKYFTALTITDVQSLVQVKPLKDTPNYLFTKNFIIFRDHYLFKFYNILHDICH 330 T++ + +A++ + ++ + + P + +F ++I RD +LFKF+N L+ + Sbjct: 268 LDTNKVFNVFNSAIS-EEGRNRLWLLPKNINKSSIFQIQYLIERDPFLFKFFNDLNILIE 326 Query: 331 ------INQFKVSPPNNKNHQQYMEVCKVNFPPKAIIIETLNSESLNNLNIEEFLPIFDK 384 ++ S + + + ++ K FP ++I +N LPI Sbjct: 327 TQFNGPLHDLVASRNSIERNSGISQILK--FPSQSITQTLINKYLSTITETNSILPILKP 384 Query: 385 TLLLEFVHNSFP----NGDTCPSFSTV----DLPLSQLTKLGELTVLLLLLNDSM--TLF 434 LL V FP N F T+ + QL LG +T+ LL+L +S+ T+ Sbjct: 385 KRLLPIVEQLFPSNTINKPNSKDFETIFQVFSVTNDQLLNLGFITLCLLILFESLNSTVL 444 Query: 435 NKQAINNHV---SALMNNLRLIRSQITLINLEYYDQ-----ETIKFIAITKFYESLYMHD 486 + H+ + L N L L++S +T + E + ET++FI++ K+Y+ ++ D Sbjct: 445 IPLRDDEHLQLFNVLFNYLPLLKSNLTTLRFEIEKRSMCNIETLRFISLWKYYQ--FVMD 502 Query: 487 DHKSS-----LDED--LSCLLSFQIKDFKLFH-----FLKKMYYSRHSLLGQSSFMVPAA 534 SS DED ++CLLS + H F+ K Y RH LGQ ++ Sbjct: 503 TSSSSSFVIDYDEDMHMACLLSLNHETQNQSHILTWNFIFKNYCWRHLFLGQLPLLMSEP 562 Query: 535 -ENLSPIPASIDTNDIPLIANDLKLLETQAKLINILQGVPFYLPVN-LTKIESLLETLTM 592 N +PI ID PL+ ND +L++ + L+ LQ L ++ + ++ LL+ + Sbjct: 563 FTNSTPI---ID----PLLNNDFELIDFEVNLMKYLQSKDQQLSIDKIIQLIKLLKNKNI 615 Query: 593 GVSNTVDLYFHDNEVRKEWKDTLNFINTIVYTNFFLFVQNESSLSMAVQHSSNNNKTSNS 652 VS + D+L + N+++Y NF+L +Q E+ Sbjct: 616 EVSQGC---LTTPSIINNIMDSLIYRNSMLYLNFYLLLQFET------------------ 654 Query: 653 ERCAKDLMKIISNMHIFYSITFNFIFPIKSIKSFSSGNNRFHSNGKEFLFANHFIEILQN 712 K+ K + F ++ +F + S + N +F G EF F N I +LQ Sbjct: 655 ---LKNYAKFNEILEDFLELSRETLFFVFS----NLANIKF--AGHEFTFINKSIVVLQT 705 Query: 713 FIAITFAIFQRC-----------EVILYDEFYKNLSNEEINVQLLLIHDKILEILKKIEI 761 + + A++QR E+ + + N N + +IH I+ KI + Sbjct: 706 LVLMLLALYQRSFDSSKRTNDANEISEQTDIHSNNDNSKRIKNKNVIH----LIINKIAM 761 Query: 762 IVS-FLRDEMNSNGSFKSIKGFNKVLNLIKYMLRFSKKKQNFARNSDNNNVTDYSQSAKN 820 ++S + ++ N +++ K+ + KY+ + K + +S+ + +S + Sbjct: 762 LLSDYTKNCKKQNKLIENL--IIKIKTISKYIKNLEENKVTTSADSNYSINNGFSGISAE 819 Query: 821 KNVLLKFPVSELNRIYLK---FKEISDFLMEREVVQRSIIIDKDLESDNLGITTANFNDF 877 + + L +S+++ +K +++ + + V+ + +D D SD G+T NFN+ Sbjct: 820 QLIKLNHELSKISESLIKTDFYEQRKNSTVSNGVLGAAAPVDSDANSDTFGLTKENFNEV 879 Query: 878 YDA 880 ++A Sbjct: 880 FEA 882 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,841,349 Number of Sequences: 6497 Number of extensions: 291617 Number of successful extensions: 1970 Number of sequences better than 1.0e-30: 3 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 1953 Number of HSP's gapped (non-prelim): 5 length of query: 883 length of database: 2,996,526 effective HSP length: 99 effective length of query: 784 effective length of database: 2,353,323 effective search space: 1845005232 effective search space used: 1845005232 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 327 (130.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJR092W Annotated|10:598649:602995| frame 2; YJR092W/BUD4; Verified; this gene contains 1 exon (1448 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJR092W BUD4 SGDID:S0003852, Chr X from 598811-602773 2652 0.0 >YJR092W BUD4 SGDID:S0003852, Chr X from 598811-602773 Length = 1320 Score = 2652 bits (6873), Expect = 0.0 Identities = 1320/1320 (100%), Positives = 1320/1320 (100%) Query: 129 MAQDIDKLARDEEKPVKLSSSPLKFTLKSTQPLLSYPESPIHRSSIEIETNYDDEDEEEE 188 MAQDIDKLARDEEKPVKLSSSPLKFTLKSTQPLLSYPESPIHRSSIEIETNYDDEDEEEE Sbjct: 1 MAQDIDKLARDEEKPVKLSSSPLKFTLKSTQPLLSYPESPIHRSSIEIETNYDDEDEEEE 60 Query: 189 DAYTCLTQSPQILHSPSRIPITNAVSINKLNLDFTLNPNESDKSLVSDTSVDSTGRELDT 248 DAYTCLTQSPQILHSPSRIPITNAVSINKLNLDFTLNPNESDKSLVSDTSVDSTGRELDT Sbjct: 61 DAYTCLTQSPQILHSPSRIPITNAVSINKLNLDFTLNPNESDKSLVSDTSVDSTGRELDT 120 Query: 249 KTIPELPFCMSSTPEMTPVDEKCNLPSKLLNTSNNSHSDSRSANSLCGGFKHFNESSRVL 308 KTIPELPFCMSSTPEMTPVDEKCNLPSKLLNTSNNSHSDSRSANSLCGGFKHFNESSRVL Sbjct: 121 KTIPELPFCMSSTPEMTPVDEKCNLPSKLLNTSNNSHSDSRSANSLCGGFKHFNESSRVL 180 Query: 309 IPAKIIQSLLMRMRLLKTMLCRDLQQNMEHIDEAFDEKKVLDEGCSNEPVTFLGENDTRS 368 IPAKIIQSLLMRMRLLKTMLCRDLQQNMEHIDEAFDEKKVLDEGCSNEPVTFLGENDTRS Sbjct: 181 IPAKIIQSLLMRMRLLKTMLCRDLQQNMEHIDEAFDEKKVLDEGCSNEPVTFLGENDTRS 240 Query: 369 IVYSNKGTNANVQEFSQEDSLAHSEPKFKDLNATSDDVWNEDKETDANISTSTKSEESYI 428 IVYSNKGTNANVQEFSQEDSLAHSEPKFKDLNATSDDVWNEDKETDANISTSTKSEESYI Sbjct: 241 IVYSNKGTNANVQEFSQEDSLAHSEPKFKDLNATSDDVWNEDKETDANISTSTKSEESYI 300 Query: 429 ADYKVTRQEDWDTKKLHQESEHANEQPAIIPQKDSSEETFTELNNESEFQRNFKDGEEYR 488 ADYKVTRQEDWDTKKLHQESEHANEQPAIIPQKDSSEETFTELNNESEFQRNFKDGEEYR Sbjct: 301 ADYKVTRQEDWDTKKLHQESEHANEQPAIIPQKDSSEETFTELNNESEFQRNFKDGEEYR 360 Query: 489 IVQHEESLYGQRTKSPEENIINGSEIGVDHGEAAEVNEPLAKTSAEEHDLSSSCEDQSVS 548 IVQHEESLYGQRTKSPEENIINGSEIGVDHGEAAEVNEPLAKTSAEEHDLSSSCEDQSVS Sbjct: 361 IVQHEESLYGQRTKSPEENIINGSEIGVDHGEAAEVNEPLAKTSAEEHDLSSSCEDQSVS 420 Query: 549 EARNKDRIEEKEVETKDENIETEKDESEYHKVEENEEPEHVPLLPPLPRWEEIQFNEPFI 608 EARNKDRIEEKEVETKDENIETEKDESEYHKVEENEEPEHVPLLPPLPRWEEIQFNEPFI Sbjct: 421 EARNKDRIEEKEVETKDENIETEKDESEYHKVEENEEPEHVPLLPPLPRWEEIQFNEPFI 480 Query: 609 DENDTSNDSIDLTRSMKPSDYISIWHIQEEEIKSNSPESIANSQFSQQSSITTASTVDSK 668 DENDTSNDSIDLTRSMKPSDYISIWHIQEEEIKSNSPESIANSQFSQQSSITTASTVDSK Sbjct: 481 DENDTSNDSIDLTRSMKPSDYISIWHIQEEEIKSNSPESIANSQFSQQSSITTASTVDSK 540 Query: 669 KDNGSTSFKFKPRIVSRSRIYNPKSRVSSLNYYDNEDYILSNSEWNALDPMRRNTLISKR 728 KDNGSTSFKFKPRIVSRSRIYNPKSRVSSLNYYDNEDYILSNSEWNALDPMRRNTLISKR Sbjct: 541 KDNGSTSFKFKPRIVSRSRIYNPKSRVSSLNYYDNEDYILSNSEWNALDPMRRNTLISKR 600 Query: 729 IQDNIRTQKGHAPLIRPSIMKLNGEDSGFQNHFLEVEQPQEHENIPLSTHLSEQDITTNV 788 IQDNIRTQKGHAPLIRPSIMKLNGEDSGFQNHFLEVEQPQEHENIPLSTHLSEQDITTNV Sbjct: 601 IQDNIRTQKGHAPLIRPSIMKLNGEDSGFQNHFLEVEQPQEHENIPLSTHLSEQDITTNV 660 Query: 789 GLDEQKLPTNTQDEAEISIREIESAGDITFNRGDLLSLSFDEELGQDFANFLDALDHDST 848 GLDEQKLPTNTQDEAEISIREIESAGDITFNRGDLLSLSFDEELGQDFANFLDALDHDST Sbjct: 661 GLDEQKLPTNTQDEAEISIREIESAGDITFNRGDLLSLSFDEELGQDFANFLDALDHDST 720 Query: 849 SFNHGPDDSSSFQRDSSKKSFNSLWESSYELKPPPSIRKQPIAPDVLQKLLESDTKDDAD 908 SFNHGPDDSSSFQRDSSKKSFNSLWESSYELKPPPSIRKQPIAPDVLQKLLESDTKDDAD Sbjct: 721 SFNHGPDDSSSFQRDSSKKSFNSLWESSYELKPPPSIRKQPIAPDVLQKLLESDTKDDAD 780 Query: 909 LEKIREERITEPRTGLGIGMLKTPVKDVSIALAASIKGYEASFSDTDSRPEGMNNSDAIT 968 LEKIREERITEPRTGLGIGMLKTPVKDVSIALAASIKGYEASFSDTDSRPEGMNNSDAIT Sbjct: 781 LEKIREERITEPRTGLGIGMLKTPVKDVSIALAASIKGYEASFSDTDSRPEGMNNSDAIT 840 Query: 969 LNMFDDFEEDKMTPSTPVRSISPIKRHVSSPFKVVKAGNKQENNEINIKAEEEIEPMTQQ 1028 LNMFDDFEEDKMTPSTPVRSISPIKRHVSSPFKVVKAGNKQENNEINIKAEEEIEPMTQQ Sbjct: 841 LNMFDDFEEDKMTPSTPVRSISPIKRHVSSPFKVVKAGNKQENNEINIKAEEEIEPMTQQ 900 Query: 1029 ETDGLKQDIPPLLAQTKDNVEAKEETITQLEEPQDVEQEFPDMGTLYLSIKAISTLALYG 1088 ETDGLKQDIPPLLAQTKDNVEAKEETITQLEEPQDVEQEFPDMGTLYLSIKAISTLALYG Sbjct: 901 ETDGLKQDIPPLLAQTKDNVEAKEETITQLEEPQDVEQEFPDMGTLYLSIKAISTLALYG 960 Query: 1089 TKSHRATYAIVFDNGENVVQTPWESLPYDGNIRINKEFELPIDFKGKAETSSASSERDSY 1148 TKSHRATYAIVFDNGENVVQTPWESLPYDGNIRINKEFELPIDFKGKAETSSASSERDSY Sbjct: 961 TKSHRATYAIVFDNGENVVQTPWESLPYDGNIRINKEFELPIDFKGKAETSSASSERDSY 1020 Query: 1149 KKCVITLKCKYEKPRHELVEIVDKVPVGKSFFGKTKYKFEKKYVQKKPKQDEWDYLFAQD 1208 KKCVITLKCKYEKPRHELVEIVDKVPVGKSFFGKTKYKFEKKYVQKKPKQDEWDYLFAQD Sbjct: 1021 KKCVITLKCKYEKPRHELVEIVDKVPVGKSFFGKTKYKFEKKYVQKKPKQDEWDYLFAQD 1080 Query: 1209 GSFARCEIEINEEFLKNVAFNTSHMHYNMINKWSRIADKIHGSKRLYELPRKAPHKVASL 1268 GSFARCEIEINEEFLKNVAFNTSHMHYNMINKWSRIADKIHGSKRLYELPRKAPHKVASL Sbjct: 1081 GSFARCEIEINEEFLKNVAFNTSHMHYNMINKWSRIADKIHGSKRLYELPRKAPHKVASL 1140 Query: 1269 DVEACFLERTSAFEQFPKQFSLVNKIVSKYKLQQNIYKEGYLLQDGGDLKGKIENRFFKL 1328 DVEACFLERTSAFEQFPKQFSLVNKIVSKYKLQQNIYKEGYLLQDGGDLKGKIENRFFKL Sbjct: 1141 DVEACFLERTSAFEQFPKQFSLVNKIVSKYKLQQNIYKEGYLLQDGGDLKGKIENRFFKL 1200 Query: 1329 HGSQLSGYHEISRKAKIDINLLKVTKVLRNEDIQADNGGQRNFTDWVLFNECFQLVFDDG 1388 HGSQLSGYHEISRKAKIDINLLKVTKVLRNEDIQADNGGQRNFTDWVLFNECFQLVFDDG Sbjct: 1201 HGSQLSGYHEISRKAKIDINLLKVTKVLRNEDIQADNGGQRNFTDWVLFNECFQLVFDDG 1260 Query: 1389 ERITFNAECSNEEKSDWYNKLQEVVELNVFHQPWVKKYCEKLAEEEKTRTTGHNLKQDFN 1448 ERITFNAECSNEEKSDWYNKLQEVVELNVFHQPWVKKYCEKLAEEEKTRTTGHNLKQDFN Sbjct: 1261 ERITFNAECSNEEKSDWYNKLQEVVELNVFHQPWVKKYCEKLAEEEKTRTTGHNLKQDFN 1320 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.309 0.128 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,727,666 Number of Sequences: 6497 Number of extensions: 496992 Number of successful extensions: 2749 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2746 Number of HSP's gapped (non-prelim): 1 length of query: 1448 length of database: 2,996,526 effective HSP length: 103 effective length of query: 1345 effective length of database: 2,327,335 effective search space: 3130265575 effective search space used: 3130265575 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 329 (131.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL159W Annotated|10:120444:121607| frame 3; YJL159W/HSP150; Verified; this gene contains 1 exon (387 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKL164C PIR1 SGDID:S0001647, Chr XI from 141796-142821, reverse ... 519 e-148 YJL159W HSP150 SGDID:S0003695, Chr X from 120444-121376 507 e-144 YKL163W PIR3 SGDID:S0001646, Chr XI from 144403-145380 435 e-123 YJL158C CIS3 SGDID:S0003694, Chr X from 121962-122645, reverse c... 221 2e-58 >YKL164C PIR1 SGDID:S0001647, Chr XI from 141796-142821, reverse complement Length = 341 Score = 519 bits (1336), Expect = e-148 Identities = 284/391 (72%), Positives = 309/391 (79%), Gaps = 54/391 (13%) Query: 1 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS 60 MQYKK+LVASAL AT+LAAYAP +PWSTLTP+ATY GG+TDY+STFGIAV+PI Sbjct: 1 MQYKKSLVASALVATSLAAYAPKDPWSTLTPSATYKGGITDYSSTFGIAVEPI------- 53 Query: 61 SAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVS 120 ATTASSKAKRAA A+SQIGDGQIQATTKTTAAAVS Sbjct: 54 --ATTASSKAKRAA------------------------AISQIGDGQIQATTKTTAAAVS 87 Query: 121 R--DGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTK 178 + DGQIQATTKT AAAVSQI DGQIQATT T + K+TAAAVSQIGDGQ+QATTK Sbjct: 88 QIGDGQIQATTKTK-----AAAVSQIGDGQIQATTKTTSAKTTAAAVSQIGDGQIQATTK 142 Query: 179 TTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTA 238 T AAAVSQIGDGQ+QATTKTTAAAVSQIGDGQ+QATTKTTAAAVSQIGDGQ+QATT TT Sbjct: 143 TKAAAVSQIGDGQIQATTKTTAAAVSQIGDGQIQATTKTTAAAVSQIGDGQIQATTNTTV 202 Query: 239 AAVSQITDGQVQATTKTTQAASQVSDGQVQATTATSASAA--ATSTDPVDAVSCKTSGTL 296 A VSQITDGQ+QATT T+ AT S + A TDPV A +CK+SGTL Sbjct: 203 APVSQITDGQIQATTLTS------------ATIIPSPAPAPITNGTDPVTAETCKSSGTL 250 Query: 297 EMNLKGGILTDGKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPDGNLAIGDNDVFYQ 356 EMNLKGGILTDGKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITP+GNLAIGD D FYQ Sbjct: 251 EMNLKGGILTDGKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPEGNLAIGDQDTFYQ 310 Query: 357 CLSGTFYNLYDEHIGSQCTPVHLEAIDLIDC 387 CLSG FYNLYDEHIG+QC VHL+AIDL++C Sbjct: 311 CLSGNFYNLYDEHIGTQCNAVHLQAIDLLNC 341 >YJL159W HSP150 SGDID:S0003695, Chr X from 120444-121376 Length = 310 Score = 507 bits (1306), Expect = e-144 Identities = 281/302 (93%), Positives = 288/302 (95%), Gaps = 3/302 (0%) Query: 1 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS 60 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS Sbjct: 1 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS 60 Query: 61 SAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVS 120 SAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVS Sbjct: 61 SAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVS 120 Query: 121 RDGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTKTT 180 RDGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTKTT Sbjct: 121 RDGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTKTT 180 Query: 181 AAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAA 240 AAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAA Sbjct: 181 AAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAA 240 Query: 241 VSQITDGQVQATTKTTQAASQVSDGQVQATTATSASAAATSTD--PVDAVSCKTSGTLEM 298 VSQITDGQVQATTKTTQAASQVSDGQVQATTA +ST+ PV + +C T+ TL + Sbjct: 241 VSQITDGQVQATTKTTQAASQVSDGQVQATTAWLLVTMMSSTNVCPVLSTTC-TTNTLVV 299 Query: 299 NL 300 N+ Sbjct: 300 NV 301 Score = 204 bits (520), Expect = 1e-53 Identities = 140/247 (56%), Positives = 163/247 (65%), Gaps = 34/247 (13%) Query: 84 AATTTASVSTKSTAAAVSQIG--DGQIQATTKTTAAAVSRDGQIQATTKTTSAKTTAA-- 139 AATT A+ + + ++ G + T AV I T+ +SA TTA+ Sbjct: 13 AATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQ---PISTTSSASSAATTASSK 69 Query: 140 ---AVSQISDGQIQATTTT--LAPKSTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQA 194 A SQI DGQ+QA TTT ++ KSTAAAVSQIGDGQ+QATTKTTAAAVS+ DGQ+QA Sbjct: 70 AKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVSR--DGQIQA 127 Query: 195 TTKTT-----AAAVSQIGDGQVQATT-----KTTAAAVSQIGDGQVQATTKTTAAAVSQI 244 TTKTT AAAVSQI DGQ+QATT K+TAAAVSQIGDGQVQATTKTTAAAVSQI Sbjct: 128 TTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTKTTAAAVSQI 187 Query: 245 TDGQVQATTKTTQAA-SQVSDGQVQATTATSASAA---------ATSTDPVDAVSCKTSG 294 DGQVQATTKTT AA SQ+ DGQVQATT T+A+A AT+ AVS T G Sbjct: 188 GDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQITDG 247 Query: 295 TLEMNLK 301 ++ K Sbjct: 248 QVQATTK 254 Score = 167 bits (423), Expect = 3e-42 Identities = 109/191 (57%), Positives = 125/191 (65%), Gaps = 20/191 (10%) Query: 131 TTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQA-------TTKTTAAA 183 T A T AV IS ++ T A A SQIGDGQVQA +TK+TAAA Sbjct: 40 TDYASTFGIAVQPISTTSSASSAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAA 99 Query: 184 VSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTT-----AAAVSQIGDGQVQATT---- 234 VSQIGDGQ+QATTKTTAAAVS+ DGQ+QATTKTT AAAVSQI DGQ+QATT Sbjct: 100 VSQIGDGQIQATTKTTAAAVSR--DGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLA 157 Query: 235 -KTTAAAVSQITDGQVQATTKTTQAA-SQVSDGQVQATTATSASAAATSTDPVDAVSCKT 292 K+TAAAVSQI DGQVQATTKTT AA SQ+ DGQVQATT T+A+A + D + KT Sbjct: 158 PKSTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKT 217 Query: 293 SGTLEMNLKGG 303 + + G Sbjct: 218 TAAAVSQIGDG 228 >YKL163W PIR3 SGDID:S0001646, Chr XI from 144403-145380 Length = 325 Score = 435 bits (1118), Expect = e-123 Identities = 253/387 (65%), Positives = 282/387 (72%), Gaps = 62/387 (16%) Query: 1 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS 60 MQYKK LV SALAAT+LAAYAP +PWSTLTP+ATY GG+TDY+S+FGIA++ ++T Sbjct: 1 MQYKKPLVVSALAATSLAAYAPKDPWSTLTPSATYKGGITDYSSSFGIAIEAVAT----- 55 Query: 61 SAATTASSKAKRAASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAVS 120 SA++ ASSKAKRAAS QIGDGQ+QA T Sbjct: 56 SASSVASSKAKRAAS--------------------------QIGDGQVQAAT-------- 81 Query: 121 RDGQIQATTKTTSAKTTAAAVSQISDGQIQATTTTLAPKSTAAAVSQIGDGQVQATTKTT 180 TT S K+TAAAVSQI+DGQ+QA KSTAAAVSQI DGQVQA K+T Sbjct: 82 -------TTAAVSKKSTAAAVSQITDGQVQAA------KSTAAAVSQITDGQVQAA-KST 127 Query: 181 AAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAA 240 AAAVSQI DGQVQA K+TAAAVSQI DGQVQA K+TAAA SQI DGQVQATT T AAA Sbjct: 128 AAAVSQITDGQVQAA-KSTAAAVSQITDGQVQAA-KSTAAAASQISDGQVQATTSTKAAA 185 Query: 241 VSQITDGQVQATTKTTQAASQVSDGQVQATTATSASAAATSTDPVDAVSCKTSGTLEMNL 300 SQITDGQ+QA+ KTT ASQVSDGQVQAT + DPVD VSC + TL M+L Sbjct: 186 -SQITDGQIQAS-KTTSGASQVSDGQVQATAEVK-----DANDPVDVVSCNNNSTLSMSL 238 Query: 301 KGGILTDGKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPDGNLAIGDNDVFYQCLSG 360 GILTD KGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITP+GNLA+GD D FYQCLSG Sbjct: 239 SKGILTDRKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPEGNLALGDQDTFYQCLSG 298 Query: 361 TFYNLYDEHIGSQCTPVHLEAIDLIDC 387 FYNLYD+HIGSQC V+L+AIDLIDC Sbjct: 299 DFYNLYDKHIGSQCHEVYLQAIDLIDC 325 >YJL158C CIS3 SGDID:S0003694, Chr X from 121962-122645, reverse complement Length = 227 Score = 221 bits (562), Expect = 2e-58 Identities = 119/239 (49%), Positives = 152/239 (63%), Gaps = 12/239 (5%) Query: 149 IQATTTTLAPKSTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQIGD 208 +Q LA A + + +G +T I G + TT T AV I Sbjct: 1 MQFKNVALAASVAALSATASAEGYTPGEPWSTLTPTGSISCGAAEYTT-TFGIAVQAI-- 57 Query: 209 GQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQITDGQVQATTKTTQAASQVSDGQVQ 268 ++K +SQIGDGQVQAT+ AA +Q TD Q QATT T +S+ Sbjct: 58 ----TSSKAKRDVISQIGDGQVQATS----AATAQATDSQAQATTTATPTSSEKISSSA- 108 Query: 269 ATTATSASAAATSTDPVDAVSCKTSGTLEMNLKGGILTDGKGRIGSIVANRQFQFDGPPP 328 + T+T+A++++ +T + SCK SGTLE+ LK G+LTD KGRIGSIVANRQFQFDGPPP Sbjct: 109 SKTSTNATSSSCATPSLKDSSCKNSGTLELTLKDGVLTDAKGRIGSIVANRQFQFDGPPP 168 Query: 329 QAGAIYAAGWSITPDGNLAIGDNDVFYQCLSGTFYNLYDEHIGSQCTPVHLEAIDLIDC 387 QAGAIYAAGWSIT DG LA+GD+DVFYQCLSG FYNLYD+++ QC+ +HLEA+ L+DC Sbjct: 169 QAGAIYAAGWSITEDGYLALGDSDVFYQCLSGNFYNLYDQNVAEQCSAIHLEAVSLVDC 227 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.306 0.117 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,670,742 Number of Sequences: 6497 Number of extensions: 59353 Number of successful extensions: 2704 Number of sequences better than 1.0e-30: 4 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2479 Number of HSP's gapped (non-prelim): 12 length of query: 387 length of database: 2,996,526 effective HSP length: 92 effective length of query: 295 effective length of database: 2,398,802 effective search space: 707646590 effective search space used: 707646590 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL019W Annotated|10:402813:404861| frame 3; YJL019W/MPS3; Verified; this gene contains 1 exon (682 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJL019W YJL019W SGDID:S0003556, Chr X from 402593-404455 1249 0.0 YJL018W YJL018W SGDID:S0003555, Chr X from 404326-404640 135 3e-32 >YJL019W YJL019W SGDID:S0003556, Chr X from 402593-404455 Length = 620 Score = 1249 bits (3233), Expect = 0.0 Identities = 617/617 (100%), Positives = 617/617 (100%) Query: 1 MNNSNEHRREEAGAANEQMPYNKAVKSAYADVLKDKMNREQEISLRAIKKGIYTDGGETD 60 MNNSNEHRREEAGAANEQMPYNKAVKSAYADVLKDKMNREQEISLRAIKKGIYTDGGETD Sbjct: 1 MNNSNEHRREEAGAANEQMPYNKAVKSAYADVLKDKMNREQEISLRAIKKGIYTDGGETD 60 Query: 61 NYDMDKENDSAYEMFKKNLDFPLDQHNDDDDDDPYIEDNGQETDGYSDEDYTDEADKSFI 120 NYDMDKENDSAYEMFKKNLDFPLDQHNDDDDDDPYIEDNGQETDGYSDEDYTDEADKSFI Sbjct: 61 NYDMDKENDSAYEMFKKNLDFPLDQHNDDDDDDPYIEDNGQETDGYSDEDYTDEADKSFI 120 Query: 121 EDSDSDSYDLESNSDFEENLESSGEAKKLKWRTYIFYGGLFFVFYFFGSFLMTTVKNNDL 180 EDSDSDSYDLESNSDFEENLESSGEAKKLKWRTYIFYGGLFFVFYFFGSFLMTTVKNNDL Sbjct: 121 EDSDSDSYDLESNSDFEENLESSGEAKKLKWRTYIFYGGLFFVFYFFGSFLMTTVKNNDL 180 Query: 181 ESHSSGATSSPGKSFSNLQKQVNHLYSELSKRDEKHSSELDKTVKIIVSQFEKNIKRLLP 240 ESHSSGATSSPGKSFSNLQKQVNHLYSELSKRDEKHSSELDKTVKIIVSQFEKNIKRLLP Sbjct: 181 ESHSSGATSSPGKSFSNLQKQVNHLYSELSKRDEKHSSELDKTVKIIVSQFEKNIKRLLP 240 Query: 241 SNLVNFENDINSLTKQVETISTSMSELQRRNHKFTVENVTQWQDQLVKQLDTHLPQEIPV 300 SNLVNFENDINSLTKQVETISTSMSELQRRNHKFTVENVTQWQDQLVKQLDTHLPQEIPV Sbjct: 241 SNLVNFENDINSLTKQVETISTSMSELQRRNHKFTVENVTQWQDQLVKQLDTHLPQEIPV 300 Query: 301 VINNSSSLLIIPELHNYLSALISDVIESPGIGTAGSAESRWEYDLNRYVKEILSNELQYI 360 VINNSSSLLIIPELHNYLSALISDVIESPGIGTAGSAESRWEYDLNRYVKEILSNELQYI Sbjct: 301 VINNSSSLLIIPELHNYLSALISDVIESPGIGTAGSAESRWEYDLNRYVKEILSNELQYI 360 Query: 361 DKDYFIQEMNRRLQSNKQEIWEEITNRLETQQQQQQQQVQQDYSNVPQQYSSILMKRLIH 420 DKDYFIQEMNRRLQSNKQEIWEEITNRLETQQQQQQQQVQQDYSNVPQQYSSILMKRLIH Sbjct: 361 DKDYFIQEMNRRLQSNKQEIWEEITNRLETQQQQQQQQVQQDYSNVPQQYSSILMKRLIH 420 Query: 421 QIYNSNQHQWEDDLDFATYVQGTKLLNHLTSPTWRQGSGVQPIELLTDSKQSSSTYWQCE 480 QIYNSNQHQWEDDLDFATYVQGTKLLNHLTSPTWRQGSGVQPIELLTDSKQSSSTYWQCE Sbjct: 421 QIYNSNQHQWEDDLDFATYVQGTKLLNHLTSPTWRQGSGVQPIELLTDSKQSSSTYWQCE 480 Query: 481 NEPGCSWAIRFKTPLYLTKISYMHGRFTNNLHIMNSAPRLISLYVKLSQTKEIKALQTLA 540 NEPGCSWAIRFKTPLYLTKISYMHGRFTNNLHIMNSAPRLISLYVKLSQTKEIKALQTLA Sbjct: 481 NEPGCSWAIRFKTPLYLTKISYMHGRFTNNLHIMNSAPRLISLYVKLSQTKEIKALQTLA 540 Query: 541 NQYGFGQHHKRDRNYIKIAKFEYRLTDSRIRQQMYLPPWFIQLKPLVRSIVFQVDENYGN 600 NQYGFGQHHKRDRNYIKIAKFEYRLTDSRIRQQMYLPPWFIQLKPLVRSIVFQVDENYGN Sbjct: 541 NQYGFGQHHKRDRNYIKIAKFEYRLTDSRIRQQMYLPPWFIQLKPLVRSIVFQVDENYGN 600 Query: 601 KKFISLRKFIINGVTPQ 617 KKFISLRKFIINGVTPQ Sbjct: 601 KKFISLRKFIINGVTPQ 617 >YJL018W YJL018W SGDID:S0003555, Chr X from 404326-404640 Length = 104 Score = 135 bits (339), Expect = 3e-32 Identities = 65/65 (100%), Positives = 65/65 (100%) Query: 618 DLQIIENNEFPVLLGDTPEYGVTQNTDEGKRKVLLSKPPYASSSTSTKFHPASNVPSFGQ 677 DLQIIENNEFPVLLGDTPEYGVTQNTDEGKRKVLLSKPPYASSSTSTKFHPASNVPSFGQ Sbjct: 40 DLQIIENNEFPVLLGDTPEYGVTQNTDEGKRKVLLSKPPYASSSTSTKFHPASNVPSFGQ 99 Query: 678 DELDQ 682 DELDQ Sbjct: 100 DELDQ 104 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.313 0.131 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,656,618 Number of Sequences: 6497 Number of extensions: 242027 Number of successful extensions: 3197 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3195 Number of HSP's gapped (non-prelim): 2 length of query: 682 length of database: 2,996,526 effective HSP length: 97 effective length of query: 585 effective length of database: 2,366,317 effective search space: 1384295445 effective search space used: 1384295445 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL016W Annotated|10:405504:407189| frame 3; YJL016W; Uncharacterized; this gene contains 1 exon (561 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJL017W YJL017W SGDID:S0003554, Chr X from 405283-406260 640 0.0 YJL016W YJL016W SGDID:S0003553, Chr X from 406452-406967 343 4e-95 >YJL017W YJL017W SGDID:S0003554, Chr X from 405283-406260 Length = 325 Score = 640 bits (1651), Expect = 0.0 Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MGILDSLKKPVNIKSSLPKFSRSATSINLSSHPVSSRSFLELPPELFSITKPIFKLLQAH 60 MGILDSLKKPVNIKSSLPKFSRSATSINLSSHPVSSRSFLELPPELFSITKPIFKLLQAH Sbjct: 1 MGILDSLKKPVNIKSSLPKFSRSATSINLSSHPVSSRSFLELPPELFSITKPIFKLLQAH 60 Query: 61 ANKIYFQSSDAEAVWNVKDSSGHVFEAESISLLGSHIIITNSSVQVADVAIIDSPSNINQ 120 ANKIYFQSSDAEAVWNVKDSSGHVFEAESISLLGSHIIITNSSVQVADVAIIDSPSNINQ Sbjct: 61 ANKIYFQSSDAEAVWNVKDSSGHVFEAESISLLGSHIIITNSSVQVADVAIIDSPSNINQ 120 Query: 121 CEISSVGEFLQFNNGQLSITCNDFGLLEKFKRLCMISIFEFISIYKALTGTVISSYGLRM 180 CEISSVGEFLQFNNGQLSITCNDFGLLEKFKRLCMISIFEFISIYKALTGTVISSYGLRM Sbjct: 121 CEISSVGEFLQFNNGQLSITCNDFGLLEKFKRLCMISIFEFISIYKALTGTVISSYGLRM 180 Query: 181 SDMHIILNSPFNFKDWCEVYLDGQGWVKVWCHIDKVSKTNNSKSSSDNDAKGKYQIRFYR 240 SDMHIILNSPFNFKDWCEVYLDGQGWVKVWCHIDKVSKTNNSKSSSDNDAKGKYQIRFYR Sbjct: 181 SDMHIILNSPFNFKDWCEVYLDGQGWVKVWCHIDKVSKTNNSKSSSDNDAKGKYQIRFYR 240 Query: 241 DDKSTSSKNCVFFIPDNEYVQDIFFYNINAAEPSKNMNDFFQGLQMIKLVGNVRFCSDTD 300 DDKSTSSKNCVFFIPDNEYVQDIFFYNINAAEPSKNMNDFFQGLQMIKLVGNVRFCSDTD Sbjct: 241 DDKSTSSKNCVFFIPDNEYVQDIFFYNINAAEPSKNMNDFFQGLQMIKLVGNVRFCSDTD 300 Query: 301 FNDVVDSGSIYSSANNGS 318 FNDVVDSGSIYSSANNGS Sbjct: 301 FNDVVDSGSIYSSANNGS 318 >YJL016W YJL016W SGDID:S0003553, Chr X from 406452-406967 Length = 171 Score = 343 bits (880), Expect = 4e-95 Identities = 171/171 (100%), Positives = 171/171 (100%) Query: 391 MIRFIIPLMDCARLYGRPVQFKTERTDINSLMFGLPKLPSVDYFAEEEIAHLMTQEFNPL 450 MIRFIIPLMDCARLYGRPVQFKTERTDINSLMFGLPKLPSVDYFAEEEIAHLMTQEFNPL Sbjct: 1 MIRFIIPLMDCARLYGRPVQFKTERTDINSLMFGLPKLPSVDYFAEEEIAHLMTQEFNPL 60 Query: 451 KEKDTDDTMALTMSRFSSYLQERMTKVSKRNTELNFRTFSDVMGMYNTTRDHSKLNCMSD 510 KEKDTDDTMALTMSRFSSYLQERMTKVSKRNTELNFRTFSDVMGMYNTTRDHSKLNCMSD Sbjct: 61 KEKDTDDTMALTMSRFSSYLQERMTKVSKRNTELNFRTFSDVMGMYNTTRDHSKLNCMSD 120 Query: 511 KDNSVKEFSLSDKSNVSSETTNMMNQLQVNAHEYKSSMCERPIVASTSPIA 561 KDNSVKEFSLSDKSNVSSETTNMMNQLQVNAHEYKSSMCERPIVASTSPIA Sbjct: 121 KDNSVKEFSLSDKSNVSSETTNMMNQLQVNAHEYKSSMCERPIVASTSPIA 171 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.131 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,543,322 Number of Sequences: 6497 Number of extensions: 168196 Number of successful extensions: 974 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 972 Number of HSP's gapped (non-prelim): 2 length of query: 561 length of database: 2,996,526 effective HSP length: 95 effective length of query: 466 effective length of database: 2,379,311 effective search space: 1108758926 effective search space used: 1108758926 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 325 (129.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJR013W Annotated|10:460296:461507| frame 3; YJR013W; Uncharacterized; this gene contains 1 exon (403 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJR013W YJR013W SGDID:S0003774, Chr X from 460368-461285 633 0.0 >YJR013W YJR013W SGDID:S0003774, Chr X from 460368-461285 Length = 305 Score = 633 bits (1632), Expect = 0.0 Identities = 305/305 (100%), Positives = 305/305 (100%) Query: 99 MKLLNQAISRKRALILESIWLLNPMVITISTRGNAESVLCCLIMFTLFFLQKSRYTLAGI 158 MKLLNQAISRKRALILESIWLLNPMVITISTRGNAESVLCCLIMFTLFFLQKSRYTLAGI Sbjct: 1 MKLLNQAISRKRALILESIWLLNPMVITISTRGNAESVLCCLIMFTLFFLQKSRYTLAGI 60 Query: 159 LYGLSIHFKIYPIIYCIPIAIFIYYNKRNQGPRTQLTSLLNIGLSTLTTLLGCGWAMYKI 218 LYGLSIHFKIYPIIYCIPIAIFIYYNKRNQGPRTQLTSLLNIGLSTLTTLLGCGWAMYKI Sbjct: 61 LYGLSIHFKIYPIIYCIPIAIFIYYNKRNQGPRTQLTSLLNIGLSTLTTLLGCGWAMYKI 120 Query: 219 YGYEFLDQAYLYHLYRTDHRHNFSVWNMLLYLDSANKENGESNLSRYAFVPQLLLVLVTG 278 YGYEFLDQAYLYHLYRTDHRHNFSVWNMLLYLDSANKENGESNLSRYAFVPQLLLVLVTG Sbjct: 121 YGYEFLDQAYLYHLYRTDHRHNFSVWNMLLYLDSANKENGESNLSRYAFVPQLLLVLVTG 180 Query: 279 CLEWWNPTFDNLLRVLFVQTFAFVTYNKVCTSQYFVWYLIFLPFYLSRTHIGWKKGLLMA 338 CLEWWNPTFDNLLRVLFVQTFAFVTYNKVCTSQYFVWYLIFLPFYLSRTHIGWKKGLLMA Sbjct: 181 CLEWWNPTFDNLLRVLFVQTFAFVTYNKVCTSQYFVWYLIFLPFYLSRTHIGWKKGLLMA 240 Query: 339 TLWVGTQGIWLSQGYYLEFEGKNVFYPGLFIASVLFFVTNVWLLGQFITDIKIPTQPTVS 398 TLWVGTQGIWLSQGYYLEFEGKNVFYPGLFIASVLFFVTNVWLLGQFITDIKIPTQPTVS Sbjct: 241 TLWVGTQGIWLSQGYYLEFEGKNVFYPGLFIASVLFFVTNVWLLGQFITDIKIPTQPTVS 300 Query: 399 NKKNN 403 NKKNN Sbjct: 301 NKKNN 305 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.330 0.145 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,483,652 Number of Sequences: 6497 Number of extensions: 108599 Number of successful extensions: 290 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 289 Number of HSP's gapped (non-prelim): 1 length of query: 403 length of database: 2,996,526 effective HSP length: 93 effective length of query: 310 effective length of database: 2,392,305 effective search space: 741614550 effective search space used: 741614550 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 324 (129.4 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL012C Annotated|10:413314:411149| frame 4; YJL012C/VTC4; Verified; this gene contains 1 exon (721 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJL012C VTC4 SGDID:S0003549, Chr X from 411145-413091, reverse c... 1237 0.0 YFL004W VTC2 SGDID:S0001890, Chr VI from 131804-134290 303 5e-83 YPL019C VTC3 SGDID:S0005940, Chr XVI from 514507-517014, reverse... 302 1e-82 >YJL012C VTC4 SGDID:S0003549, Chr X from 411145-413091, reverse complement Length = 648 Score = 1237 bits (3201), Expect = 0.0 Identities = 609/609 (100%), Positives = 609/609 (100%) Query: 1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNNGQWTQELETDFLESLEIELDKVY 60 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNNGQWTQELETDFLESLEIELDKVY Sbjct: 1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNNGQWTQELETDFLESLEIELDKVY 60 Query: 61 TFCKVKHSEVFRRVKEVQEQVQHTVRLLDSNNPPTQLDFEILEEELSDIIADVHDLAKFS 120 TFCKVKHSEVFRRVKEVQEQVQHTVRLLDSNNPPTQLDFEILEEELSDIIADVHDLAKFS Sbjct: 61 TFCKVKHSEVFRRVKEVQEQVQHTVRLLDSNNPPTQLDFEILEEELSDIIADVHDLAKFS 120 Query: 121 RLNYTGFQKIIKKHDKKTGFILKPVFQVRLDSKPFFKENYDELVVKISQLYDIARTSGRP 180 RLNYTGFQKIIKKHDKKTGFILKPVFQVRLDSKPFFKENYDELVVKISQLYDIARTSGRP Sbjct: 121 RLNYTGFQKIIKKHDKKTGFILKPVFQVRLDSKPFFKENYDELVVKISQLYDIARTSGRP 180 Query: 181 IKGDSSAGGKQQNFVRQTTKYWVHPDNITELKLIILKHLPVLVFNTNKEFEREDSAITSI 240 IKGDSSAGGKQQNFVRQTTKYWVHPDNITELKLIILKHLPVLVFNTNKEFEREDSAITSI Sbjct: 181 IKGDSSAGGKQQNFVRQTTKYWVHPDNITELKLIILKHLPVLVFNTNKEFEREDSAITSI 240 Query: 241 YFDNENLDLYYGRLRKDEGAEAHRLRWYGGMSTDTIFVERKTHREDWTGEKSVKARFALK 300 YFDNENLDLYYGRLRKDEGAEAHRLRWYGGMSTDTIFVERKTHREDWTGEKSVKARFALK Sbjct: 241 YFDNENLDLYYGRLRKDEGAEAHRLRWYGGMSTDTIFVERKTHREDWTGEKSVKARFALK 300 Query: 301 ERHVNDFLKGKYTVDQVFAKMRKEGKKPMNEIENLEALASEIQYVMLKKKLRPVVRSFYN 360 ERHVNDFLKGKYTVDQVFAKMRKEGKKPMNEIENLEALASEIQYVMLKKKLRPVVRSFYN Sbjct: 301 ERHVNDFLKGKYTVDQVFAKMRKEGKKPMNEIENLEALASEIQYVMLKKKLRPVVRSFYN 360 Query: 361 RTAFQLPGDARVRISLDTELTMVREDNFDGVDRTHKNWRRTDIGVDWPFKQLDDKDICRF 420 RTAFQLPGDARVRISLDTELTMVREDNFDGVDRTHKNWRRTDIGVDWPFKQLDDKDICRF Sbjct: 361 RTAFQLPGDARVRISLDTELTMVREDNFDGVDRTHKNWRRTDIGVDWPFKQLDDKDICRF 420 Query: 421 PYAVLEVKLQTQLGQEPPEWVRELVGSHLVEPVPKFSKFIHGVATLLNDKVDSIPFWLPQ 480 PYAVLEVKLQTQLGQEPPEWVRELVGSHLVEPVPKFSKFIHGVATLLNDKVDSIPFWLPQ Sbjct: 421 PYAVLEVKLQTQLGQEPPEWVRELVGSHLVEPVPKFSKFIHGVATLLNDKVDSIPFWLPQ 480 Query: 481 MDVDIRKPPLPTNIEITRPGRSDNEDNDFDEDDEDDAALVAAMTNAPGNSLDIEESVGYG 540 MDVDIRKPPLPTNIEITRPGRSDNEDNDFDEDDEDDAALVAAMTNAPGNSLDIEESVGYG Sbjct: 481 MDVDIRKPPLPTNIEITRPGRSDNEDNDFDEDDEDDAALVAAMTNAPGNSLDIEESVGYG 540 Query: 541 ATSAPTSNTNHVVESANAAYYQRKIRNAENPISKKYYEIVAFFDHYFNGDQISKIPKGTT 600 ATSAPTSNTNHVVESANAAYYQRKIRNAENPISKKYYEIVAFFDHYFNGDQISKIPKGTT Sbjct: 541 ATSAPTSNTNHVVESANAAYYQRKIRNAENPISKKYYEIVAFFDHYFNGDQISKIPKGTT 600 Query: 601 FDTQIRAPP 609 FDTQIRAPP Sbjct: 601 FDTQIRAPP 609 >YFL004W VTC2 SGDID:S0001890, Chr VI from 131804-134290 Length = 828 Score = 303 bits (777), Expect = 5e-83 Identities = 244/809 (30%), Positives = 390/809 (48%), Gaps = 121/809 (14%) Query: 1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNNG-----QWTQELETDFLESLEIE 55 M FG L+ + + YI+Y+ LK L+++ K+ +W E+ F+E L+ E Sbjct: 1 MLFGVKLANEVYPPWKGSYINYEGLKKFLKEDSVKDGSNDKKARWDDSDESKFVEELDKE 60 Query: 56 LDKVYTFCKVKHSEVFRRVKEVQEQVQHTVRLLDSNNPPTQLDFEILEEELSDIIADVHD 115 L+KVY F K++ + R+ +++Q D+ LD + + L +++++ + Sbjct: 61 LEKVYGFQLKKYNNLMERLSHLEKQT-------DTEAAIKALDADAFQRVLEELLSESTE 113 Query: 116 LAKFSRLNYTGFQKIIKKHDKKTGFI--LKPVFQVRLDSKPFFKENYDELVVKISQLYDI 173 L F RLN+TGF KI+KKHDK +K + +VRL P E Y L+ +IS LY+I Sbjct: 114 LDNFKRLNFTGFAKIVKKHDKLYPKYPSVKSLLEVRLKELPSHSEEYSPLLYRISFLYNI 173 Query: 174 AR----TSGRPIKGDSSAGGKQQNFVR---QTTKYWVHPDNITELKLIILKHLPVLVF-N 225 R T+ P+ S N + ++ K+WVH DN+ E+K IL+HLPVLV+ N Sbjct: 174 LRSNFNTASEPLASASKFSSIVSNDIDMNFRSFKFWVHNDNLMEVKTRILRHLPVLVYAN 233 Query: 226 TNKE-------FERE--------------------------DSAITSIYFDNENLDLYYG 252 E FE + D I ++YFDNE+ +LY Sbjct: 234 VPSENDDLVNRFESDISNNDEIVGSSSSTSSVEHGLGARSFDPLINTLYFDNEHFELYND 293 Query: 253 RLRKDEGAEAHRLRWYGGMS-TDTIFVERKTHREDWTGEKSV--KARFALKERHVNDFL- 308 +L K A RLRW G +S IF+E+KT ED KS + LK++ +N F+ Sbjct: 294 KLLKLNSAPTLRLRWTGQLSDKPDIFLEKKTLIEDEATGKSEFDLTKLQLKQKFINGFIF 353 Query: 309 KGKYTVDQVFAKMRKEGKKPMNEIENLEALASEIQYVMLKKKLRPVVRSFYNRTAFQLPG 368 +G + K KE ++E LE SEIQ ++K +L+PV R+ Y RTAFQ+PG Sbjct: 354 EGDKKFKEQTLKKLKESGTAGRDLERLEEDFSEIQNFIIKNELQPVFRTVYTRTAFQIPG 413 Query: 369 DARVRISLDTELTMVREDNFDGVD--RTHKNWRRTDI--GVDWPFKQLDDKDICRFPYAV 424 D ++R+++D+ + ++ED+FD R W RTDI V P K L + +FPY+V Sbjct: 414 DDKIRVTIDSNIVFIKEDSFDRERPIRDPNTWHRTDIDANVANPLKFLRGGEYAKFPYSV 473 Query: 425 LEVKLQT---------------QLGQEPPEWVRELVGSHLVEPVPKFSKFIHGVATLLND 469 +E+K+++ +L ++ +W+ +L SHLV+ +PKFS F+ GVA+L D Sbjct: 474 MEIKVKSSLDSSMSASSMISNVKLPKKHGQWLNDLTNSHLVKEIPKFSIFVQGVASLYGD 533 Query: 470 --KVDSIPFWLPQMDVDIRKPP----------LPTNIEITRPGRSDNEDNDFDEDDEDDA 517 K+D +PFWLP ++ DIR+ P L EI + ++ E A Sbjct: 534 DEKLDILPFWLPDLETDIRQDPKQAYEEEKKKLLKQKEIQKKIDGMRRLSNLKEPQHQAA 593 Query: 518 ALVAAMTNAPGNSL-DIEESVGYGATSAPTSNTNHVVESANAAYYQRKIRNAENPISKKY 576 V+ N S D+E G++ T H S +K+R + + + Sbjct: 594 VPVSQEENERITSQGDLEAD---GSSDEETEQEPHSKRS-------KKVRRRKPKAT--F 641 Query: 577 YEIVAFFDHYFNG----DQISKIPKGTTFDTQIRAPPGKTICVPVRVEPKVYFATERTYL 632 I+A D G ++ ++P G + G PV VE KV+ A ERT+ Sbjct: 642 LRILAGRDPKLMGVDSEEEEIELPPGVKKPLNLLKNAG-----PVNVEAKVWLANERTFN 696 Query: 633 SWLSISILLGGVSTTLLTYGS------PT-AMIGSIGFFITSLAVLIRTVMVYAKRVVNI 685 WLS++ LL + T Y S PT A + +F ++ + + +Y KRV I Sbjct: 697 RWLSVTSLLSVL--TFSIYNSVKKAEYPTLANYMAYVYFGLTIFCALWSYSIYMKRVDII 754 Query: 686 RLKRAVDYEDKIGPGMVSVFLILSILFSF 714 + + + +GP +VS+ L ++++ +F Sbjct: 755 QQRSGQHLDAPLGPVLVSIVLFVTLVVNF 783 >YPL019C VTC3 SGDID:S0005940, Chr XVI from 514507-517014, reverse complement Length = 835 Score = 302 bits (773), Expect = 1e-82 Identities = 235/815 (28%), Positives = 391/815 (47%), Gaps = 121/815 (14%) Query: 1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNN----GQWTQELETDFLESLEIEL 56 M FG L+ + + YI Y+ LK L++++ + W++ E+DF+E+L+ EL Sbjct: 1 MLFGIKLANDVYPPWKDSYIDYERLKKLLKESVIHDGRSSVDSWSERNESDFVEALDKEL 60 Query: 57 DKVYTFCKVKHSEVFRRVKEVQEQVQHTVRLLDSNNPPTQLDFEILEEELSDIIADVHDL 116 +KVYTF K++ V R++ +++E + ++ N+ E + L + + + L Sbjct: 61 EKVYTFQISKYNAVLRKLDDLEENTKSAEKIQKINS-------EQFKNTLEECLDEAQRL 113 Query: 117 AKFSRLNYTGFQKIIKKHDKKTGFI--LKPVFQVRLDSKPFFK-ENYDELVVKISQLYDI 173 F RLN+TGF KI+KKHDK +K + QVRL PF E Y L+ +IS LY+ Sbjct: 114 DNFDRLNFTGFIKIVKKHDKLHPNYPSVKSLLQVRLKELPFNNSEEYSPLLYRISYLYEF 173 Query: 174 ARTS---GRPIKGDSSAGGKQQNFVR------QTTKYWVHPDNITELKLIILKHLPVLVF 224 R++ + ++ K +F ++ K+WVH DNI E+K IL+HLP LV+ Sbjct: 174 LRSNYDHPNTVSKSLASTSKLSHFSNLEDASFKSYKFWVHDDNIMEVKARILRHLPALVY 233 Query: 225 ---------------------------------------NTNKEFE-----------RED 234 N+N++ E D Sbjct: 234 ASVPNENDDFVDNLESDVRVQPEARLNIGSKSNSLSSDGNSNQDVEIGKSKSVIFPQSYD 293 Query: 235 SAITSIYFDNENLDLYYGRLRKDEGAEAHRLRWYGGM-STDTIFVERKTHREDW-TGEKS 292 IT++YFDN+ DLY RL K GA RLRW G + IF+E++T E+ TG S Sbjct: 294 PTITTLYFDNDFFDLYNNRLLKISGAPTLRLRWIGKLLDKPDIFLEKRTFTENTETGNSS 353 Query: 293 VKA-RFALKERHVNDFL-KGKYTVDQVFAKMRKEGKKPMNEIENLEALASEIQYVMLKKK 350 + R +K + +N+F+ K + +E E+E L IQ ++++K Sbjct: 354 FEEIRLQMKAKFINNFIFKNDPSYKNYLINQLRERGTQKEELEKLSRDFDNIQNFIVEEK 413 Query: 351 LRPVVRSFYNRTAFQLPGDARVRISLDTELTMVREDNFDGVD--RTHKNWRRTDI--GVD 406 L+PV+R+ YNRTAFQ+PGD +R+++D+ + +RED+ D R +NW R DI + Sbjct: 414 LQPVLRATYNRTAFQIPGDQSIRVTIDSNIMYIREDSLDKNRPIRNPENWHRDDIDSNIP 473 Query: 407 WPFKQLDDKDICRFPYAVLEVKLQTQLGQEPP--EWVRELVGSHLVEPVPKFSKFIHGVA 464 P + L + +FPY+V+E+K+ Q + P EW+++L SHLV VPKFS ++ GVA Sbjct: 474 NPLRFLRAGEYSKFPYSVMEIKVINQDNSQMPNYEWIKDLTNSHLVNEVPKFSLYLQGVA 533 Query: 465 TLLNDK---VDSIPFWLPQMDVDIRKPPLPTNIEITRPGRSDNEDNDFDEDDEDDAALVA 521 +L + V+ +PFWLP ++ DIRK P E + + D D+ ++ Sbjct: 534 SLFGEDDKYVNILPFWLPDLETDIRKNPQ----EAYEEEKKTLQKQKSIHDKLDNMRRLS 589 Query: 522 AMTNAPGNSLDIEESVGYGATSAPTSNTNHVV---ESANAAYYQRKIRNAENPISK-KYY 577 ++ G + + + NT HV+ E ++ + ++ + K K + Sbjct: 590 KISVPDGKTTERQ--------GQKDQNTRHVIADLEDHESSDEEGTALPKKSAVKKGKKF 641 Query: 578 EIVAFFDHYFNGDQISK-----IPKGTTFDTQIRAPPGKTICV-------PVRVEPKVYF 625 + A F G IS+ T + + PPG V PV+VE KV+ Sbjct: 642 KTNAAFLKILAGKNISENGNDPYSDDTDSASSFQLPPGVKKPVHLLKNAGPVKVEAKVWL 701 Query: 626 ATERTYLSWLSISILLGGVSTTLLT------YGSPTAMIGSIGFFITSLAVLIRTVMVYA 679 A ERT+ WLS++ LL ++ ++ + ++ + FF+T L + Y Sbjct: 702 ANERTFNRWLSVTTLLSVLTFSIYNSVQKAEFPQLADLLAYVYFFLT-LFCGVWAYRTYL 760 Query: 680 KRVVNIRLKRAVDYEDKIGPGMVSVFLILSILFSF 714 KR+ I+ + + +GP +V+V LI++++ +F Sbjct: 761 KRLTLIKGRSGKHLDAPVGPILVAVVLIVTLVVNF 795 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,604,094 Number of Sequences: 6497 Number of extensions: 221506 Number of successful extensions: 1487 Number of sequences better than 1.0e-30: 3 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 1465 Number of HSP's gapped (non-prelim): 8 length of query: 721 length of database: 2,996,526 effective HSP length: 98 effective length of query: 623 effective length of database: 2,359,820 effective search space: 1470167860 effective search space used: 1470167860 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL160C Annotated|10:118820:117957| frame 6; YJL160C; Uncharacterized; this gene contains 1 exon (287 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJL160C YJL160C SGDID:S0003696, Chr X from 118278-118820, revers... 333 1e-92 YKL164C PIR1 SGDID:S0001647, Chr XI from 141796-142821, reverse ... 289 3e-79 YKL163W PIR3 SGDID:S0001646, Chr XI from 144403-145380 252 4e-68 YJL158C CIS3 SGDID:S0003694, Chr X from 121962-122645, reverse c... 216 4e-57 YJL159W HSP150 SGDID:S0003695, Chr X from 120444-121376 132 5e-32 >YJL160C YJL160C SGDID:S0003696, Chr X from 118278-118820, reverse complement Length = 180 Score = 333 bits (855), Expect = 1e-92 Identities = 174/178 (97%), Positives = 175/178 (98%) Query: 1 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVTESKV 60 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVTESKV Sbjct: 1 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVTESKV 60 Query: 61 KRNVISQINDGQVQVTTQKLPHPVSQIGDGQIQVTTQKVPPVVSHIVSQIGDGQLQITTA 120 KRNVISQINDGQVQVTTQKLPHPVSQIGDGQIQVTTQKVPPVVSHIVSQIGDGQLQITTA Sbjct: 61 KRNVISQINDGQVQVTTQKLPHPVSQIGDGQIQVTTQKVPPVVSHIVSQIGDGQLQITTA 120 Query: 121 KNVVTKSTIAVPSKTVTATATSTATAVSQIHDGQVQVTISSASSSSVLSKSKLEPTKK 178 KNVVTKSTIAVPSKTVTATATSTATAVSQIHDGQVQVTISSASSSSVLSKSKL K+ Sbjct: 121 KNVVTKSTIAVPSKTVTATATSTATAVSQIHDGQVQVTISSASSSSVLSKSKLRANKE 178 >YKL164C PIR1 SGDID:S0001647, Chr XI from 141796-142821, reverse complement Length = 341 Score = 289 bits (740), Expect = 3e-79 Identities = 166/341 (48%), Positives = 204/341 (59%), Gaps = 54/341 (15%) Query: 1 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVT-ESK 59 M YKK+ +AS L + +L AYAP +PW+TLTPS+ GG T+Y ++FG+AV P T SK Sbjct: 1 MQYKKSLVASALVATSLAAYAPKDPWSTLTPSATYKGGITDYSSTFGIAVEPIATTASSK 60 Query: 60 VKRNV-ISQINDGQVQVTTQKLPHPVSQIGDGQIQVTTQKVPPVVSHI------------ 106 KR ISQI DGQ+Q TT+ VSQIGDGQIQ TT+ VS I Sbjct: 61 AKRAAAISQIGDGQIQATTKTTAAAVSQIGDGQIQATTKTKAAAVSQIGDGQIQATTKTT 120 Query: 107 --------VSQIGDGQLQITTAKNVV-------------TKSTIAVPSKT----VTATAT 141 VSQIGDGQ+Q TT TK+T A S+ + AT Sbjct: 121 SAKTTAAAVSQIGDGQIQATTKTKAAAVSQIGDGQIQATTKTTAAAVSQIGDGQIQATTK 180 Query: 142 STATAVSQIHDGQVQVTISSASS-----------SSVLSKSKLEPTKKP----NNEKVIK 186 +TA AVSQI DGQ+Q T ++ + ++ L+ + + P+ P N + Sbjct: 181 TTAAAVSQIGDGQIQATTNTTVAPVSQITDGQIQATTLTSATIIPSPAPAPITNGTDPVT 240 Query: 187 VQACKSSGTLAITLQGGVLIDSSGRIGSIVANRQFQFDGPPPQAGAIYAGGWSITKHGTL 246 + CKSSGTL + L+GG+L D GRIGSIVANRQFQFDGPPPQAGAIYA GWSIT G L Sbjct: 241 AETCKSSGTLEMNLKGGILTDGKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPEGNL 300 Query: 247 AIGDNDVFYQCLSGTFYNLYDQSIGGQCNPVHLQTVGLVDC 287 AIGD D FYQCLSG FYNLYD+ IG QCN VHLQ + L++C Sbjct: 301 AIGDQDTFYQCLSGNFYNLYDEHIGTQCNAVHLQAIDLLNC 341 >YKL163W PIR3 SGDID:S0001646, Chr XI from 144403-145380 Length = 325 Score = 252 bits (644), Expect = 4e-68 Identities = 148/331 (44%), Positives = 191/331 (57%), Gaps = 50/331 (15%) Query: 1 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPF-----TV 55 M YKK + S L++ +L AYAP +PW+TLTPS+ GG T+Y +SFG+A+ +V Sbjct: 1 MQYKKPLVVSALAATSLAAYAPKDPWSTLTPSATYKGGITDYSSSFGIAIEAVATSASSV 60 Query: 56 TESKVKRNVISQINDGQVQVTT-------QKLPHPVSQIGDGQIQVTTQKVPPVVSHIVS 108 SK KR SQI DGQVQ T + VSQI DGQ+Q + VS Sbjct: 61 ASSKAKR-AASQIGDGQVQAATTTAAVSKKSTAAAVSQITDGQVQAAKS-----TAAAVS 114 Query: 109 QIGDGQLQ-----------ITTAKNVVTKSTIAVPSKTVTA---TATSTATAVSQIHDGQ 154 QI DGQ+Q IT + KST A S+ A STA A SQI DGQ Sbjct: 115 QITDGQVQAAKSTAAAVSQITDGQVQAAKSTAAAVSQITDGQVQAAKSTAAAASQISDGQ 174 Query: 155 VQVTISSASSSSVLSKSKLEPTKKPNNEKVIK------------------VQACKSSGTL 196 VQ T S+ +++S ++ +++ +K + + V +C ++ TL Sbjct: 175 VQATTSTKAAASQITDGQIQASKTTSGASQVSDGQVQATAEVKDANDPVDVVSCNNNSTL 234 Query: 197 AITLQGGVLIDSSGRIGSIVANRQFQFDGPPPQAGAIYAGGWSITKHGTLAIGDNDVFYQ 256 +++L G+L D GRIGSIVANRQFQFDGPPPQAGAIYA GWSIT G LA+GD D FYQ Sbjct: 235 SMSLSKGILTDRKGRIGSIVANRQFQFDGPPPQAGAIYAAGWSITPEGNLALGDQDTFYQ 294 Query: 257 CLSGTFYNLYDQSIGGQCNPVHLQTVGLVDC 287 CLSG FYNLYD+ IG QC+ V+LQ + L+DC Sbjct: 295 CLSGDFYNLYDKHIGSQCHEVYLQAIDLIDC 325 >YJL158C CIS3 SGDID:S0003694, Chr X from 121962-122645, reverse complement Length = 227 Score = 216 bits (549), Expect = 4e-57 Identities = 127/291 (43%), Positives = 165/291 (56%), Gaps = 68/291 (23%) Query: 1 MHYKKAFLASLLSSIALTA----YAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVT 56 M +K LA+ +++++ TA Y P EPW+TLTP+ + G EY T+FG+AV +T Sbjct: 1 MQFKNVALAASVAALSATASAEGYTPGEPWSTLTPTGSISCGAAEYTTTFGIAVQ--AIT 58 Query: 57 ESKVKRNVISQINDGQVQVTTQKLPHPVSQIGDGQIQVTTQKVPPVVSHIVSQIGDGQLQ 116 SK KR+VIS QIGDGQ+Q Sbjct: 59 SSKAKRDVIS------------------------------------------QIGDGQVQ 76 Query: 117 ITTAKNVVTKSTIAVPSKTVTATATSTATAVSQIHDGQVQVTISSASSSSVLSKSKLEPT 176 T+A +T AT T+T T+ +I T ++A+SSS + S Sbjct: 77 ATSA------ATAQATDSQAQATTTATPTSSEKI-SSSASKTSTNATSSSCATPS----- 124 Query: 177 KKPNNEKVIKVQACKSSGTLAITLQGGVLIDSSGRIGSIVANRQFQFDGPPPQAGAIYAG 236 +K +CK+SGTL +TL+ GVL D+ GRIGSIVANRQFQFDGPPPQAGAIYA Sbjct: 125 --------LKDSSCKNSGTLELTLKDGVLTDAKGRIGSIVANRQFQFDGPPPQAGAIYAA 176 Query: 237 GWSITKHGTLAIGDNDVFYQCLSGTFYNLYDQSIGGQCNPVHLQTVGLVDC 287 GWSIT+ G LA+GD+DVFYQCLSG FYNLYDQ++ QC+ +HL+ V LVDC Sbjct: 177 GWSITEDGYLALGDSDVFYQCLSGNFYNLYDQNVAEQCSAIHLEAVSLVDC 227 >YJL159W HSP150 SGDID:S0003695, Chr X from 120444-121376 Length = 310 Score = 132 bits (333), Expect = 5e-32 Identities = 93/227 (40%), Positives = 121/227 (53%), Gaps = 42/227 (18%) Query: 1 MHYKKAFLASLLSSIALTAYAPPEPWATLTPSSKMDGGTTEYRTSFGLAVIPFTVT---- 56 M YKK +AS L++ L AYAP EPW+TLTP++ GG T+Y ++FG+AV P + T Sbjct: 1 MQYKKTLVASALAATTLAAYAPSEPWSTLTPTATYSGGVTDYASTFGIAVQPISTTSSAS 60 Query: 57 ------ESKVKRNVISQINDGQVQ-------VTTQKLPHPVSQIGDGQIQVTTQKVPPVV 103 SK KR SQI DGQVQ V+T+ VSQIGDGQIQ TT+ V Sbjct: 61 SAATTASSKAKR-AASQIGDGQVQAATTTASVSTKSTAAAVSQIGDGQIQATTKTTAAAV 119 Query: 104 SH------------------IVSQIGDGQLQITTAKNVVTKSTIAVPSK----TVTATAT 141 S VSQI DGQ+Q TT + KST A S+ V AT Sbjct: 120 SRDGQIQATTKTTSAKTTAAAVSQISDGQIQATTT-TLAPKSTAAAVSQIGDGQVQATTK 178 Query: 142 STATAVSQIHDGQVQVTI-SSASSSSVLSKSKLEPTKKPNNEKVIKV 187 +TA AVSQI DGQVQ T ++A++ S + +++ T K V ++ Sbjct: 179 TTAAAVSQIGDGQVQATTKTTAAAVSQIGDGQVQATTKTTAAAVSQI 225 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.313 0.129 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,547,048 Number of Sequences: 6497 Number of extensions: 59939 Number of successful extensions: 573 Number of sequences better than 1.0e-30: 5 Number of HSP's better than 0.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 466 Number of HSP's gapped (non-prelim): 11 length of query: 287 length of database: 2,996,526 effective HSP length: 89 effective length of query: 198 effective length of database: 2,418,293 effective search space: 478822014 effective search space used: 478822014 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YJL178C Annotated|10:90095:89280| frame 6; YJL178C/ATG27; Verified; this gene contains 1 exon (271 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YJL178C YJL178C SGDID:S0003714, Chr X from 89280-89870, reverse ... 400 e-113 >YJL178C YJL178C SGDID:S0003714, Chr X from 89280-89870, reverse complement Length = 196 Score = 400 bits (1029), Expect = e-113 Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 76 MLCGLTDVILPGKDAITTQIIDFDKNIGFNVEETESALTLTLKGATWGANSFDAKLEFQC 135 MLCGLTDVILPGKDAITTQIIDFDKNIGFNVEETESALTLTLKGATWGANSFDAKLEFQC Sbjct: 1 MLCGLTDVILPGKDAITTQIIDFDKNIGFNVEETESALTLTLKGATWGANSFDAKLEFQC 60 Query: 136 NDNMKQDELTSHTWADKSIQLTLKGPSGCLKSKDDDKKNGDGDNGKDGDSEGKKPAKKAG 195 NDNMKQDELTSHTWADKSIQLTLKGPSGCLKSKDDDKKNGDGDNGKDGDSEGKKPAKKAG Sbjct: 61 NDNMKQDELTSHTWADKSIQLTLKGPSGCLKSKDDDKKNGDGDNGKDGDSEGKKPAKKAG 120 Query: 196 GTSWFTWLFLYALLFTLIYLMVVSFLNTRGGSFQDFRAEFIQRSTQFLTSLPEFCKEVVS 255 GTSWFTWLFLYALLFTLIYLMVVSFLNTRGGSFQDFRAEFIQRSTQFLTSLPEFCKEVVS Sbjct: 121 GTSWFTWLFLYALLFTLIYLMVVSFLNTRGGSFQDFRAEFIQRSTQFLTSLPEFCKEVVS 180 Query: 256 RILGRSTAQRGGYSAV 271 RILGRSTAQRGGYSAV Sbjct: 181 RILGRSTAQRGGYSAV 196 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.134 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,714,390 Number of Sequences: 6497 Number of extensions: 78671 Number of successful extensions: 343 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 342 Number of HSP's gapped (non-prelim): 1 length of query: 271 length of database: 2,996,526 effective HSP length: 89 effective length of query: 182 effective length of database: 2,418,293 effective search space: 440129326 effective search space used: 440129326 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKR091W Annotated|11:611167:611907| frame 1; YKR091W/SRL3; Verified; this gene contains 1 exon (246 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKR091W SRL3 SGDID:S0001799, Chr XI from 611441-611899 301 8e-83 >YKR091W SRL3 SGDID:S0001799, Chr XI from 611441-611899 Length = 152 Score = 301 bits (770), Expect = 8e-83 Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 95 MFPSPTPPLVSPTAVIEEENDDSVREFSRTLKSRLNCAMVKLSKEHEQVALIPPPPTEKI 154 MFPSPTPPLVSPTAVIEEENDDSVREFSRTLKSRLNCAMVKLSKEHEQVALIPPPPTEKI Sbjct: 1 MFPSPTPPLVSPTAVIEEENDDSVREFSRTLKSRLNCAMVKLSKEHEQVALIPPPPTEKI 60 Query: 155 RKGSYSNKFAAKHRRCHSLDESKKFLSSLEDSSAHAAFLKAISSKHAKSNRVDNVNVSPL 214 RKGSYSNKFAAKHRRCHSLDESKKFLSSLEDSSAHAAFLKAISSKHAKSNRVDNVNVSPL Sbjct: 61 RKGSYSNKFAAKHRRCHSLDESKKFLSSLEDSSAHAAFLKAISSKHAKSNRVDNVNVSPL 120 Query: 215 RWSSHRRTQSTQENSLQEVVAIDTLLKMSSSD 246 RWSSHRRTQSTQENSLQEVVAIDTLLKMSSSD Sbjct: 121 RWSSHRRTQSTQENSLQEVVAIDTLLKMSSSD 152 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.309 0.124 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,621,203 Number of Sequences: 6497 Number of extensions: 73498 Number of successful extensions: 306 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 305 Number of HSP's gapped (non-prelim): 1 length of query: 246 length of database: 2,996,526 effective HSP length: 88 effective length of query: 158 effective length of database: 2,424,790 effective search space: 383116820 effective search space used: 383116820 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKL207W Annotated|11:48108:48956| frame 3; YKL207W; Uncharacterized; this gene contains 1 exon (282 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKL207W YKL207W SGDID:S0001690, Chr XI from 48108-48890 488 e-139 >YKL207W YKL207W SGDID:S0001690, Chr XI from 48108-48890 Length = 260 Score = 488 bits (1256), Expect = e-139 Identities = 241/243 (99%), Positives = 242/243 (99%) Query: 1 MTINQHLQQLLFNRIDKTTSSIQQARAPQMLLDDQLKYWVLLPISIVMVLTGVLKQYIMT 60 MTINQHLQQLLFNRIDKTTSSIQQARAPQMLLDDQLKYWVLLPISIVMVLTGVLKQYIMT Sbjct: 1 MTINQHLQQLLFNRIDKTTSSIQQARAPQMLLDDQLKYWVLLPISIVMVLTGVLKQYIMT 60 Query: 61 LITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKA 120 LITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKA Sbjct: 61 LITGSSANEAQPRVKLTEWQYLQWAQLLIGNGGNLSSDAFAAKKEFLVKDLTEERHLAKA 120 Query: 121 KQQDGSQAGEVPNPFNDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFP 180 KQQDGSQAGEVPNPFNDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFP Sbjct: 121 KQQDGSQAGEVPNPFNDPSMSNAMMNMAKGNMASFIPQTIIMWWVNHFFAGFILMQLPFP 180 Query: 181 LTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLIGLNDQDMGIQAGIGGPQ 240 LTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLIGLNDQDMGIQAGIGGPQ Sbjct: 181 LTAKFKEMLQTGIICQDLDVRWVSSISWYFISVLGLNPVYNLIGLNDQDMGIQAGIGGPQ 240 Query: 241 GPQ 243 P+ Sbjct: 241 APK 243 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.321 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,630,923 Number of Sequences: 6497 Number of extensions: 67129 Number of successful extensions: 158 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157 Number of HSP's gapped (non-prelim): 1 length of query: 282 length of database: 2,996,526 effective HSP length: 89 effective length of query: 193 effective length of database: 2,418,293 effective search space: 466730549 effective search space used: 466730549 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKL033W-A Annotated|11:374148:374858| frame 3; YKL033W-A; Uncharacterized; this gene contains 1 exon (236 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done ***** No hits found ****** Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.318 0.140 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,494,796 Number of Sequences: 6497 Number of extensions: 65845 Number of successful extensions: 144 Number of sequences better than 1.0e-30: 0 Number of HSP's better than 0.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144 Number of HSP's gapped (non-prelim): 0 length of query: 236 length of database: 2,996,526 effective HSP length: 88 effective length of query: 148 effective length of database: 2,424,790 effective search space: 358868920 effective search space used: 358868920 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKR056W Annotated|11:549090:551009| frame 3; YKR056W/TRM2; Verified; this gene contains 1 exon (639 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKR056W TRM2 SGDID:S0001764, Chr XI from 549085-550938 1166 0.0 >YKR056W TRM2 SGDID:S0001764, Chr XI from 549085-550938 Length = 617 Score = 1166 bits (3017), Expect = 0.0 Identities = 581/581 (100%), Positives = 581/581 (100%) Query: 1 MYEQFEFSFFFFENSDNKVKYKAHLISSIKRWSIITCMRCFWTVQKSIFKARFFACRNFV 60 MYEQFEFSFFFFENSDNKVKYKAHLISSIKRWSIITCMRCFWTVQKSIFKARFFACRNFV Sbjct: 1 MYEQFEFSFFFFENSDNKVKYKAHLISSIKRWSIITCMRCFWTVQKSIFKARFFACRNFV 60 Query: 61 KKHNYKLISTMTGSTEMVPPTMKHTVDNKRLSSPLTDSGNRRTKKPKLRKYKAKKVETTS 120 KKHNYKLISTMTGSTEMVPPTMKHTVDNKRLSSPLTDSGNRRTKKPKLRKYKAKKVETTS Sbjct: 61 KKHNYKLISTMTGSTEMVPPTMKHTVDNKRLSSPLTDSGNRRTKKPKLRKYKAKKVETTS 120 Query: 121 PMGVLEFEVNDLLKSQNLSREQVLNDVTSILNDKSSTDGPIVLQYHREVKNVKVLEITSN 180 PMGVLEFEVNDLLKSQNLSREQVLNDVTSILNDKSSTDGPIVLQYHREVKNVKVLEITSN Sbjct: 121 PMGVLEFEVNDLLKSQNLSREQVLNDVTSILNDKSSTDGPIVLQYHREVKNVKVLEITSN 180 Query: 181 GNGLALIDNPVETEKKQVVIIPFGLPGDVVNIKVFKTHPYYVESDLLDVVEKSPMRRDDL 240 GNGLALIDNPVETEKKQVVIIPFGLPGDVVNIKVFKTHPYYVESDLLDVVEKSPMRRDDL Sbjct: 181 GNGLALIDNPVETEKKQVVIIPFGLPGDVVNIKVFKTHPYYVESDLLDVVEKSPMRRDDL 240 Query: 241 IRDKYFGKSSGSQLEFLTYDDQLELKRKTIMNAYKFFAPRLVAEKLLPPFDTTVASPLQF 300 IRDKYFGKSSGSQLEFLTYDDQLELKRKTIMNAYKFFAPRLVAEKLLPPFDTTVASPLQF Sbjct: 241 IRDKYFGKSSGSQLEFLTYDDQLELKRKTIMNAYKFFAPRLVAEKLLPPFDTTVASPLQF 300 Query: 301 GYRTKITPHFDMPKRKQKELSVRPPLGFGQKGRPQWRKDTLDIGGHGSILDIDECVLATE 360 GYRTKITPHFDMPKRKQKELSVRPPLGFGQKGRPQWRKDTLDIGGHGSILDIDECVLATE Sbjct: 301 GYRTKITPHFDMPKRKQKELSVRPPLGFGQKGRPQWRKDTLDIGGHGSILDIDECVLATE 360 Query: 361 VLNKGLTNERRKFEQEFKNYKKGATILLRENTTILDPSKPTLEQLTEEASRDENGDISYV 420 VLNKGLTNERRKFEQEFKNYKKGATILLRENTTILDPSKPTLEQLTEEASRDENGDISYV Sbjct: 361 VLNKGLTNERRKFEQEFKNYKKGATILLRENTTILDPSKPTLEQLTEEASRDENGDISYV 420 Query: 421 EVEDKKNNVRLAKTCVTNPRQIVTEYVDGYTFNFSAGEFFQNNNSILPIVTKYVRDNLQA 480 EVEDKKNNVRLAKTCVTNPRQIVTEYVDGYTFNFSAGEFFQNNNSILPIVTKYVRDNLQA Sbjct: 421 EVEDKKNNVRLAKTCVTNPRQIVTEYVDGYTFNFSAGEFFQNNNSILPIVTKYVRDNLQA 480 Query: 481 PAKGDDNKTKFLVDAYCGSGLFSICSSKGVDKVIGVEISADSVSFAEKNAKANGVENCRF 540 PAKGDDNKTKFLVDAYCGSGLFSICSSKGVDKVIGVEISADSVSFAEKNAKANGVENCRF Sbjct: 481 PAKGDDNKTKFLVDAYCGSGLFSICSSKGVDKVIGVEISADSVSFAEKNAKANGVENCRF 540 Query: 541 IVGKAEKLFESIDTPSENTSVILDPPRKGCDELFLKQLAAY 581 IVGKAEKLFESIDTPSENTSVILDPPRKGCDELFLKQLAAY Sbjct: 541 IVGKAEKLFESIDTPSENTSVILDPPRKGCDELFLKQLAAY 581 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.318 0.135 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,135,948 Number of Sequences: 6497 Number of extensions: 194978 Number of successful extensions: 603 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 602 Number of HSP's gapped (non-prelim): 1 length of query: 639 length of database: 2,996,526 effective HSP length: 97 effective length of query: 542 effective length of database: 2,366,317 effective search space: 1282543814 effective search space used: 1282543814 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKR087C Annotated|11:603874:602837| frame 4; YKR087C/OMA1; Verified; this gene contains 1 exon (345 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKR087C YKR087C SGDID:S0001795, Chr XI from 602831-603775, rever... 636 0.0 >YKR087C YKR087C SGDID:S0001795, Chr XI from 602831-603775, reverse complement Length = 314 Score = 636 bits (1641), Expect = 0.0 Identities = 312/313 (99%), Positives = 313/313 (100%) Query: 33 YRYDNGPSYRRFNNGEYSQKSSFKSILLDKSSRKYLALLFGGCSLFYYTHLDKAPVSDRS 92 +RYDNGPSYRRFNNGEYSQKSSFKSILLDKSSRKYLALLFGGCSLFYYTHLDKAPVSDRS Sbjct: 2 FRYDNGPSYRRFNNGEYSQKSSFKSILLDKSSRKYLALLFGGCSLFYYTHLDKAPVSDRS 61 Query: 93 RFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKIENIFMKIVEAAYKDPSVDNS 152 RFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKIENIFMKIVEAAYKDPSVDNS Sbjct: 62 RFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSIKIENIFMKIVEAAYKDPSVDNS 121 Query: 153 LLDGIKWEIHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQLARH 212 LLDGIKWEIHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQLARH Sbjct: 122 LLDGIKWEIHVVNDPTASPNAFVLPGGKVFIFSSILPICANDDGIATVLAHEFAHQLARH 181 Query: 213 TAENLSKAPIYSLLGLVLYTVTGAHAINNILLDGFLRMPASRQMETEADYIGLMIMSRAC 272 TAENLSKAPIYSLLGLVLYTVTGAHAINNILLDGFLRMPASRQMETEADYIGLMIMSRAC Sbjct: 182 TAENLSKAPIYSLLGLVLYTVTGAHAINNILLDGFLRMPASRQMETEADYIGLMIMSRAC 241 Query: 273 FQPQESIKVWERMANFEKQMNRGGVVNMEFLSTHPASTRRIENMSKWLPKANEIYEQSDC 332 FQPQESIKVWERMANFEKQMNRGGVVNMEFLSTHPASTRRIENMSKWLPKANEIYEQSDC Sbjct: 242 FQPQESIKVWERMANFEKQMNRGGVVNMEFLSTHPASTRRIENMSKWLPKANEIYEQSDC 301 Query: 333 SSMGNYYKSFFSM 345 SSMGNYYKSFFSM Sbjct: 302 SSMGNYYKSFFSM 314 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.322 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,107,481 Number of Sequences: 6497 Number of extensions: 89018 Number of successful extensions: 192 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 191 Number of HSP's gapped (non-prelim): 1 length of query: 345 length of database: 2,996,526 effective HSP length: 91 effective length of query: 254 effective length of database: 2,405,299 effective search space: 610945946 effective search space used: 610945946 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 323 (129.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKR100C Annotated|11:639606:638539| frame 5; YKR100C; Uncharacterized; this gene contains 1 exon (355 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKR100C YKR100C SGDID:S0001808, Chr XI from 638872-639597, rever... 468 e-133 >YKR100C YKR100C SGDID:S0001808, Chr XI from 638872-639597, reverse complement Length = 241 Score = 468 bits (1205), Expect = e-133 Identities = 233/233 (100%), Positives = 233/233 (100%) Query: 1 MTASTSVAVGCAVGIPVGVGIIIAVCFWFNLQKRYKREEQDDRELERAIYDESGFVSFDN 60 MTASTSVAVGCAVGIPVGVGIIIAVCFWFNLQKRYKREEQDDRELERAIYDESGFVSFDN Sbjct: 1 MTASTSVAVGCAVGIPVGVGIIIAVCFWFNLQKRYKREEQDDRELERAIYDESGFVSFDN 60 Query: 61 FGPLRDSKDEAALASSELKNPDHTSGSSEGSAHPEEKDGKSRDQEKPLGKKNSKYYVPAY 120 FGPLRDSKDEAALASSELKNPDHTSGSSEGSAHPEEKDGKSRDQEKPLGKKNSKYYVPAY Sbjct: 61 FGPLRDSKDEAALASSELKNPDHTSGSSEGSAHPEEKDGKSRDQEKPLGKKNSKYYVPAY 120 Query: 121 RRKINLLQVRNNNYGNNARQKSVVDLPSINNSSNVSLSSSQRHITKRQISVYDQMVPVIS 180 RRKINLLQVRNNNYGNNARQKSVVDLPSINNSSNVSLSSSQRHITKRQISVYDQMVPVIS Sbjct: 121 RRKINLLQVRNNNYGNNARQKSVVDLPSINNSSNVSLSSSQRHITKRQISVYDQMVPVIS 180 Query: 181 DEGPNFFADPSSDTNTSNDQNKASMIELKHNTRQSSNENLIRNLQNQDFGSYY 233 DEGPNFFADPSSDTNTSNDQNKASMIELKHNTRQSSNENLIRNLQNQDFGSYY Sbjct: 181 DEGPNFFADPSSDTNTSNDQNKASMIELKHNTRQSSNENLIRNLQNQDFGSYY 233 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.309 0.127 0.348 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,385,116 Number of Sequences: 6497 Number of extensions: 122548 Number of successful extensions: 777 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 776 Number of HSP's gapped (non-prelim): 1 length of query: 355 length of database: 2,996,526 effective HSP length: 92 effective length of query: 263 effective length of database: 2,398,802 effective search space: 630884926 effective search space used: 630884926 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 323 (129.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKL203C Annotated|11:63360:55936| frame 5; YKL203C/TOR2; Verified; this gene contains 1 exon (2474 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKL203C TOR2 SGDID:S0001686, Chr XI from 55935-63356, reverse co... 4891 0.0 YJR066W TOR1 SGDID:S0003827, Chr X from 559108-566520 3307 0.0 YBL088C TEL1 SGDID:S0000184, Chr II from 51013-59376, reverse co... 183 3e-46 YBR136W MEC1 SGDID:S0000340, Chr II from 505626-512732 154 1e-37 >YKL203C TOR2 SGDID:S0001686, Chr XI from 55935-63356, reverse complement Length = 2473 Score = 4891 bits (12686), Expect = 0.0 Identities = 2473/2474 (99%), Positives = 2473/2474 (99%), Gaps = 1/2474 (0%) Query: 1 MNKYINKYTTPPNLLSLRQRAEGKHRTRKKLTHKSHSHDDEMSTTSNTDSNHNGPNDSGR 60 MNKYINKYTTPPNLLSLRQRAEGKHRTRKKLTHKSHSHDDEMSTTSNTDSNHNGPNDSGR Sbjct: 1 MNKYINKYTTPPNLLSLRQRAEGKHRTRKKLTHKSHSHDDEMSTTSNTDSNHNGPNDSGR 60 Query: 61 VITGSAGHIGKISFVDSELDTTFSTLNLIFDKLKSDVPQERASGANELSTTLTSLAREVS 120 VITGSAGHIGKISFVDSELDTTFSTLNLIFDKLKSDVPQERASGANELSTTLTSLAREVS Sbjct: 61 VITGSAGHIGKISFVDSELDTTFSTLNLIFDKLKSDVPQERASGANELSTTLTSLAREVS 120 Query: 121 AEQFQRFSNSLNNKIFELIHGFTSSEKIGGILAVDTLISFYLSTEELPNQTSRLANYLRV 180 AEQFQRFSNSLNNKIFELIHGFTSSEKIGGILAVDTLISFYLSTEELPNQTSRLANYLRV Sbjct: 121 AEQFQRFSNSLNNKIFELIHGFTSSEKIGGILAVDTLISFYLSTEELPNQTSRLANYLRV 180 Query: 181 LIPSSDIEVMRLAANTLGRLTVPGGTLTSDFVEFEVRTCIDWLTLTADNNSSSSKLEYRR 240 LIPSSDIEVMRLAANTLGRLTVPGGTLTSDFVEFEVRTCIDWLTLTADNNSSSSKLEYRR Sbjct: 181 LIPSSDIEVMRLAANTLGRLTVPGGTLTSDFVEFEVRTCIDWLTLTADNNSSSSKLEYRR 240 Query: 241 HAALLIIKALADNSPYLLYPYVNSILDNIWVPLRDAKLIIRLDAAVALGKCLTIIQDRDP 300 HAALLIIKALADNSPYLLYPYVNSILDNIWVPLRDAKLIIRLDAAVALGKCLTIIQDRDP Sbjct: 241 HAALLIIKALADNSPYLLYPYVNSILDNIWVPLRDAKLIIRLDAAVALGKCLTIIQDRDP 300 Query: 301 ALGKQWFQRLFQGCTHGLSLNTNDSVHATLLVFRELLSLKAPYLRDKYDDIYKSTMKYKE 360 ALGKQWFQRLFQGCTHGLSLNTNDSVHATLLVFRELLSLKAPYLRDKYDDIYKSTMKYKE Sbjct: 301 ALGKQWFQRLFQGCTHGLSLNTNDSVHATLLVFRELLSLKAPYLRDKYDDIYKSTMKYKE 360 Query: 361 YKFDVIRREVYAILPLLAAFDPAIFTKKYLDRIMVHYLRYLKNIDMNAANNSDKPFILVS 420 YKFDVIRREVYAILPLLAAFDPAIFTKKYLDRIMVHYLRYLKNIDMNAANNSDKPFILVS Sbjct: 361 YKFDVIRREVYAILPLLAAFDPAIFTKKYLDRIMVHYLRYLKNIDMNAANNSDKPFILVS 420 Query: 421 IGDIAFEVGSSISPYMTLILDNIREGLRTKFKVRKQFEKDLFYCIGKLACALGPAFAKHL 480 IGDIAFEVGSSISPYMTLILDNIREGLRTKFKVRKQFEKDLFYCIGKLACALGPAFAKHL Sbjct: 421 IGDIAFEVGSSISPYMTLILDNIREGLRTKFKVRKQFEKDLFYCIGKLACALGPAFAKHL 480 Query: 481 NKDLLNLMLNCPMSDHMQETLMILNEKIPSLESTVNSRILNLLSISLSGEKFIQSNQYDF 540 NKDLLNLMLNCPMSDHMQETLMILNEKIPSLESTVNSRILNLLSISLSGEKFIQSNQYDF Sbjct: 481 NKDLLNLMLNCPMSDHMQETLMILNEKIPSLESTVNSRILNLLSISLSGEKFIQSNQYDF 540 Query: 541 NNQFSIEKARKSRNQSFMKKTGESNDDITDAQILIQCFKMLQLIHHQYSLTEFVRLITIS 600 NNQFSIEKARKSRNQSFMKKTGESNDDITDAQILIQCFKMLQLIHHQYSLTEFVRLITIS Sbjct: 541 NNQFSIEKARKSRNQSFMKKTGESNDDITDAQILIQCFKMLQLIHHQYSLTEFVRLITIS 600 Query: 601 YIEHEDSSVRKLAALTSCDLFIKDDICKQTSVHALHSVSEVLSKLLMIAITDPVAEIRLE 660 YIEHEDSSVRKLAALTSCDLFIKDDICKQTSVHALHSVSEVLSKLLMIAITDPVAEIRLE Sbjct: 601 YIEHEDSSVRKLAALTSCDLFIKDDICKQTSVHALHSVSEVLSKLLMIAITDPVAEIRLE 660 Query: 661 ILQHLGSNFDPQLAQPDNLRLLFMALNDEIFGIQLEAIKIIGRLSSVNPAYVVPSLRKTL 720 ILQHLGSNFDPQLAQPDNLRLLFMALNDEIFGIQLEAIKIIGRLSSVNPAYVVPSLRKTL Sbjct: 661 ILQHLGSNFDPQLAQPDNLRLLFMALNDEIFGIQLEAIKIIGRLSSVNPAYVVPSLRKTL 720 Query: 721 LELLTQLKFSNMPKKKEESATLLCTLINSSDEVAKPYIDPILDVILPKCQDASSAVASTA 780 LELLTQLKFSNMPKKKEESATLLCTLINSSDEVAKPYIDPILDVILPKCQDASSAVASTA Sbjct: 721 LELLTQLKFSNMPKKKEESATLLCTLINSSDEVAKPYIDPILDVILPKCQDASSAVASTA 780 Query: 781 LKVLGELSVVGGKEMTRYLKELMPLIINTFQDQSNSFKRDAALTTLGQLAASSGYVVGPL 840 LKVLGELSVVGGKEMTRYLKELMPLIINTFQDQSNSFKRDAALTTLGQLAASSGYVVGPL Sbjct: 781 LKVLGELSVVGGKEMTRYLKELMPLIINTFQDQSNSFKRDAALTTLGQLAASSGYVVGPL 840 Query: 841 LDYPELLGILINILKTENNPHIRRGTVRLIGILGALDPYKHREIEVTSNSKSSVEQNAPS 900 LDYPELLGILINILKTENNPHIRRGTVRLIGILGALDPYKHREIEVTSNSKSSVEQNAPS Sbjct: 841 LDYPELLGILINILKTENNPHIRRGTVRLIGILGALDPYKHREIEVTSNSKSSVEQNAPS 900 Query: 901 IDIALLMQGVSPSNDEYYPTVVIHNLMKILNDPSLSIHHTAAIQAIMHIFQNLGLRCVSF 960 IDIALLMQGVSPSNDEYYPTVVIHNLMKILNDPSLSIHHTAAIQAIMHIFQNLGLRCVSF Sbjct: 901 IDIALLMQGVSPSNDEYYPTVVIHNLMKILNDPSLSIHHTAAIQAIMHIFQNLGLRCVSF 960 Query: 961 LDQIIPGIILVMRSCPPSQLDFYFQQLGSLISIVKQHIRPHVEKIYGVIREFFPIIKLQI 1020 LDQIIPGIILVMRSCPPSQLDFYFQQLGSLISIVKQHIRPHVEKIYGVIREFFPIIKLQI Sbjct: 961 LDQIIPGIILVMRSCPPSQLDFYFQQLGSLISIVKQHIRPHVEKIYGVIREFFPIIKLQI 1020 Query: 1021 TIISVIESISKALEGEFKRFVPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDY 1080 TIISVIESISKALEGEFKRFVPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDY Sbjct: 1021 TIISVIESISKALEGEFKRFVPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDY 1080 Query: 1081 SHLIMPIVVRMTEYSAGSLKKISIITLGRLAKNINLSEMSSRIVQALVRILNNGDRELTK 1140 SHLIMPIVVRMTEYSAGSLKKISIITLGRLAKNINLSEMSSRIVQALVRILNNGDRELTK Sbjct: 1081 SHLIMPIVVRMTEYSAGSLKKISIITLGRLAKNINLSEMSSRIVQALVRILNNGDRELTK 1140 Query: 1141 ATMNTLSLLLLQLGTDFVVFVPVINKALLRNRIQHSVYDQLVNKLLNNECLPTNIIFDKE 1200 ATMNTLSLLLLQLGTDFVVFVPVINKALLRNRIQHSVYDQLVNKLLNNECLPTNIIFDKE Sbjct: 1141 ATMNTLSLLLLQLGTDFVVFVPVINKALLRNRIQHSVYDQLVNKLLNNECLPTNIIFDKE 1200 Query: 1201 NEVPERKNYEDEMQVTKLPVNQNILKNAWYCSQQKTKEDWQEWIRRLSIQLLKESPSACL 1260 NEVPERKNYEDEMQVTKLPVNQNILKNAWYCSQQKTKEDWQEWIRRLSIQLLKESPSACL Sbjct: 1201 NEVPERKNYEDEMQVTKLPVNQNILKNAWYCSQQKTKEDWQEWIRRLSIQLLKESPSACL 1260 Query: 1261 RSCSSLVSVYYPLARELFNASFSSCWVELQTSYQEDLIQALCKALSSSENPPEIYQMLLN 1320 RSCSSLVSVYYPLARELFNASFSSCWVELQTSYQEDLIQALCKALSSSENPPEIYQMLLN Sbjct: 1261 RSCSSLVSVYYPLARELFNASFSSCWVELQTSYQEDLIQALCKALSSSENPPEIYQMLLN 1320 Query: 1321 LVEFMEHDDKPLPIPIHTLGKYAQKCHAFAKALHYKEVEFLEEPKNSTIEALISINNQLH 1380 LVEFMEHDDKPLPIPIHTLGKYAQKCHAFAKALHYKEVEFLEEPKNSTIEALISINNQLH Sbjct: 1321 LVEFMEHDDKPLPIPIHTLGKYAQKCHAFAKALHYKEVEFLEEPKNSTIEALISINNQLH 1380 Query: 1381 QTDSAIGILKHAQQHNELQLKETWYEKLQRWEDALAAYNEKEAAGEDSVEVMMGKLRSLY 1440 QTDSAIGILKHAQQHNELQLKETWYEKLQRWEDALAAYNEKEAAGEDSVEVMMGKLRSLY Sbjct: 1381 QTDSAIGILKHAQQHNELQLKETWYEKLQRWEDALAAYNEKEAAGEDSVEVMMGKLRSLY 1440 Query: 1441 ALGEWEELSKLASEKWGTAKPEVKKAMAPLAAGAAWGLEQWDEIAQYTSVMKSQSPDKEF 1500 ALGEWEELSKLASEKWGTAKPEVKKAMAPLAA AAWGLEQWDEIAQYTSVMKSQSPDKEF Sbjct: 1441 ALGEWEELSKLASEKWGTAKPEVKKAMAPLAA-AAWGLEQWDEIAQYTSVMKSQSPDKEF 1499 Query: 1501 YDAILCLHRNNFKKAEVHIFNARDLLVTELSALVNESYNRAYNVVVRAQIIAELEEIIKY 1560 YDAILCLHRNNFKKAEVHIFNARDLLVTELSALVNESYNRAYNVVVRAQIIAELEEIIKY Sbjct: 1500 YDAILCLHRNNFKKAEVHIFNARDLLVTELSALVNESYNRAYNVVVRAQIIAELEEIIKY 1559 Query: 1561 KKLPQNSDKRLTMRETWNTRLLGCQKNIDVWQRILRVRSLVIKPKEDAQVRIKFANLCRK 1620 KKLPQNSDKRLTMRETWNTRLLGCQKNIDVWQRILRVRSLVIKPKEDAQVRIKFANLCRK Sbjct: 1560 KKLPQNSDKRLTMRETWNTRLLGCQKNIDVWQRILRVRSLVIKPKEDAQVRIKFANLCRK 1619 Query: 1621 SGRMALAKKVLNTLLEETDDPDHPNTAKASPPVVYAQLKYLWATGLQDEALKQLINFTSR 1680 SGRMALAKKVLNTLLEETDDPDHPNTAKASPPVVYAQLKYLWATGLQDEALKQLINFTSR Sbjct: 1620 SGRMALAKKVLNTLLEETDDPDHPNTAKASPPVVYAQLKYLWATGLQDEALKQLINFTSR 1679 Query: 1681 MAHDLGLDPNNMIAQSVPQQSKRVPRHVEDYTKLLARCFLKQGEWRVCLQPKWRLSNPDS 1740 MAHDLGLDPNNMIAQSVPQQSKRVPRHVEDYTKLLARCFLKQGEWRVCLQPKWRLSNPDS Sbjct: 1680 MAHDLGLDPNNMIAQSVPQQSKRVPRHVEDYTKLLARCFLKQGEWRVCLQPKWRLSNPDS 1739 Query: 1741 ILGSYLLATHFDNTWYKAWHNWALANFEVISMLTSVSKKKQEGSDASSVTDINEFDNGMI 1800 ILGSYLLATHFDNTWYKAWHNWALANFEVISMLTSVSKKKQEGSDASSVTDINEFDNGMI Sbjct: 1740 ILGSYLLATHFDNTWYKAWHNWALANFEVISMLTSVSKKKQEGSDASSVTDINEFDNGMI 1799 Query: 1801 GVNTFDAKEVHYSSNLIHRHVIPAIKGFFHSISLSESSSLQDALRLLTLWFTFGGIPEAT 1860 GVNTFDAKEVHYSSNLIHRHVIPAIKGFFHSISLSESSSLQDALRLLTLWFTFGGIPEAT Sbjct: 1800 GVNTFDAKEVHYSSNLIHRHVIPAIKGFFHSISLSESSSLQDALRLLTLWFTFGGIPEAT 1859 Query: 1861 QAMHEGFNLIQIGTWLEVLPQLISRIHQPNQIVSRSLLSLLSDLGKAHPQALVYPLMVAI 1920 QAMHEGFNLIQIGTWLEVLPQLISRIHQPNQIVSRSLLSLLSDLGKAHPQALVYPLMVAI Sbjct: 1860 QAMHEGFNLIQIGTWLEVLPQLISRIHQPNQIVSRSLLSLLSDLGKAHPQALVYPLMVAI 1919 Query: 1921 KSESLSRQKAALSIIEKMRIHSPVLVDQAELVSHELIRMAVLWHEQWYEGLDDASRQFFG 1980 KSESLSRQKAALSIIEKMRIHSPVLVDQAELVSHELIRMAVLWHEQWYEGLDDASRQFFG Sbjct: 1920 KSESLSRQKAALSIIEKMRIHSPVLVDQAELVSHELIRMAVLWHEQWYEGLDDASRQFFG 1979 Query: 1981 EHNTEKMFAALEPLYEMLKRGPETLREISFQNSFGRDLNDAYEWLMNYKKSKDVSNLNQA 2040 EHNTEKMFAALEPLYEMLKRGPETLREISFQNSFGRDLNDAYEWLMNYKKSKDVSNLNQA Sbjct: 1980 EHNTEKMFAALEPLYEMLKRGPETLREISFQNSFGRDLNDAYEWLMNYKKSKDVSNLNQA 2039 Query: 2041 WDIYYNVFRKIGKQLPQLQTLELQHVSPKLLSAHDLELAVPGTRASGGKPIVKISKFEPV 2100 WDIYYNVFRKIGKQLPQLQTLELQHVSPKLLSAHDLELAVPGTRASGGKPIVKISKFEPV Sbjct: 2040 WDIYYNVFRKIGKQLPQLQTLELQHVSPKLLSAHDLELAVPGTRASGGKPIVKISKFEPV 2099 Query: 2101 FSVISSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLQNDAECFRRH 2160 FSVISSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLQNDAECFRRH Sbjct: 2100 FSVISSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLQNDAECFRRH 2159 Query: 2161 LDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWVMLQMAPDYDNLT 2220 LDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWVMLQMAPDYDNLT Sbjct: 2160 LDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWVMLQMAPDYDNLT 2219 Query: 2221 LLQKVEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDR 2280 LLQKVEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDR Sbjct: 2220 LLQKVEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDR 2279 Query: 2281 HPSNLMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAMEVSGIEGSFRIT 2340 HPSNLMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAMEVSGIEGSFRIT Sbjct: 2280 HPSNLMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAMEVSGIEGSFRIT 2339 Query: 2341 CENVMKVLRDNKGSLMAILEAFAFDPLINWGFDLPTKKIEEETGIQLPVMNANELLSNGA 2400 CENVMKVLRDNKGSLMAILEAFAFDPLINWGFDLPTKKIEEETGIQLPVMNANELLSNGA Sbjct: 2340 CENVMKVLRDNKGSLMAILEAFAFDPLINWGFDLPTKKIEEETGIQLPVMNANELLSNGA 2399 Query: 2401 ITEEEVQRVENEHKNAIRNARAMLVLKRITDKLTGNDIRRFNDLDVPEQVDKLIQQATSV 2460 ITEEEVQRVENEHKNAIRNARAMLVLKRITDKLTGNDIRRFNDLDVPEQVDKLIQQATSV Sbjct: 2400 ITEEEVQRVENEHKNAIRNARAMLVLKRITDKLTGNDIRRFNDLDVPEQVDKLIQQATSV 2459 Query: 2461 ENLCQHYIGWCPFW 2474 ENLCQHYIGWCPFW Sbjct: 2460 ENLCQHYIGWCPFW 2473 >YJR066W TOR1 SGDID:S0003827, Chr X from 559108-566520 Length = 2470 Score = 3307 bits (8575), Expect = 0.0 Identities = 1647/2410 (68%), Positives = 1983/2410 (82%), Gaps = 11/2410 (0%) Query: 75 VDSELDTTFST-LNLIFDKLKSDVPQERASGANELSTTLTSLAREVSAEQFQRFSNSLNN 133 + S D F L IF +L SD +ER + L L SL E+S E+FQ SN +NN Sbjct: 62 IGSNGDVNFKPILEKIFRELTSDYKEERKLASISLFDLLVSLEHELSIEEFQAVSNDINN 121 Query: 134 KIFELIHGFTSSEKIGGILAVDTLISFYLSTEELPNQTSRLANYLRVLIPSSDIEVMRLA 193 KI EL+H +S ++G +L++DTLISFY TE LPN+TSRLA YLR LIPS+D+EVMRLA Sbjct: 122 KILELVHTKKTSTRVGAVLSIDTLISFYAYTERLPNETSRLAGYLRGLIPSNDVEVMRLA 181 Query: 194 ANTLGRLTVPGGTLTSDFVEFEVRTCIDWLTLTADNNS-SSSKLEYRRHAALLIIKALAD 252 A TLG+L VPGGT TSDFVEFE+++C++WLT + + NS SSSK ++ +HAALLII ALA+ Sbjct: 182 AKTLGKLAVPGGTYTSDFVEFEIKSCLEWLTASTEKNSFSSSKPDHAKHAALLIITALAE 241 Query: 253 NSPYLLYPYVNSILDNIWVPLRDAKLIIRLDAAVALGKCLTIIQDRDPALGKQWFQRLFQ 312 N PYLLY Y+NSILDNIW LRD L+IR+DA++ L KCL+ +++RDP L QW QRL Sbjct: 242 NCPYLLYQYLNSILDNIWRALRDPHLVIRIDASITLAKCLSTLRNRDPQLTSQWVQRLAT 301 Query: 313 GCTHGLSLNTNDSVHATLLVFRELLSLKAPYLRDKYDDIYKSTMKYKEYKFDVIRREVYA 372 C +G +NT + +HA+LLV++E+L LK P+L +D + + + Y+ +K +IR ++Y Sbjct: 302 SCEYGFQVNTLECIHASLLVYKEILFLKDPFLNQVFDQMCLNCIAYENHKAKMIREKIYQ 361 Query: 373 ILPLLAAFDPAIFTKKYLDRIMVHYLRYLKNIDMNAANN--SDKPFILVSIGDIAFEVGS 430 I+PLLA+F+P +F KYL +IM +YL L N N + DKP IL+SIGDIA+EVG Sbjct: 362 IVPLLASFNPQLFAGKYLHQIMDNYLEILTNAPANKIPHLKDDKPQILISIGDIAYEVGP 421 Query: 431 SISPYMTLILDNIREGLRTKFKVRKQFEKDLFYCIGKLACALGPAFAKHLNKDLLNLMLN 490 I+PY+ ILD I L+TKFK RK+FE ++FYCIG+LA LGP K LN+++L+LM Sbjct: 422 DIAPYVKQILDYIEHDLQTKFKFRKKFENEIFYCIGRLAVPLGPVLGKLLNRNILDLMFK 481 Query: 491 CPMSDHMQETLMILNEKIPSLESTVNSRILNLLSISLSGEKFIQSNQYDFNNQFSIEKAR 550 CP+SD+MQET IL E+IPSL +N +LNL+ +LSG FIQ FS E+AR Sbjct: 482 CPLSDYMQETFQILTERIPSLGPKINDELLNLVCSTLSGTPFIQPGSPMEIPSFSRERAR 541 Query: 551 KSRNQSFMKKTGESNDDITDAQILIQCFKMLQLIHHQYSLTEFVRLITISYIEHEDSSVR 610 + RN++ ++KTGESNDD D +I+IQ F+ML+ I ++SL EFVR++ +SYIEH D VR Sbjct: 542 EWRNKNILQKTGESNDDNNDIKIIIQAFRMLKNIKSRFSLVEFVRIVALSYIEHTDPRVR 601 Query: 611 KLAALTSCDLFIKDDICKQTSVHALHSVSEVLSKLLMIAITDPVAEIRLEILQHLGSNFD 670 KLAALTSC++++KD+ICKQTS+H+L++VSEVLSKLL I I DP+ +IRLE+L++L FD Sbjct: 602 KLAALTSCEIYVKDNICKQTSLHSLNTVSEVLSKLLAITIADPLQDIRLEVLKNLNPCFD 661 Query: 671 PQLAQPDNLRLLFMALNDEIFGIQLEAIKIIGRLSSVNPAYVVPSLRKTLLELLTQLKFS 730 PQLAQPDNLRLLF AL+DE F IQ A++++GRLSSVNPAYV+PS+RK LLELLT+LKFS Sbjct: 662 PQLAQPDNLRLLFTALHDESFNIQSVAMELVGRLSSVNPAYVIPSIRKILLELLTKLKFS 721 Query: 731 NMPKKKEESATLLCTLINSSDEVAKPYIDPILDVILPKCQDASSAVASTALKVLGELSVV 790 ++KEE+A+LLCTLI SS +VAKPYI+P+L+V+LPK QD SS VASTAL+ +GELSVV Sbjct: 722 TSSREKEETASLLCTLIRSSKDVAKPYIEPLLNVLLPKFQDTSSTVASTALRTIGELSVV 781 Query: 791 GGKEMTRYLKELMPLIINTFQDQSNSFKRDAALTTLGQLAASSGYVVGPLLDYPELLGIL 850 GG++M YLK+L PLII TFQDQSNSFKR+AAL LGQLAASSGYV+ PLLDYPELLGIL Sbjct: 782 GGEDMKIYLKDLFPLIIKTFQDQSNSFKREAALKALGQLAASSGYVIDPLLDYPELLGIL 841 Query: 851 INILKTENNPHIRRGTVRLIGILGALDPYKHREIEVTSNSKSSVEQNAPSIDIALLMQGV 910 +NILKTEN+ +IRR TV LIGILGA+DPY+ +E EVTS + S EQNAP IDIALLMQG+ Sbjct: 842 VNILKTENSQNIRRQTVTLIGILGAIDPYRQKEREVTSTTDISTEQNAPPIDIALLMQGM 901 Query: 911 SPSNDEYYPTVVIHNLMKILNDPSLSIHHTAAIQAIMHIFQNLGLRCVSFLDQIIPGIIL 970 SPSNDEYY TVVIH L+KIL DPSLS +HTA IQAIMHIFQ LGL+CVSFLDQIIP I+ Sbjct: 902 SPSNDEYYTTVVIHCLLKILKDPSLSSYHTAVIQAIMHIFQTLGLKCVSFLDQIIPTILD 961 Query: 971 VMRSCPPSQLDFYFQQLGSLISIVKQHIRPHVEKIYGVIREFFPIIKLQITIISVIESIS 1030 VMR+C S L+FYFQQL SLI IV+QHIRPHV+ I+ I++F + KLQIT++SVIE+IS Sbjct: 962 VMRTCSQSLLEFYFQQLCSLIIIVRQHIRPHVDSIFQAIKDFSSVAKLQITLVSVIEAIS 1021 Query: 1031 KALEGEFKRFVPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDYSHLIMPIVVR 1090 KALEGEFKR VP TLT FL ILEND+S+ +++ R+L+ L +FGPNLE YSHLI P +V+ Sbjct: 1022 KALEGEFKRLVPLTLTLFLVILENDKSSDKVLSRRVLRLLESFGPNLEGYSHLITPKIVQ 1081 Query: 1091 MTEYSAGSLKKISIITLGRLAKNINLSEMSSRIVQALVRILNN-GDRELTKATMNTLSLL 1149 M E+++G+L++ +IIT+G+LAK+++L EMSSRIV +L+R+L++ EL+K MNTLSLL Sbjct: 1082 MAEFTSGNLQRSAIITIGKLAKDVDLFEMSSRIVHSLLRVLSSTTSDELSKVIMNTLSLL 1141 Query: 1150 LLQLGTDFVVFVPVINKALLRNRIQHSVYDQLVNKLLNNECLPTNIIFDKENEV-PERKN 1208 L+Q+GT F +F+PVIN+ L++ IQH++YD L N++LNN+ LPT I+ + P + Sbjct: 1142 LIQMGTSFAIFIPVINEVLMKKHIQHTIYDDLTNRILNNDVLPTKILEANTTDYKPAEQM 1201 Query: 1209 YEDEMQVTKLPVNQNILKNAWYCSQQKTKEDWQEWIRRLSIQLLKESPSACLRSCSSLVS 1268 + V KLP+NQ++LK+AW SQQ+TKEDWQEW +RLSIQLLKESPS LR+CS+L S Sbjct: 1202 EAADAGVAKLPINQSVLKSAWNSSQQRTKEDWQEWSKRLSIQLLKESPSHALRACSNLAS 1261 Query: 1269 VYYPLARELFNASFSSCWVELQTSYQEDLIQALCKALSSSENPPEIYQMLLNLVEFMEHD 1328 +YYPLA+ELFN +F+ W EL + YQEDLI +LC ALSS NPPEI+Q LLNLVEFMEHD Sbjct: 1262 MYYPLAKELFNTAFACVWTELYSQYQEDLIGSLCIALSSPLNPPEIHQTLLNLVEFMEHD 1321 Query: 1329 DKPLPIPIHTLGKYAQKCHAFAKALHYKEVEFLEEPKNSTIEALISINNQLHQTDSAIGI 1388 DK LPIP +LG+YA++CHA+AKALHYKE++F++EP+NSTIE+LISINNQL+QTD+AIGI Sbjct: 1322 DKALPIPTQSLGEYAERCHAYAKALHYKEIKFIKEPENSTIESLISINNQLNQTDAAIGI 1381 Query: 1389 LKHAQQHNELQLKETWYEKLQRWEDALAAYNEKEAAGEDSVEVMMGKLRSLYALGEWEEL 1448 LKHAQQH+ LQLKETW+EKL+RWEDAL AYNE+E AG+ SV V +GK+RSL+ALGEWE+L Sbjct: 1382 LKHAQQHHSLQLKETWFEKLERWEDALHAYNEREKAGDTSVSVTLGKMRSLHALGEWEQL 1441 Query: 1449 SKLASEKWGTAKPEVKKAMAPLAAGAAWGLEQWDEIAQYTSVMKSQSPDKEFYDAILCLH 1508 S+LA+ KW +K + KK +APLAAGAAWGL +WD + QY SVMK +SPDKEF+DAIL LH Sbjct: 1442 SQLAARKWKVSKLQTKKLIAPLAAGAAWGLGEWDMLEQYISVMKPKSPDKEFFDAILYLH 1501 Query: 1509 RNNFKKAEVHIFNARDLLVTELSALVNESYNRAYNVVVRAQIIAELEEIIKYKKLPQNSD 1568 +N++ A HI NARDLLVTE+SAL+NESYNRAY+V+VR QII E EEIIKYK+LP NS+ Sbjct: 1502 KNDYDNASKHILNARDLLVTEISALINESYNRAYSVIVRTQIITEFEEIIKYKQLPPNSE 1561 Query: 1569 KRLTMRETWNTRLLGCQKNIDVWQRILRVRSLVIKPKEDAQVRIKFANLCRKSGRMALAK 1628 K+L + W RLLGCQKN+D+WQR+LRVRSLVIKPK+D Q+ IKFANLCRKSGRM LA Sbjct: 1562 KKLHYQNLWTKRLLGCQKNVDLWQRVLRVRSLVIKPKQDLQIWIKFANLCRKSGRMRLAN 1621 Query: 1629 KVLNTLLEETDDPDHPNTAKASPPVVYAQLKYLWATGLQDEALKQLINFTSRMAHDLGLD 1688 K LN LLE +DP PNT KA PPVVYAQLKY+WATG EAL LI FTSR+AHDLGLD Sbjct: 1622 KALNMLLEGGNDPSLPNTFKAPPPVVYAQLKYIWATGAYKEALNHLIGFTSRLAHDLGLD 1681 Query: 1689 PNNMIAQSVPQQSKRVPRHVEDYTKLLARCFLKQGEWRVCLQPKWRLSNPDSILGSYLLA 1748 PNNMIAQSV S +VE+YTKLLARCFLKQGEWR+ QP WR +NPD+ILGSYLLA Sbjct: 1682 PNNMIAQSVKLSSASTAPYVEEYTKLLARCFLKQGEWRIATQPNWRNTNPDAILGSYLLA 1741 Query: 1749 THFDNTWYKAWHNWALANFEVISML---TSVSKKKQEGSDASSVTDIN-EFDNGMIGVNT 1804 THFD WYKAWHNWALANFEVISM+ T ++ K + D ++V + N D ++G + Sbjct: 1742 THFDKNWYKAWHNWALANFEVISMVQEETKLNGGKNDDDDDTAVNNDNVRIDGSILGSGS 1801 Query: 1805 FDAKEVHYSSNLIHRHVIPAIKGFFHSISLSESSSLQDALRLLTLWFTFGGIPEATQAMH 1864 Y LI RHV+PAIKGFFHSISL E+S LQD LRLLTL F FGGI E +QAM+ Sbjct: 1802 LTINGNRYPLELIQRHVVPAIKGFFHSISLLETSCLQDTLRLLTLLFNFGGIKEVSQAMY 1861 Query: 1865 EGFNLIQIGTWLEVLPQLISRIHQPNQIVSRSLLSLLSDLGKAHPQALVYPLMVAIKSES 1924 EGFNL++I WLEVLPQLISRIHQP+ VS SLLSLLSDLGKAHPQALVYPL VAIKSES Sbjct: 1862 EGFNLMKIENWLEVLPQLISRIHQPDPTVSNSLLSLLSDLGKAHPQALVYPLTVAIKSES 1921 Query: 1925 LSRQKAALSIIEKMRIHSPVLVDQAELVSHELIRMAVLWHEQWYEGLDDASRQFFGEHNT 1984 +SRQKAALSIIEK+RIHSPVLV+QAELVSHELIR+AVLWHE WYEGL+DASRQFF EHN Sbjct: 1922 VSRQKAALSIIEKIRIHSPVLVNQAELVSHELIRVAVLWHELWYEGLEDASRQFFVEHNI 1981 Query: 1985 EKMFAALEPLYEMLKRGPETLREISFQNSFGRDLNDAYEWLMNYKKSKDVSNLNQAWDIY 2044 EKMF+ LEPL++ L P+TL E+SFQ SFGRDLNDAYEWL NYKKSKD++NLNQAWDIY Sbjct: 1982 EKMFSTLEPLHKHLGNEPQTLSEVSFQKSFGRDLNDAYEWLNNYKKSKDINNLNQAWDIY 2041 Query: 2045 YNVFRKIGKQLPQLQTLELQHVSPKLLSAHDLELAVPGTRASGGKPIVKISKFEPVFSVI 2104 YNVFRKI +Q+PQLQTL+LQHVSP+LL+ HDLELAVPGT GKP ++I+KFEP+FSVI Sbjct: 2042 YNVFRKITRQIPQLQTLDLQHVSPQLLATHDLELAVPGTYFP-GKPTIRIAKFEPLFSVI 2100 Query: 2105 SSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLQNDAECFRRHLDIQ 2164 SSKQRPRKF IKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLL+ND+ECF+RHLDIQ Sbjct: 2101 SSKQRPRKFSIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNTLLKNDSECFKRHLDIQ 2160 Query: 2165 QYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWVMLQMAPDYDNLTLLQK 2224 QYPAIPLSPKSGLLGWVPNSDTFHVLIREHR+AKKIPLNIEHWVMLQMAPDY+NLTLLQK Sbjct: 2161 QYPAIPLSPKSGLLGWVPNSDTFHVLIREHRDAKKIPLNIEHWVMLQMAPDYENLTLLQK 2220 Query: 2225 VEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDRHPSN 2284 +EVFTYAL+NT+GQDLYK+LWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDRHPSN Sbjct: 2221 IEVFTYALDNTKGQDLYKILWLKSRSSETWLERRTTYTRSLAVMSMTGYILGLGDRHPSN 2280 Query: 2285 LMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAMEVSGIEGSFRITCENV 2344 LMLDRITGKVIHIDFGDCFEAAILREK+PEKVPFRLTRMLTYAMEVSGIEGSFRITCENV Sbjct: 2281 LMLDRITGKVIHIDFGDCFEAAILREKYPEKVPFRLTRMLTYAMEVSGIEGSFRITCENV 2340 Query: 2345 MKVLRDNKGSLMAILEAFAFDPLINWGFDLPTKKIEEETGIQLPVMNANELLSNGAITEE 2404 M+VLRDNK SLMAILEAFA DPLI+WGFDLP +K+ E+TGI LP++N +ELL GAIT E Sbjct: 2341 MRVLRDNKESLMAILEAFALDPLIHWGFDLPPQKLTEQTGIPLPLINPSELLRKGAITVE 2400 Query: 2405 EVQRVENEHKNAIRNARAMLVLKRITDKLTGNDIRRFNDLDVPEQVDKLIQQATSVENLC 2464 E +E E +N +NARAMLVL+RITDKLTGNDI+RFN+LDVPEQVDKLIQQATS+E LC Sbjct: 2401 EAANMEAEQQNETKNARAMLVLRRITDKLTGNDIKRFNELDVPEQVDKLIQQATSIERLC 2460 Query: 2465 QHYIGWCPFW 2474 QHYIGWCPFW Sbjct: 2461 QHYIGWCPFW 2470 >YBL088C TEL1 SGDID:S0000184, Chr II from 51013-59376, reverse complement Length = 2787 Score = 183 bits (465), Expect = 3e-46 Identities = 129/385 (33%), Positives = 191/385 (49%), Gaps = 32/385 (8%) Query: 2094 ISKFEPVFSVISSKQRPRKFCIKGSDGKDYKYVLKG-HEDIRQDSLVMQLFGLVNTLLQN 2152 +S E V + P+ SDG K ++KG ++D+RQD+++ Q+F VN +LQN Sbjct: 2431 VSVNETVGITTTGLSLPKIVTFNISDGTTQKALMKGSNDDLRQDAIMEQVFQQVNKVLQN 2490 Query: 2153 DAECFRRHLDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWVMLQM 2212 D L I+ Y +PL PK+G++ +V NS + H ++ + KI + M + Sbjct: 2491 DKVLRNLDLGIRTYKVVPLGPKAGIIEFVANSTSLHQILSKLHTNDKITFDQARKGMKAV 2550 Query: 2213 APDYDNLTLLQKVEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVMSMTG 2272 + ++++ + N + Q L + W E + TYT+ +A S+ G Sbjct: 2551 QTKSNE----ERLKAYLKITNEIKPQ-LRNFFFDSFPDPLDWFEAKKTYTKGVAASSIVG 2605 Query: 2273 YILGLGDRHPSNLMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAMEVSG 2332 YILGLGDRH +N++LD TG+ IHID G F+ L PE VPFRLTR + V+G Sbjct: 2606 YILGLGDRHLNNILLDCSTGEPIHIDLGIAFDQGKLL-PIPELVPFRLTRDIVDGFGVTG 2664 Query: 2333 IEGSFRITCENVMKVLRDNKGSLMAILEAFAFDPLINWGFDLPTKKIE---EETGIQLPV 2389 ++G FR +CE V VLR + +M +L +DPL +W P KK E EE Sbjct: 2665 VDGLFRRSCERVYAVLRKDYVKVMCVLNILKWDPLYSWVMS-PVKKYEHLFEEEHEITNF 2723 Query: 2390 MNANELLSNGAITEEEVQRVENEHKNAIRNARAMLVLKRITDKLTGNDIRRFNDLDVPEQ 2449 N ++ +SN NE++ + R LK + +KL G N L V Sbjct: 2724 DNVSKFISNND---------RNENQESYR------ALKGVEEKLMG------NGLSVESS 2762 Query: 2450 VDKLIQQATSVENLCQHYIGWCPFW 2474 V LIQQAT NL Y+GW PF+ Sbjct: 2763 VQDLIQQATDPSNLSVIYMGWSPFY 2787 >YBR136W MEC1 SGDID:S0000340, Chr II from 505626-512732 Length = 2368 Score = 154 bits (390), Expect = 1e-37 Identities = 105/328 (32%), Positives = 165/328 (50%), Gaps = 15/328 (4%) Query: 2089 KPIVKISKFEPVFSVISSKQRPRKFCIKGSDGKDYKYVLKGHEDIRQDSLVMQLFGLVNT 2148 +P+V I +F + V SS ++P++ I GSDG Y + K ED+RQD+ MQ ++ Sbjct: 2041 RPVVSIIRFGSSYKVFSSLKKPKQLNIIGSDGNIYGIMCK-KEDVRQDNQYMQFATTMDF 2099 Query: 2149 LLQNDAECFRRHLDIQQYPAIPLSPKSGLLGWVPNSDTFHVLIREHREAKKIPLNIEHWV 2208 LL D +R L I Y + L G+L VPN T ++ E+ KI +++ Sbjct: 2100 LLSKDIASRKRSLGINIYSVLSLREDCGILEMVPNVVTLRSILSTKYESLKIKYSLK--- 2156 Query: 2209 MLQMAPDYDNLTLLQKVEVFTYALNNTEGQDLYKVLWLKSRSSETWLERRTTYTRSLAVM 2268 + + + + K+E + ++ LY+ W R TY RS AVM Sbjct: 2157 --SLHDRWQHTAVDGKLEFYMEQVDKFP-PILYQWFLENFPDPINWFNARNTYARSYAVM 2213 Query: 2269 SMTGYILGLGDRHPSNLMLDRITGKVIHIDFGDCFEAAILREKFPEKVPFRLTRMLTYAM 2328 +M G+ILGLGDRH N++LD TGKV+H+DF DC R PE VPFRLT L A+ Sbjct: 2214 AMVGHILGLGDRHCENILLDIQTGKVLHVDF-DCLFEKGKRLPVPEIVPFRLTPNLLDAL 2272 Query: 2329 EVSGIEGSFRITCENVMKVLRDNKGSLMAILEAFAFDPLINWGFDLPTK-------KIEE 2381 + G EG+F+ + E + ++R N+ +LM ++E +D ++ K I+ Sbjct: 2273 GIIGTEGTFKKSSEVTLALMRKNEVALMNVIETIMYDRNMDHSIQKALKVLRNKIRGIDP 2332 Query: 2382 ETGIQLPVMNANELLSNGAITEEEVQRV 2409 + G+ L V E L A +E+ + ++ Sbjct: 2333 QDGLVLSVAGQTETLIQEATSEDNLSKM 2360 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.319 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,685,668 Number of Sequences: 6497 Number of extensions: 662439 Number of successful extensions: 2371 Number of sequences better than 1.0e-30: 4 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 2337 Number of HSP's gapped (non-prelim): 9 length of query: 2474 length of database: 2,996,526 effective HSP length: 107 effective length of query: 2367 effective length of database: 2,301,347 effective search space: 5447288349 effective search space used: 5447288349 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 331 (132.1 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKL049C Annotated|11:346409:345720| frame 6; YKL049C/CSE4; Verified; this gene contains 1 exon (229 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKL049C CSE4 SGDID:S0001532, Chr XI from 345717-346130, reverse ... 267 9e-73 >YKL049C CSE4 SGDID:S0001532, Chr XI from 345717-346130, reverse complement Length = 137 Score = 267 bits (683), Expect = 9e-73 Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 93 METEVPAPVRTHSYALDRYVRQKRREKQRKQSLKRVEKKYTPSELALYEIRKYQRSTDLL 152 METEVPAPVRTHSYALDRYVRQKRREKQRKQSLKRVEKKYTPSELALYEIRKYQRSTDLL Sbjct: 1 METEVPAPVRTHSYALDRYVRQKRREKQRKQSLKRVEKKYTPSELALYEIRKYQRSTDLL 60 Query: 153 ISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRIT 212 ISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRIT Sbjct: 61 ISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRIT 120 Query: 213 IMKKDMQLARRIRGQFI 229 IMKKDMQLARRIRGQFI Sbjct: 121 IMKKDMQLARRIRGQFI 137 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.128 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,198,404 Number of Sequences: 6497 Number of extensions: 48927 Number of successful extensions: 359 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 358 Number of HSP's gapped (non-prelim): 1 length of query: 229 length of database: 2,996,526 effective HSP length: 87 effective length of query: 142 effective length of database: 2,431,287 effective search space: 345242754 effective search space used: 345242754 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 321 (128.3 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YKL198C Annotated|11:70223:68274| frame 6; YKL198C/PTK1; Verified; this gene contains 1 exon (649 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YKL198C PTK1 SGDID:S0001681, Chr XI from 69021-70220, reverse co... 724 0.0 YKL199C YKT9 SGDID:S0001682, Chr XI from 68270-69109, reverse co... 591 e-169 YJR059W PTK2 SGDID:S0003820, Chr X from 545479-547935 587 e-168 >YKL198C PTK1 SGDID:S0001681, Chr XI from 69021-70220, reverse complement Length = 399 Score = 724 bits (1868), Expect = 0.0 Identities = 359/368 (97%), Positives = 361/368 (98%), Gaps = 3/368 (0%) Query: 1 MTVSHNHSTKISQQPISSVSAFKFFGKKLLSSSHGNKLKKKASLPPDFHSTSTNDSESSS 60 MTVSHNHSTKISQQPISSVSAFKFFGKKLLSSSHGNKLKKKASLPPDFHSTSTNDSESSS Sbjct: 1 MTVSHNHSTKISQQPISSVSAFKFFGKKLLSSSHGNKLKKKASLPPDFHSTSTNDSESSS 60 Query: 61 PKLPNSLKTSRRANSFAHTTNSKRSLSSASTKILPPAGSSTSISRGNRHSSTSRNLSNSK 120 PKLPNSLKTSRRANSFAHTTNSKRSLSSASTKILPPAGSSTSISRGNRHSSTSRNLSNSK Sbjct: 61 PKLPNSLKTSRRANSFAHTTNSKRSLSSASTKILPPAGSSTSISRGNRHSSTSRNLSNSK 120 Query: 121 FSSERLVYNPYGVSTPSTSLSSVSTSMKKDPDLGFYLHDGDSKIRMLPIPIVDPNEYLPD 180 FSSERLVYNPYGVSTPSTSLSSVSTSMKKDPDLGFYLHDGDSKIRMLPIPIVDPNEYLPD Sbjct: 121 FSSERLVYNPYGVSTPSTSLSSVSTSMKKDPDLGFYLHDGDSKIRMLPIPIVDPNEYLPD 180 Query: 181 EMKEASIQLSDNFVFDDENKTIGWGGSCEVRKIRSKYRKKDVFALKKLNMIYNETPEKFY 240 EMKEASIQLSDNFVFDDENKTIGWGGSCEVRKIRSKYRKKDVFALKKLNMIYNETPEKFY Sbjct: 181 EMKEASIQLSDNFVFDDENKTIGWGGSCEVRKIRSKYRKKDVFALKKLNMIYNETPEKFY 240 Query: 241 NAAPKEFIIAKQLSHHVHITNTFLLVKVPTTVYTTRGWGFVMELGLRDLFAMIQKSGWRH 300 NAAPKEFIIAKQLSHHVHITNTFLLVKVPTTVYTTRGWGFVMELGLRDLFAMIQKSGWRH Sbjct: 241 NAAPKEFIIAKQLSHHVHITNTFLLVKVPTTVYTTRGWGFVMELGLRDLFAMIQKSGWRH 300 Query: 301 VALAEKFCIFKQVACGVKFCHDQGIAHRDLKPENVLLSPDGVCKLTDFGISDWYHTDPHD 360 VALAEKFCIFKQVACGVKFCHDQGIAHRDLKPENVLLSPDGVCKLTDFGISDWYH H Sbjct: 301 VALAEKFCIFKQVACGVKFCHDQGIAHRDLKPENVLLSPDGVCKLTDFGISDWYH---HG 357 Query: 361 LSSPVKKC 368 + PV+ C Sbjct: 358 STRPVQPC 365 >YKL199C YKT9 SGDID:S0001682, Chr XI from 68270-69109, reverse complement Length = 279 Score = 591 bits (1523), Expect = e-169 Identities = 279/279 (100%), Positives = 279/279 (100%) Query: 371 MIGSPPYAPPEVMFYDSKKHYDTELQQPYDPRALDCYGLGIILMTLVNNVIPFLESCSFD 430 MIGSPPYAPPEVMFYDSKKHYDTELQQPYDPRALDCYGLGIILMTLVNNVIPFLESCSFD Sbjct: 1 MIGSPPYAPPEVMFYDSKKHYDTELQQPYDPRALDCYGLGIILMTLVNNVIPFLESCSFD 60 Query: 431 TGFRDYCDAYENFIRLHDRAFRNRGNYRPGPGMEYHLARNFKNGHASRVAWRLADPEAAT 490 TGFRDYCDAYENFIRLHDRAFRNRGNYRPGPGMEYHLARNFKNGHASRVAWRLADPEAAT Sbjct: 61 TGFRDYCDAYENFIRLHDRAFRNRGNYRPGPGMEYHLARNFKNGHASRVAWRLADPEAAT 120 Query: 491 RYTIDDLFEDPWFQGIETCVDANDKYVCKKPIIKTTTYENPRGFHIATDVAATTPTSNPF 550 RYTIDDLFEDPWFQGIETCVDANDKYVCKKPIIKTTTYENPRGFHIATDVAATTPTSNPF Sbjct: 121 RYTIDDLFEDPWFQGIETCVDANDKYVCKKPIIKTTTYENPRGFHIATDVAATTPTSNPF 180 Query: 551 LKNRVPIRSMVDIAAHPSPTATVLASSPPPPPPATHVPAEALFTLRETPPPQLATLTLSE 610 LKNRVPIRSMVDIAAHPSPTATVLASSPPPPPPATHVPAEALFTLRETPPPQLATLTLSE Sbjct: 181 LKNRVPIRSMVDIAAHPSPTATVLASSPPPPPPATHVPAEALFTLRETPPPQLATLTLSE 240 Query: 611 EPPATPAPSAPSAPSARVRGHSPHRVGASPSEHCQQLGP 649 EPPATPAPSAPSAPSARVRGHSPHRVGASPSEHCQQLGP Sbjct: 241 EPPATPAPSAPSAPSARVRGHSPHRVGASPSEHCQQLGP 279 >YJR059W PTK2 SGDID:S0003820, Chr X from 545479-547935 Length = 818 Score = 587 bits (1513), Expect = e-168 Identities = 304/619 (49%), Positives = 406/619 (65%), Gaps = 69/619 (11%) Query: 18 SVSAFKFFGKKLLSSS----------------HGNKLKKKASLPPDFHSTSTNDSESSSP 61 SVS K GK+L +SS +G L+K+ + P S S +S SSS Sbjct: 15 SVSTLKLLGKRLFNSSSHTDNSSLLLSAEQLGNGRSLRKRPTSPSISGSGSGGNSPSSSA 74 Query: 62 KLPNSLKTSRRANSFAHTTNSKRSLSSASTKIL--------------PPA---GSSTSIS 104 + R + A S S+SS + + P+ G+ T I+ Sbjct: 75 GARQRSASLHRRKNNASVGFSNGSVSSHKSSVALQDLIKHNNNPYLNSPSDILGTGTGIA 134 Query: 105 -----------------------RGNRHSST---SRNLSNSKFSSERLVYNPYGVST--- 135 R H+ S ++++ F +E +VYNPYG+S Sbjct: 135 STRDRDRAVLDREKEKERARNKERNTHHAGLPQRSNSMASHHFPNENIVYNPYGISPNHA 194 Query: 136 -PSTSLSSVSTSMKKDPDLGFYLHDGDSKIRMLPIPIVDPNEYLPDEMKEASIQLSDNFV 194 P T+ + + + K+ DL FY+HDG+SKIRMLP+PI +PN++LP++MK+ S+ L+DNFV Sbjct: 195 RPDTAFAD-TLNTNKENDLSFYMHDGNSKIRMLPLPIANPNDFLPEDMKQYSVHLTDNFV 253 Query: 195 FDDENKTIGWGGSCEVRKIRSKYRKKDVFALKKLNMIYNETPEKFYNAAPKEFIIAKQLS 254 FD +NK IG GGS EVRK++S YR+KDV+ALKKLNMIY+E+PEKFY KEFIIAK LS Sbjct: 254 FDTDNKPIGSGGSSEVRKVKSSYRQKDVYALKKLNMIYHESPEKFYKRCSKEFIIAKHLS 313 Query: 255 HHVHITNTFLLVKVPTTVYTTRGWGFVMELGLRDLFAMIQKSGWRHVALAEKFCIFKQVA 314 H+VHITNTF L+KVPTT YTTRGWGF+MELG++DLF +++++GW++V EK+C+FKQVA Sbjct: 314 HNVHITNTFYLLKVPTTTYTTRGWGFIMELGVKDLFQLMERTGWKNVPFNEKYCLFKQVA 373 Query: 315 CGVKFCHDQGIAHRDLKPENVLLSPDGVCKLTDFGISDWYHTDPHDLSSPVKKCAGMIGS 374 G+KFCHD GIAHRDLKPENVL+S +G+CKLTDFGISDWYH PHD +SPVK C GMIGS Sbjct: 374 QGIKFCHDNGIAHRDLKPENVLISKEGICKLTDFGISDWYHVIPHDYTSPVKTCQGMIGS 433 Query: 375 PPYAPPEVMFYDSKKHYDTELQQPYDPRALDCYGLGIILMTLVNNVIPFLESCSFDTGFR 434 PPY PPEVM++D+KKHY + Q+PY+P A+D Y LGI+L+T++NN+IPF++SC+ D FR Sbjct: 434 PPYTPPEVMYFDAKKHYPEKFQKPYNPLAMDSYALGIMLITMINNIIPFIDSCNTDARFR 493 Query: 435 DYCDAYENFIRLHDRAFRNRGNYRPGPGMEYHLARNFKNGHASRVAWRLADPEAATRYTI 494 ++ +Y+NFI + FR++G ++PGPG EY LARNFKN A+R+AWRLADP ATRYT+ Sbjct: 494 EFEVSYDNFINHQNPHFRDKGCHKPGPGSEYSLARNFKNTDATRIAWRLADPNPATRYTM 553 Query: 495 DDLFEDPWFQGIETCVDANDKYVCKKPIIKTTTYENPRGFHI--ATDVAATTPTSNPFLK 552 DDLF DP+FQ IETCV+ ND + + P ++ +T N + A TSNPFLK Sbjct: 554 DDLFNDPFFQQIETCVEPNDDDLVRVPELRKSTSTNDFSENSLDAPHDQEVIHTSNPFLK 613 Query: 553 NRV---PIRSMVDIAAHPS 568 RSM++IA PS Sbjct: 614 KETLTSKPRSMLEIAESPS 632 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.133 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,278,411 Number of Sequences: 6497 Number of extensions: 208056 Number of successful extensions: 1879 Number of sequences better than 1.0e-30: 3 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1870 Number of HSP's gapped (non-prelim): 5 length of query: 649 length of database: 2,996,526 effective HSP length: 97 effective length of query: 552 effective length of database: 2,366,317 effective search space: 1306206984 effective search space used: 1306206984 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YLR313C Annotated|12:762342:760357| frame 5; YLR313C/SPH1; Verified; this gene contains 1 exon (661 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YLR313C SPH1 SGDID:S0004305, Chr XII from 760750-762342, reverse... 1018 0.0 >YLR313C SPH1 SGDID:S0004305, Chr XII from 760750-762342, reverse complement Length = 530 Score = 1018 bits (2631), Expect = 0.0 Identities = 526/526 (100%), Positives = 526/526 (100%) Query: 1 MISSELTNDQIIDLISDYKNFKRIIEASVPEDDRRRNQNRQNRNKDLTKLSNVQFWQLTT 60 MISSELTNDQIIDLISDYKNFKRIIEASVPEDDRRRNQNRQNRNKDLTKLSNVQFWQLTT Sbjct: 1 MISSELTNDQIIDLISDYKNFKRIIEASVPEDDRRRNQNRQNRNKDLTKLSNVQFWQLTT 60 Query: 61 DVNDELMKRLTDSGADASLNDLDLKRGKAQSKLSRLKDAKFHKLILDIFTEIERRNLHHL 120 DVNDELMKRLTDSGADASLNDLDLKRGKAQSKLSRLKDAKFHKLILDIFTEIERRNLHHL Sbjct: 61 DVNDELMKRLTDSGADASLNDLDLKRGKAQSKLSRLKDAKFHKLILDIFTEIERRNLHHL 120 Query: 121 DMGTHNNGLDEGDLNFYLNDTLFESFKINDDFMSVNGIISIEVFRELKTQFTLYFQNTLH 180 DMGTHNNGLDEGDLNFYLNDTLFESFKINDDFMSVNGIISIEVFRELKTQFTLYFQNTLH Sbjct: 121 DMGTHNNGLDEGDLNFYLNDTLFESFKINDDFMSVNGIISIEVFRELKTQFTLYFQNTLH 180 Query: 181 RIDPVDTTTTRLPILLETIIKIAKLIGDLLPVLSSVSLQSSLENEIVYLKSALSHAITST 240 RIDPVDTTTTRLPILLETIIKIAKLIGDLLPVLSSVSLQSSLENEIVYLKSALSHAITST Sbjct: 181 RIDPVDTTTTRLPILLETIIKIAKLIGDLLPVLSSVSLQSSLENEIVYLKSALSHAITST 240 Query: 241 RYFLTYGDLIPRIVAQSSISEVIFAFCNIAQIVKIKSTSRDDISRNEGELSDIEAGMKPL 300 RYFLTYGDLIPRIVAQSSISEVIFAFCNIAQIVKIKSTSRDDISRNEGELSDIEAGMKPL Sbjct: 241 RYFLTYGDLIPRIVAQSSISEVIFAFCNIAQIVKIKSTSRDDISRNEGELSDIEAGMKPL 300 Query: 301 KIIEKVKNEKNGKDISSLGDSGSTAVSFPSSGKPITKKSDMPVVVASPSISIIEKSESSI 360 KIIEKVKNEKNGKDISSLGDSGSTAVSFPSSGKPITKKSDMPVVVASPSISIIEKSESSI Sbjct: 301 KIIEKVKNEKNGKDISSLGDSGSTAVSFPSSGKPITKKSDMPVVVASPSISIIEKSESSI 360 Query: 361 RESGKVRNNTSGETNLASVSPLKNTKNSSRITSEPSPREGLPLKVVSNSRSPSPQGNTLP 420 RESGKVRNNTSGETNLASVSPLKNTKNSSRITSEPSPREGLPLKVVSNSRSPSPQGNTLP Sbjct: 361 RESGKVRNNTSGETNLASVSPLKNTKNSSRITSEPSPREGLPLKVVSNSRSPSPQGNTLP 420 Query: 421 LIGKFRQDYQASPPKKVITKPVAETAKPYANIPPAADVLYSPTVTKMRKFREKVQKFAPN 480 LIGKFRQDYQASPPKKVITKPVAETAKPYANIPPAADVLYSPTVTKMRKFREKVQKFAPN Sbjct: 421 LIGKFRQDYQASPPKKVITKPVAETAKPYANIPPAADVLYSPTVTKMRKFREKVQKFAPN 480 Query: 481 SGLGLRISTSEENLNNSDVNSTTHNANINNLVEFVESKSMVVLPMA 526 SGLGLRISTSEENLNNSDVNSTTHNANINNLVEFVESKSMVVLPMA Sbjct: 481 SGLGLRISTSEENLNNSDVNSTTHNANINNLVEFVESKSMVVLPMA 526 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.314 0.131 0.353 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,870,913 Number of Sequences: 6497 Number of extensions: 182656 Number of successful extensions: 817 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 813 Number of HSP's gapped (non-prelim): 2 length of query: 661 length of database: 2,996,526 effective HSP length: 97 effective length of query: 564 effective length of database: 2,366,317 effective search space: 1334602788 effective search space used: 1334602788 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YLR389C Annotated|12:902660:899577| frame 6; YLR389C/STE23; Verified; this gene contains 1 exon (1027 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YLR389C STE23 SGDID:S0004381, Chr XII from 899693-902659, revers... 1957 0.0 YPR122W AXL1 SGDID:S0006326, Chr XVI from 782040-785666 156 2e-38 >YLR389C STE23 SGDID:S0004381, Chr XII from 899693-902659, reverse complement Length = 988 Score = 1957 bits (5071), Expect = 0.0 Identities = 971/972 (99%), Positives = 971/972 (99%) Query: 1 MGVSLLASSSAFVTKPLLTQLVHLSPISLNFTVRRFKPFTCLSRYYTTNPYNMTSNFKTF 60 MGVSLLASSSAFVTKPLLTQLVHLSPISLNFTVRRFKPFTCLSRYYTTNPYNMTSNFKTF Sbjct: 1 MGVSLLASSSAFVTKPLLTQLVHLSPISLNFTVRRFKPFTCLSRYYTTNPYNMTSNFKTF 60 Query: 61 NLDFLKPDLDERSYRFIELPNKLKALLIQDPKADKAAASLDVNIGAFEDPKNLPGLAHFC 120 NLDFLKPDLDERSYRFIELPNKLKALLIQDPKADKAAASLDVNIGAFEDPKNLPGLAHFC Sbjct: 61 NLDFLKPDLDERSYRFIELPNKLKALLIQDPKADKAAASLDVNIGAFEDPKNLPGLAHFC 120 Query: 121 EHLLFMGSEKFPDENEYSSYLSKHGGSSNAYTASQNTNYFFEVNHQHLFGALDRFSGFFS 180 EHLLFMGSEKFPDENEYSSYLSKHGGSSNAYTASQNTNYFFEVNHQHLFGALDRFSGFFS Sbjct: 121 EHLLFMGSEKFPDENEYSSYLSKHGGSSNAYTASQNTNYFFEVNHQHLFGALDRFSGFFS 180 Query: 181 CPLFNKDSTDKEINAVNSENKKNLQNDIWRIYQLDKSLTNTKHPYHKFSTGNIETLGTLP 240 CPLFNKDSTDKEINAVNSENKKNLQNDIWRIYQLDKSLTNTKHPYHKFSTGNIETLGTLP Sbjct: 181 CPLFNKDSTDKEINAVNSENKKNLQNDIWRIYQLDKSLTNTKHPYHKFSTGNIETLGTLP 240 Query: 241 KENGLNVRDELLKFHKNFYSANLMKLCILGREDLDTLSDWTYDLFKDVANNGREVPLYAE 300 KENGLNVRDELLKFHKNFYSANLMKLCILGREDLDTLSDWTYDLFKDVANNGREVPLYAE Sbjct: 241 KENGLNVRDELLKFHKNFYSANLMKLCILGREDLDTLSDWTYDLFKDVANNGREVPLYAE 300 Query: 301 PIMQPEHLQKIIQVRPVKDLKKLEISFTVPDMEEHWESKPPRILSHLIGHEGSGSLLAHL 360 PIMQPEHLQKIIQVRPVKDLKKLEISFTVPDMEEHWESKPPRILSHLIGHEGSGSLLAHL Sbjct: 301 PIMQPEHLQKIIQVRPVKDLKKLEISFTVPDMEEHWESKPPRILSHLIGHEGSGSLLAHL 360 Query: 361 KKLGWANELSAGGHTVSKGNAFFAVDIDLTDNGLTHYRDVIVLIFQYIEMLKNSLPQKWI 420 KKLGWANELSAGGHTVSKGNAFFAVDIDLTDNGLTHYRDVIVLIFQYIEMLKNSLPQKWI Sbjct: 361 KKLGWANELSAGGHTVSKGNAFFAVDIDLTDNGLTHYRDVIVLIFQYIEMLKNSLPQKWI 420 Query: 421 FNELQDISNATFKFKQAGSPSSTVSSLAKCLEKDYIPVSRILAMGLLTKYEPDLLTQYTD 480 FNELQDISNATFKFKQAGSPSSTVSSLAKCLEKDYIPVSRILAMGLLTKYEPDLLTQYTD Sbjct: 421 FNELQDISNATFKFKQAGSPSSTVSSLAKCLEKDYIPVSRILAMGLLTKYEPDLLTQYTD 480 Query: 481 ALVPENSRVTLISRSLETDSAEKWYGTAYKVVDYPADLIKNMKSPGLNPALTLPRPNEFV 540 ALVPENSRVTLISRSLETDSAEKWYGTAYKVVDYPADLIKNMKSPGLNPALTLPRPNEFV Sbjct: 481 ALVPENSRVTLISRSLETDSAEKWYGTAYKVVDYPADLIKNMKSPGLNPALTLPRPNEFV 540 Query: 541 STNFKVDKIDGIKPLDEPVLLLSDDVSKLWYKKDDRFWQPRGYIYLSFKLPHTHASIINS 600 STNFKVDKIDGIKPLDEPVLLLSDDVSKLWYKKDDRFWQPRGYIYLSFKLPHTHASIINS Sbjct: 541 STNFKVDKIDGIKPLDEPVLLLSDDVSKLWYKKDDRFWQPRGYIYLSFKLPHTHASIINS 600 Query: 601 MLSTLYTQLANDALKDVQYDAACADLRISFNKTNQGLAITASGFNEKLIILLTRFLQGVN 660 MLSTLYTQLANDALKDVQYDAACADLRISFNKTNQGLAITASGFNEKLIILLTRFLQGVN Sbjct: 601 MLSTLYTQLANDALKDVQYDAACADLRISFNKTNQGLAITASGFNEKLIILLTRFLQGVN 660 Query: 661 SFEPKKDRFEILKDKTIRHLKNLLYEVPYSQMSNYYNAIINERSWSTAEKLQVFEKLTFE 720 SFEPKKDRFEILKDKTIRHLKNLLYEVPYSQMSNYYNAIINERSWSTAEKLQVFEKLTFE Sbjct: 661 SFEPKKDRFEILKDKTIRHLKNLLYEVPYSQMSNYYNAIINERSWSTAEKLQVFEKLTFE 720 Query: 721 QLINFIPTIYEGVYFETLIHGNIKHEEALEVDSLIKSLIPNNIHNLQVSNNRLRSYLLPK 780 QLINFIPTIYEGVYFETLIHGNIKHEEALEVDSLIKSLIPNNIHNLQVSNNRLRSYLLPK Sbjct: 721 QLINFIPTIYEGVYFETLIHGNIKHEEALEVDSLIKSLIPNNIHNLQVSNNRLRSYLLPK 780 Query: 781 GKTFRYETALKDSQNVNSCIQHVTQLDVYSEDLSALSGLFAQLIHEPCFDTLRTKEQLGY 840 GKTFRYETALKDSQNVNSCIQHVTQLDVYSEDLSALSGLFAQLIHEPCFDTLRTKEQLGY Sbjct: 781 GKTFRYETALKDSQNVNSCIQHVTQLDVYSEDLSALSGLFAQLIHEPCFDTLRTKEQLGY 840 Query: 841 VVFSSSLNNHGTANIRILIQSEHTTPYLEWRINNFYETFGQVLRDMPEEDFEKHKEALCN 900 VVFSSSLNNHGTANIRILIQSEHTTPYLEWRINNFYETFGQVLRDMPEEDFEKHKEALCN Sbjct: 841 VVFSSSLNNHGTANIRILIQSEHTTPYLEWRINNFYETFGQVLRDMPEEDFEKHKEALCN 900 Query: 901 SLLQKFKNMAEESARYTAAIYLGDYNFTHRQKKAKLVANITKQQMIDFYENYIMSENASK 960 SLLQKFKNMAEESARYTAAIYLGDYNFTHRQKKAKLVANITKQQMIDFYENYIMSENASK Sbjct: 901 SLLQKFKNMAEESARYTAAIYLGDYNFTHRQKKAKLVANITKQQMIDFYENYIMSENASK 960 Query: 961 LILHLKSQVENK 972 LILHLKSQVE K Sbjct: 961 LILHLKSQVETK 972 >YPR122W AXL1 SGDID:S0006326, Chr XVI from 782040-785666 Length = 1208 Score = 156 bits (394), Expect = 2e-38 Identities = 108/404 (26%), Positives = 186/404 (46%), Gaps = 59/404 (14%) Query: 72 RSYRFIELPNKLKALLIQDPKADKAAASLDVNIGAFEDPKNLPGLAHFCEHLLFM-GSEK 130 R+++ +LPN + AL+I DP ++ SL V G+ DPK++ GLAH CEH++ GS+K Sbjct: 22 RTHKVCKLPNGILALIISDPTDTSSSCSLTVCTGSHNDPKDIAGLAHLCEHMILSAGSKK 81 Query: 131 FPDENEYSSYLSKHGGSSNAYTASQNTNYFFEV-----NHQHLFGA-LDRFSGFFSCPLF 184 +PD + + ++K+ GS NA+T + T ++FE+ N + F + LD F+ FF PLF Sbjct: 82 YPDPGLFHTLIAKNNGSQNAFTTGEQTTFYFELPNTQNNGEFTFESILDVFASFFKEPLF 141 Query: 185 NKDSTDKEINAVNSENKKNLQNDIWRIYQLDKSLTNTKHPYHKFSTGNIETLGTLPKENG 244 N KEI A+ SE++ N+ + Y + L N HP+ +FSTGNI +L ++P+ Sbjct: 142 NPLLISKEIYAIQSEHEGNISSTTKIFYHAARILANPDHPFSRFSTGNIHSLSSIPQLKK 201 Query: 245 LNVRDELLKFHKNFYSANLMKLCILGREDLDTLSDWTYDLFKDV----ANNGREVPLYAE 300 + ++ L + +N + + LCI G + ++ L+ F D+ A R + + Sbjct: 202 IKLKSSLNTYFENNFFGENITLCIRGPQSVNILTKLALSKFGDIKPKSAVKERSISIRTR 261 Query: 301 PIMQPEHLQ----------------KIIQVRPVKDLKK---------------------- 322 + + L+ KI+ K K Sbjct: 262 SFRRSKSLKKRQDSSKNDYSDLKTFKILNTTWEKKYKNTMCFQQFPECNSIFINSNKVPI 321 Query: 323 LEISFTVPDMEEHWESKPPRILSH----LIGHEGSGSLLAHLKKLGWANELSAGGHTVSK 378 + + F V D + +I SH L G E GSL +L GW A + Sbjct: 322 MRLLFPVSDKNTRFTKDDIKIYSHLWCELFGDESPGSLSYYLASKGWLTGCFAFTSEFAI 381 Query: 379 GNAFFAVDIDLTDNGLTHYRDVIVLIFQYIEMLKNSLPQKWIFN 422 G+ ++++LT++G + + + ++ L LP ++ N Sbjct: 382 GDIGLILELELTNSGWENIKRITTIV------LNRLLPSFYVMN 419 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.317 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,693,251 Number of Sequences: 6497 Number of extensions: 325762 Number of successful extensions: 976 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 971 Number of HSP's gapped (non-prelim): 4 length of query: 1027 length of database: 2,996,526 effective HSP length: 100 effective length of query: 927 effective length of database: 2,346,826 effective search space: 2175507702 effective search space used: 2175507702 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 328 (131.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YLR205C Annotated|12:553679:552726| frame 6; YLR205C/HMX1; Verified; this gene contains 1 exon (317 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YLR205C HMX1 SGDID:S0004195, Chr XII from 552726-553547, reverse... 550 e-158 >YLR205C HMX1 SGDID:S0004195, Chr XII from 552726-553547, reverse complement Length = 273 Score = 550 bits (1418), Expect = e-158 Identities = 273/273 (100%), Positives = 273/273 (100%) Query: 45 MRHGFIYRQGILAYYYVFDAIEQEIDRLLNDPVTEEELQTSTILKQFWLEDFRRSTQIYK 104 MRHGFIYRQGILAYYYVFDAIEQEIDRLLNDPVTEEELQTSTILKQFWLEDFRRSTQIYK Sbjct: 1 MRHGFIYRQGILAYYYVFDAIEQEIDRLLNDPVTEEELQTSTILKQFWLEDFRRSTQIYK 60 Query: 105 DLKLLYSNTFKSTESLNEFLATFQKPPLLQQFINNIHENIHKEPCTILSYCHVLYLALFA 164 DLKLLYSNTFKSTESLNEFLATFQKPPLLQQFINNIHENIHKEPCTILSYCHVLYLALFA Sbjct: 61 DLKLLYSNTFKSTESLNEFLATFQKPPLLQQFINNIHENIHKEPCTILSYCHVLYLALFA 120 Query: 165 GGKLIRSNLYRRLGLFPNFEKLSQKELVKKGTNFFTFSDLGPTEETRLKWEYKKNYELAT 224 GGKLIRSNLYRRLGLFPNFEKLSQKELVKKGTNFFTFSDLGPTEETRLKWEYKKNYELAT Sbjct: 121 GGKLIRSNLYRRLGLFPNFEKLSQKELVKKGTNFFTFSDLGPTEETRLKWEYKKNYELAT 180 Query: 225 RTELTEAQKLQIISVAEGIFDWNFNIVAEIGELNRRELMGKFSFKCITYLYEEWMFNKDS 284 RTELTEAQKLQIISVAEGIFDWNFNIVAEIGELNRRELMGKFSFKCITYLYEEWMFNKDS Sbjct: 181 RTELTEAQKLQIISVAEGIFDWNFNIVAEIGELNRRELMGKFSFKCITYLYEEWMFNKDS 240 Query: 285 ATRRALHTVMLLVLSIIAIWVLYFLVKSFLSIV 317 ATRRALHTVMLLVLSIIAIWVLYFLVKSFLSIV Sbjct: 241 ATRRALHTVMLLVLSIIAIWVLYFLVKSFLSIV 273 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.324 0.139 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,893,114 Number of Sequences: 6497 Number of extensions: 83696 Number of successful extensions: 294 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 293 Number of HSP's gapped (non-prelim): 1 length of query: 317 length of database: 2,996,526 effective HSP length: 90 effective length of query: 227 effective length of database: 2,411,796 effective search space: 547477692 effective search space used: 547477692 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 323 (129.0 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YMR269W Annotated|13:804455:805090| frame 2; YMR269W; Uncharacterized; this gene contains 1 exon (211 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YMR269W YMR269W SGDID:S0004882, Chr XIII from 804663-805091 265 3e-72 >YMR269W YMR269W SGDID:S0004882, Chr XIII from 804663-805091 Length = 142 Score = 265 bits (678), Expect = 3e-72 Identities = 135/139 (97%), Positives = 136/139 (97%) Query: 73 IKFTQNEAVATAVSKSSSPLYRWFVKGEGLKGTITNLGKKEEASFVVSSASSSKGKKRRR 132 + QNEAVATAVSKSSSPLYRWFVKGEGLKGTITNLGKKEEASFVVSSASSSKGKKRRR Sbjct: 4 LNLLQNEAVATAVSKSSSPLYRWFVKGEGLKGTITNLGKKEEASFVVSSASSSKGKKRRR 63 Query: 133 RDEDDNKVKRKKLKKDKKTSNDSESKKKKKKKSKKESKKGKKSKHSSDEGDKSKHKKSKK 192 RDEDDNKVKRKKLKKDKKTSNDSESKKKKKKKSKKESKKGKKSKHSSDEGDKSKHKKSKK Sbjct: 64 RDEDDNKVKRKKLKKDKKTSNDSESKKKKKKKSKKESKKGKKSKHSSDEGDKSKHKKSKK 123 Query: 193 SKKHKKEESSARRDRKEHI 211 SKKHKKEESSARRDRKEHI Sbjct: 124 SKKHKKEESSARRDRKEHI 142 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.303 0.124 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,447,885 Number of Sequences: 6497 Number of extensions: 75963 Number of successful extensions: 3341 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 3304 Number of HSP's gapped (non-prelim): 1 length of query: 211 length of database: 2,996,526 effective HSP length: 86 effective length of query: 125 effective length of database: 2,437,784 effective search space: 304723000 effective search space used: 304723000 T: 11 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.8 bits) S2: 320 (127.9 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YNL208W Annotated|14:254417:255016| frame 2; YNL208W; Uncharacterized; this gene contains 1 exon (199 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YNL208W YNL208W SGDID:S0005152, Chr XIV from 254417-255031 246 2e-66 >YNL208W YNL208W SGDID:S0005152, Chr XIV from 254417-255031 Length = 204 Score = 246 bits (628), Expect = 2e-66 Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MSANEFYSSGQQGQYNQQNNQERTGAPNNGQYGADNGNPNGERGLFSTIVGGSAGAYAGS 60 MSANEFYSSGQQGQYNQQNNQERTGAPNNGQYGADNGNPNGERGLFSTIVGGSAGAYAGS Sbjct: 1 MSANEFYSSGQQGQYNQQNNQERTGAPNNGQYGADNGNPNGERGLFSTIVGGSAGAYAGS 60 Query: 61 KVSNNHSKLSGVLGAIGGAFLANKISDERKEHKQQEQYGNSNFGGAPQGGHNNHHRQ 117 KVSNNHSKLSGVLGAIGGAFLANKISDERKEHKQQEQYGNSNFGGAPQGGHNNHHRQ Sbjct: 61 KVSNNHSKLSGVLGAIGGAFLANKISDERKEHKQQEQYGNSNFGGAPQGGHNNHHRQ 117 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.308 0.139 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,609,806 Number of Sequences: 6497 Number of extensions: 93741 Number of successful extensions: 915 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 913 Number of HSP's gapped (non-prelim): 2 length of query: 199 length of database: 2,996,526 effective HSP length: 86 effective length of query: 113 effective length of database: 2,437,784 effective search space: 275469592 effective search space used: 275469592 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (22.0 bits) S2: 320 (127.9 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YNL083W Annotated|14:471377:473014| frame 2; YNL083W/SAL1; Verified; this gene contains 1 exon (545 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YNL083W YNL083W SGDID:S0005027, Chr XIV from 471374-472858 811 0.0 YPR011C YPR011C SGDID:S0006215, Chr XVI from 583057-584037, reve... 149 1e-36 >YNL083W YNL083W SGDID:S0005027, Chr XIV from 471374-472858 Length = 494 Score = 811 bits (2095), Expect = 0.0 Identities = 408/441 (92%), Positives = 414/441 (93%) Query: 1 MLLKNCETDKQRDIRYACLFKELDVKGNGQVTLDNLISAFEKNDHPLKGNDEAIKMLFTA 60 MLLKNCETDKQRDIRYACLFKELDVKGNGQVTLDNLISAFEKNDHPLKGNDEAIKMLFTA Sbjct: 1 MLLKNCETDKQRDIRYACLFKELDVKGNGQVTLDNLISAFEKNDHPLKGNDEAIKMLFTA 60 Query: 61 MDVNKDSVVDLSDFKKYASNAESQIWNGFQRIDLDHDGKIGINEINRYLSDLDNQSICNN 120 MDVNKDSVVDLSDFKKYASNAESQIWNGFQRIDLDHDGKIGINEINRYLSDLDNQSICNN Sbjct: 61 MDVNKDSVVDLSDFKKYASNAESQIWNGFQRIDLDHDGKIGINEINRYLSDLDNQSICNN 120 Query: 121 ELNHELSNEKMNKFSRFFEWAFPKRKANIALRGQASHKKNTDNDRSKKTTDSDLYVTYDQ 180 ELNHELSNEK+NKFSRFFEWAFPKRKANIALRGQASHKKNTDNDRSKKTTDSDLYVTYDQ Sbjct: 121 ELNHELSNEKVNKFSRFFEWAFPKRKANIALRGQASHKKNTDNDRSKKTTDSDLYVTYDQ 180 Query: 181 WRDFLLLVPRKQGSRLHTAYSYFYLFNEDVDLSSEGDVTLINDFIRGFGFFIAGGISGVI 240 WRDFLLLVPRKQGSRLHTAYSYFYLFNEDVDLSSEGDVTLINDFIRGFGFFIAGGISGVI Sbjct: 181 WRDFLLLVPRKQGSRLHTAYSYFYLFNEDVDLSSEGDVTLINDFIRGFGFFIAGGISGVI 240 Query: 241 SRTCTAPFDRLKVFLIARTDLSSILLNSKTDLLAKNPNADINKISSPLAKAVKSLYRQGG 300 SRTCTAPFDRLKVFLIARTDLSSILLNSKTDLLAKNPNADINKISSPLAKAVKSLYRQGG Sbjct: 241 SRTCTAPFDRLKVFLIARTDLSSILLNSKTDLLAKNPNADINKISSPLAKAVKSLYRQGG 300 Query: 301 IKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTKLEGCRDTKDLSKFSTYIAGGLAGMA 360 IKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTKLEGCRDTKDLSKFSTYIAGGLAGMA Sbjct: 301 IKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTKLEGCRDTKDLSKFSTYIAGGLAGMA 360 Query: 361 AQFSVYPIDTLKFRVQCAPLDTKLKGNNLLFQTAKDMFREGGLRLFYRGVTVGIVGIFPY 420 AQFSVYPIDTLKFRVQCAPLDTKLKGNNLLFQTAKDMFREGG ++ + G Sbjct: 361 AQFSVYPIDTLKFRVQCAPLDTKLKGNNLLFQTAKDMFREGGGQIILQRCHSRYSGHISL 420 Query: 421 AALDLGTFSALKKWYIAKQAK 441 + G F LKK + K Sbjct: 421 CCIRFGDFFCLKKMVYCQTGK 441 >YPR011C YPR011C SGDID:S0006215, Chr XVI from 583057-584037, reverse complement Length = 326 Score = 149 bits (375), Expect = 1e-36 Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 40/319 (12%) Query: 231 FIAGGISGVISRTCTAPFDRLKVFLIARTDLSSILLNSKTDLLAKNPNADINKISSPLAK 290 F+AGG++G +SRT +PF+R+K+ L ++ +S + + Sbjct: 26 FLAGGVAGAVSRTVVSPFERVKILLQVQSSTTSY--------------------NRGIFS 65 Query: 291 AVKSLYRQGGIKAFYVGNGLNVIKVFPESSIKFGSFEVTKKIMTKLEGCRDTKDLSKFST 350 +++ +Y + G K + GNGLN I++FP S+++F +E KK + + G + L+ Sbjct: 66 SIRQVYHEEGTKGLFRGNGLNCIRIFPYSAVQFVVYEACKKKLFHVNGNNGQEQLTNTQR 125 Query: 351 YIAGGLAGMAAQFSVYPIDTLKFR--VQCAPLDT--KLKGNNL-----LFQTAKDMFR-E 400 +G L G + + YP+D +K R +Q A L + + K ++ ++Q + +R E Sbjct: 126 LFSGALCGGCSVVATYPLDLIKTRLSIQTANLSSLNRSKAKSISKPPGIWQLLSETYRLE 185 Query: 401 GGLRLFYRGVTVGIVGIFPYAALDLGTFSALKKWYIAKQAKTLNLPQDQVT-LSNLVVLP 459 GGLR YRGV +G+ PY AL+ + L+++ + N Q + SNL L Sbjct: 186 GGLRGLYRGVWPTSLGVVPYVALNFAVYEQLREFGV-------NSSDAQPSWKSNLYKLT 238 Query: 460 MGAFSGTVGASVVYPINLLRTRLQ--AQGTYAHPYVYNGFKDVLLKTLEREGYQGLFKGL 517 +GA SG V ++ YP +LLR R Q A G + Y D L+ EG G +KGL Sbjct: 239 IGAISGGVAQTITYPFDLLRRRFQVLAMGGNELGFRYTSVWDALVTIGRAEGVSGYYKGL 298 Query: 518 VPTLAKVCPAVSISYLCYE 536 L KV P+ ++S+L YE Sbjct: 299 AANLFKVVPSTAVSWLVYE 317 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.321 0.138 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,296,617 Number of Sequences: 6497 Number of extensions: 151579 Number of successful extensions: 712 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 696 Number of HSP's gapped (non-prelim): 4 length of query: 545 length of database: 2,996,526 effective HSP length: 95 effective length of query: 450 effective length of database: 2,379,311 effective search space: 1070689950 effective search space used: 1070689950 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 325 (129.8 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YNL195C Annotated|14:272307:271522| frame 6; YNL195C; Uncharacterized; this gene contains 1 exon (261 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YNL195C YNL195C SGDID:S0005139, Chr XIV from 271573-272304, reve... 454 e-129 >YNL195C YNL195C SGDID:S0005139, Chr XIV from 271573-272304, reverse complement Length = 243 Score = 454 bits (1169), Expect = e-129 Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MLGLGQSAQAYASDDALNMNQAKDKTYSVPGCGRASDLKYPHRDGHSSSHEQRSGILPTE 60 MLGLGQSAQAYASDDALNMNQAKDKTYSVPGCGRASDLKYPHRDGHSSSHEQRSGILPTE Sbjct: 1 MLGLGQSAQAYASDDALNMNQAKDKTYSVPGCGRASDLKYPHRDGHSSSHEQRSGILPTE 60 Query: 61 CPGPTLNTGAGSIGIPGCGKVTNRVVSDYNKNARSTLANFDSSKMTEARMNSKNVPIGCQ 120 CPGPTLNTGAGSIGIPGCGKVTNRVVSDYNKNARSTLANFDSSKMTEARMNSKNVPIGCQ Sbjct: 61 CPGPTLNTGAGSIGIPGCGKVTNRVVSDYNKNARSTLANFDSSKMTEARMNSKNVPIGCQ 120 Query: 121 DTSDPHFNGPIDQHVPGAGSPQSQPHHIDAWNSVSSRRADNNNQDMMDPQTASSDRYNEK 180 DTSDPHFNGPIDQHVPGAGSPQSQPHHIDAWNSVSSRRADNNNQDMMDPQTASSDRYNEK Sbjct: 121 DTSDPHFNGPIDQHVPGAGSPQSQPHHIDAWNSVSSRRADNNNQDMMDPQTASSDRYNEK 180 Query: 181 MMREENSGVSASSYTTKVQGYPASIPSFNQETEEKETYA 219 MMREENSGVSASSYTTKVQGYPASIPSFNQETEEKETYA Sbjct: 181 MMREENSGVSASSYTTKVQGYPASIPSFNQETEEKETYA 219 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.308 0.125 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,731,248 Number of Sequences: 6497 Number of extensions: 80425 Number of successful extensions: 227 Number of sequences better than 1.0e-30: 1 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 226 Number of HSP's gapped (non-prelim): 1 length of query: 261 length of database: 2,996,526 effective HSP length: 89 effective length of query: 172 effective length of database: 2,418,293 effective search space: 415946396 effective search space used: 415946396 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 322 (128.6 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YOR069W Annotated|15:453769:455796| frame 1; YOR069W/VPS5; Verified; this gene contains 1 exon (675 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YOR069W VPS5 SGDID:S0005595, Chr XV from 454858-455796 605 e-174 YKR078W YKR078W SGDID:S0001786, Chr XI from 584588-586345 136 9e-33 >YOR069W VPS5 SGDID:S0005595, Chr XV from 454858-455796 Length = 312 Score = 605 bits (1560), Expect = e-174 Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 364 MESMLKKICQDPVLQKDKDFLLFLTSDDFSSESKKRAFLTGSGAINDSNDLSEVRISEIQ 423 MESMLKKICQDPVLQKDKDFLLFLTSDDFSSESKKRAFLTGSGAINDSNDLSEVRISEIQ Sbjct: 1 MESMLKKICQDPVLQKDKDFLLFLTSDDFSSESKKRAFLTGSGAINDSNDLSEVRISEIQ 60 Query: 424 LLGAEDAAEVLKNGGIDAESHKGFMSISFSSLPKYNEADEFFIEKKQKIDELEDNLKKLS 483 LLGAEDAAEVLKNGGIDAESHKGFMSISFSSLPKYNEADEFFIEKKQKIDELEDNLKKLS Sbjct: 61 LLGAEDAAEVLKNGGIDAESHKGFMSISFSSLPKYNEADEFFIEKKQKIDELEDNLKKLS 120 Query: 484 KSLEMVDTSRNTLAASTEEFSSMVETLASLNVSEPNSELLNNFADVHKSIKSSLERSSLQ 543 KSLEMVDTSRNTLAASTEEFSSMVETLASLNVSEPNSELLNNFADVHKSIKSSLERSSLQ Sbjct: 121 KSLEMVDTSRNTLAASTEEFSSMVETLASLNVSEPNSELLNNFADVHKSIKSSLERSSLQ 180 Query: 544 ETLTMGVMLDDYIRSLASVKAIFNQRSKLGYFLVVIENDMNKKHSQLGKLGQNIHSEKFR 603 ETLTMGVMLDDYIRSLASVKAIFNQRSKLGYFLVVIENDMNKKHSQLGKLGQNIHSEKFR Sbjct: 181 ETLTMGVMLDDYIRSLASVKAIFNQRSKLGYFLVVIENDMNKKHSQLGKLGQNIHSEKFR 240 Query: 604 EMRKEFQTLERRYNLTKKQWQAVGDKIKDEFQGFSTDKIREFRNGMEISLEAAIESQKEC 663 EMRKEFQTLERRYNLTKKQWQAVGDKIKDEFQGFSTDKIREFRNGMEISLEAAIESQKEC Sbjct: 241 EMRKEFQTLERRYNLTKKQWQAVGDKIKDEFQGFSTDKIREFRNGMEISLEAAIESQKEC 300 Query: 664 IELWETFYQTNL 675 IELWETFYQTNL Sbjct: 301 IELWETFYQTNL 312 >YKR078W YKR078W SGDID:S0001786, Chr XI from 584588-586345 Length = 585 Score = 136 bits (343), Expect = 9e-33 Identities = 111/430 (25%), Positives = 190/430 (44%), Gaps = 77/430 (17%) Query: 317 VSRRYRDFRWLYRQLQNNHWGKVIPPPPEKQSVGSFKENFIENRRF-------------- 362 ++R + DF WLY QLQNNHWGK IPPP + ++ K+ F N F Sbjct: 149 IARAFSDFYWLYHQLQNNHWGKTIPPPT-RSNILVEKDEFAINHLFMIRNNEKYDPIFNF 207 Query: 363 --------QMESMLKKICQDPVLQKDKDFLLFLTSDD----------------------- 391 Q+ +M+K I D VL+ D +F+ F++ DD Sbjct: 208 KPEYIISLQLMAMIKHIFNDKVLRLDSNFIDFISWDDDLPESLQIVVDDSTFTGDKILMT 267 Query: 392 ---------FSSESKKRAFLTGSGA-INDSNDLSEVRISEIQLLGAEDAAEVLKNGGID- 440 F +SKK +T S A + +L+E+ IS +L +D + + D Sbjct: 268 SSQFRELKEFHKQSKKVESITNSHASLIPVTELTEIYISPTKLFSRKDYQRLFQPQSTDN 327 Query: 441 -------------AESHKGFMSISF-SSLPKYNEADEFFIEKKQKIDELEDNLKKLSKS- 485 +S F S+SF SS P Y EA + ++ K+L Sbjct: 328 TFNNNDPLIQEWIPKSKTLFTSLSFGSSAPTYQEASTEIQACHDWVSISKEQWKQLLYHV 387 Query: 486 LEMVDTSRNTLAASTEEFSSMVETLASLNVSEPNSELLNNFADVHKSIKSSLERSSLQET 545 L+ + + + EF+ ++ ++ V NSEL F+ +++S + +S Q+ Sbjct: 388 LQYIVDEAVKVNSVINEFTECLKQISLDEVIRANSELFLKFSKLNESFLKKFKGASRQDI 447 Query: 546 LTMGVMLDDYIRSLASVKAIFNQRSKLGYFLVVIENDMNKKHSQLGKL-----GQNIHSE 600 L + ++ D+ +R S ++I NQR KLG L +IE D++KK + L KL N Sbjct: 448 LKLIILFDENVRFCESFESILNQRLKLGKILSIIEVDLDKKKNFLDKLSPGNNNSNNEDL 507 Query: 601 KFREMRKEFQTLERRYNLTKKQWQAVGDKIKDEFQGFSTDKIREFRNGMEISLEAAIESQ 660 K R E++ + +RYN K+ W+ + + I +E + F + E + ++ + ++ + Sbjct: 508 KIRTAEDEYRIVLKRYNRVKQSWEKIMEDILNERKEFEKREAAEVNSCLKSIRDLNMDEK 567 Query: 661 KECIELWETF 670 K ++LW+ F Sbjct: 568 KHYLQLWQDF 577 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.310 0.129 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,244,834 Number of Sequences: 6497 Number of extensions: 202128 Number of successful extensions: 889 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 885 Number of HSP's gapped (non-prelim): 3 length of query: 675 length of database: 2,996,526 effective HSP length: 97 effective length of query: 578 effective length of database: 2,366,317 effective search space: 1367731226 effective search space used: 1367731226 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YOR087W Annotated|15:487708:489735| frame 1; YOR087W/YVC1; Verified; this gene contains 1 exon (675 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YOR088W YOR088W SGDID:S0005614, Chr XV from 488286-489734 860 0.0 YOR087W YVC1 SGDID:S0005613, Chr XV from 487708-488451 503 e-143 >YOR088W YOR088W SGDID:S0005614, Chr XV from 488286-489734 Length = 482 Score = 860 bits (2223), Expect = 0.0 Identities = 433/451 (96%), Positives = 435/451 (96%) Query: 225 FNPVRLKAPVYQNYLQMIFSFLFLGLYTLVVNGKDSERVQSFDLLESIFYVFNTGFILDE 284 F P ++K LFLGLYTLVVNGKDSERVQSFDLLESIFYVFNTGFILDE Sbjct: 32 FQPRKIKGACIPKLFADDLLILFLGLYTLVVNGKDSERVQSFDLLESIFYVFNTGFILDE 91 Query: 285 LTKLYYIGYAHLSFWNLFNDTTYLIITFAMGFRAMSVTPLNAKYSSEDWDKISYRVLSCA 344 LTKLYYIGYAHLSFWNLFNDTTYLIITFAMGFRAMSVTPLNAKYSSEDWDKISYRVLSCA Sbjct: 92 LTKLYYIGYAHLSFWNLFNDTTYLIITFAMGFRAMSVTPLNAKYSSEDWDKISYRVLSCA 151 Query: 345 APFVWSRLLLYLESQRFIGIMLVILKHMMKESIVFFFLLFLIMIGFTQGFLGLDSADGKR 404 APFVWSRLLLYLESQRFIGIMLVILKHMMKESIVFFFLLFLIMIGFTQGFLGLDSADGKR Sbjct: 152 APFVWSRLLLYLESQRFIGIMLVILKHMMKESIVFFFLLFLIMIGFTQGFLGLDSADGKR 211 Query: 405 DITGPILGNLTITVLGLGSFDVFEEFAPPYAAILYYGYYFIVSVILLNILIALYSTAYQK 464 DITGPILGNLTITVLGLGSFDVFEEFAPPYAAILYYGYYFIVSVILLNILIALYSTAYQK Sbjct: 212 DITGPILGNLTITVLGLGSFDVFEEFAPPYAAILYYGYYFIVSVILLNILIALYSTAYQK 271 Query: 465 VIDNADDEYMALMSQKTLRYIRAPDEDVYVSPLNLIEVFMTPIFRILPPKRAKDLSYTVM 524 VIDNADDEYMALMSQKTLRYIRAPDEDVYVSPLNLIEVFMTPIFRILPPKRAKDLSYTVM Sbjct: 272 VIDNADDEYMALMSQKTLRYIRAPDEDVYVSPLNLIEVFMTPIFRILPPKRAKDLSYTVM 331 Query: 525 TIVYSPFLLLISVKETREARRIKYNRMKRLNDDANEYDTPWDLTDGYLDDDDGLFSDNRN 584 TIVYSPFLLLISVKETREARRIKYNRMKRLNDDANEYDTPWDLTDGYLDDDDGLFSDNRN Sbjct: 332 TIVYSPFLLLISVKETREARRIKYNRMKRLNDDANEYDTPWDLTDGYLDDDDGLFSDNRN 391 Query: 585 SGMRATQLKNSRSLKLQRTAEQEDVHFKVPKKWYKNVKKCSPSFEQYDNDDTEDDAGEDK 644 SGMRATQLKNSRSLKLQRTAEQEDVHFKVPKKWYKNVKKCSPSFEQYDNDDTEDDAGEDK Sbjct: 392 SGMRATQLKNSRSLKLQRTAEQEDVHFKVPKKWYKNVKKCSPSFEQYDNDDTEDDAGEDK 451 Query: 645 DEVKELTKKVENLTAVITDLLEKLDIKDKKE 675 DEVKELTKKVENLTAVITDLLEKLDIKDKKE Sbjct: 452 DEVKELTKKVENLTAVITDLLEKLDIKDKKE 482 >YOR087W YVC1 SGDID:S0005613, Chr XV from 487708-488451 Length = 247 Score = 503 bits (1294), Expect = e-143 Identities = 246/247 (99%), Positives = 246/247 (99%) Query: 1 MVSANGDLHLPISNEQCMPENNGSLGFEAPTPRQILRVTLNLKYLIDKVVPIVYDPNDIV 60 MVSANGDLHLPISNEQCMPENNGSLGFEAPTPRQILRVTLNLKYLIDKVVPIVYDPNDIV Sbjct: 1 MVSANGDLHLPISNEQCMPENNGSLGFEAPTPRQILRVTLNLKYLIDKVVPIVYDPNDIV 60 Query: 61 CDHSEILSPKVVKLAYEACGGNPKDKANKRKYQSVIIFSLLKVCEWYSILATMEVHNAKL 120 CDHSEILSPKVVKLAYEACGGNPKDKANKRKYQSVIIFSLLKVCEWYSILATMEVHNAKL Sbjct: 61 CDHSEILSPKVVKLAYEACGGNPKDKANKRKYQSVIIFSLLKVCEWYSILATMEVHNAKL 120 Query: 121 YETRNLASQQLCKLLIEREETRDLQFLFMQLLLRRYVINENDEDQEPLNALELATDMHCT 180 YETRNLASQQLCKLLIEREETRDLQFLFMQLLLRRYVINENDEDQEPLNALELATDMHCT Sbjct: 121 YETRNLASQQLCKLLIEREETRDLQFLFMQLLLRRYVINENDEDQEPLNALELATDMHCT 180 Query: 181 TVIGSSGFQRCLKWIWRGWIVQNGLDPTTFIKDDSLAEVSLISHFNPVRLKAPVYQNYLQ 240 TVIGSSGFQRCLKWIWRGWIVQNGLDPTTFIKDDSLAEVSLISHFNPVRLKAPVYQNYLQ Sbjct: 181 TVIGSSGFQRCLKWIWRGWIVQNGLDPTTFIKDDSLAEVSLISHFNPVRLKAPVYQNYLQ 240 Query: 241 MIFSFLF 247 MIFSF F Sbjct: 241 MIFSFCF 247 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.322 0.140 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,295,847 Number of Sequences: 6497 Number of extensions: 203480 Number of successful extensions: 1107 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 1103 Number of HSP's gapped (non-prelim): 2 length of query: 675 length of database: 2,996,526 effective HSP length: 97 effective length of query: 578 effective length of database: 2,366,317 effective search space: 1367731226 effective search space used: 1367731226 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 326 (130.2 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YOR298C-A Annotated|15:877682:877227| frame 6; YOR298C-A/MBF1; Verified; this gene contains 1 exon (151 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done ***** No hits found ****** Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.310 0.129 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 854,709 Number of Sequences: 6497 Number of extensions: 32879 Number of successful extensions: 83 Number of sequences better than 1.0e-30: 0 Number of HSP's better than 0.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83 Number of HSP's gapped (non-prelim): 0 length of query: 151 length of database: 2,996,526 effective HSP length: 82 effective length of query: 69 effective length of database: 2,463,772 effective search space: 170000268 effective search space used: 170000268 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 318 (127.1 bits) BLASTP 2.2.6 [Apr-09-2003] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= YPR089W Annotated|16:713273:715939| frame 2; YPR089W; Uncharacterized; this gene contains 1 exon (888 letters) Database: orf_trans 6497 sequences; 2,996,526 total letters Searching.............done Score E Sequences producing significant alignments: (bits) Value YPR090W YPR090W SGDID:S0006294, Chr XVI from 713728-715938 1490 0.0 YPR089W YPR089W SGDID:S0006293, Chr XVI from 713271-713738 280 7e-76 >YPR090W YPR090W SGDID:S0006294, Chr XVI from 713728-715938 Length = 736 Score = 1490 bits (3858), Expect = 0.0 Identities = 736/736 (100%), Positives = 736/736 (100%) Query: 153 MTNKAGLTAWDMVPPYSPLSEFLEQNNMFRYRTEVKHEIPQISQPKDTSLLMSNEDSTTK 212 MTNKAGLTAWDMVPPYSPLSEFLEQNNMFRYRTEVKHEIPQISQPKDTSLLMSNEDSTTK Sbjct: 1 MTNKAGLTAWDMVPPYSPLSEFLEQNNMFRYRTEVKHEIPQISQPKDTSLLMSNEDSTTK 60 Query: 213 ETFDNIDLQVAGLTLSPGANDNMFLDSDEKNMNHSQGAATLIDPTYTEDYHGTFDYDKLS 272 ETFDNIDLQVAGLTLSPGANDNMFLDSDEKNMNHSQGAATLIDPTYTEDYHGTFDYDKLS Sbjct: 61 ETFDNIDLQVAGLTLSPGANDNMFLDSDEKNMNHSQGAATLIDPTYTEDYHGTFDYDKLS 120 Query: 273 PDQYLEFSDFDIPQILNLLISLPQKEPHMTTYPAGLIYQCIRYADHKIKSKPLVESLINL 332 PDQYLEFSDFDIPQILNLLISLPQKEPHMTTYPAGLIYQCIRYADHKIKSKPLVESLINL Sbjct: 121 PDQYLEFSDFDIPQILNLLISLPQKEPHMTTYPAGLIYQCIRYADHKIKSKPLVESLINL 180 Query: 333 SLTKILTSVSSNGAAGLVSTEASLQAGDIVLQSYWLSCLSFLYYYLCRDDSFFKRHPSVL 392 SLTKILTSVSSNGAAGLVSTEASLQAGDIVLQSYWLSCLSFLYYYLCRDDSFFKRHPSVL Sbjct: 181 SLTKILTSVSSNGAAGLVSTEASLQAGDIVLQSYWLSCLSFLYYYLCRDDSFFKRHPSVL 240 Query: 393 QELINTIHSIIIELTSSIHCRLISLIDSTLLAYTTIQDVKQTLYKRDWNFFKKRKQAKLL 452 QELINTIHSIIIELTSSIHCRLISLIDSTLLAYTTIQDVKQTLYKRDWNFFKKRKQAKLL Sbjct: 241 QELINTIHSIIIELTSSIHCRLISLIDSTLLAYTTIQDVKQTLYKRDWNFFKKRKQAKLL 300 Query: 453 LKEKNRKQLKEQQKKELHRKSQGQENHEEEEGQQDGNDSDDRASTNDDNNSSVSLFYDKE 512 LKEKNRKQLKEQQKKELHRKSQGQENHEEEEGQQDGNDSDDRASTNDDNNSSVSLFYDKE Sbjct: 301 LKEKNRKQLKEQQKKELHRKSQGQENHEEEEGQQDGNDSDDRASTNDDNNSSVSLFYDKE 360 Query: 513 ILRHLYPPSFEEQMKPSPLKIVQIFGALSYVLNLHQTHPIFQQQCLSISVNWFATTLFNK 572 ILRHLYPPSFEEQMKPSPLKIVQIFGALSYVLNLHQTHPIFQQQCLSISVNWFATTLFNK Sbjct: 361 ILRHLYPPSFEEQMKPSPLKIVQIFGALSYVLNLHQTHPIFQQQCLSISVNWFATTLFNK 420 Query: 573 ILKDKKKRSLSRAHAIQIRLNLSTLESWIQNNDFCVPKPMLIDDFMWQRFPMTLIRDVGE 632 ILKDKKKRSLSRAHAIQIRLNLSTLESWIQNNDFCVPKPMLIDDFMWQRFPMTLIRDVGE Sbjct: 421 ILKDKKKRSLSRAHAIQIRLNLSTLESWIQNNDFCVPKPMLIDDFMWQRFPMTLIRDVGE 480 Query: 633 IDLSDPILRNVATYKPIDENNKDLIYDTSNSLFYYQPFHKIAQIHLEPVFQLLQWLQVAT 692 IDLSDPILRNVATYKPIDENNKDLIYDTSNSLFYYQPFHKIAQIHLEPVFQLLQWLQVAT Sbjct: 481 IDLSDPILRNVATYKPIDENNKDLIYDTSNSLFYYQPFHKIAQIHLEPVFQLLQWLQVAT 540 Query: 693 TLDSEESLISTMNLLPRITPVQLLKSMEKYNYELNENKFNSKLKKFLNNKIKDSKMSKAD 752 TLDSEESLISTMNLLPRITPVQLLKSMEKYNYELNENKFNSKLKKFLNNKIKDSKMSKAD Sbjct: 541 TLDSEESLISTMNLLPRITPVQLLKSMEKYNYELNENKFNSKLKKFLNNKIKDSKMSKAD 600 Query: 753 AYLQEHEIPYLVLPTIPEMTDLYSKGPDSHSFQPFLPGSIQDDVYEIHDVNFKQRQNEPQ 812 AYLQEHEIPYLVLPTIPEMTDLYSKGPDSHSFQPFLPGSIQDDVYEIHDVNFKQRQNEPQ Sbjct: 601 AYLQEHEIPYLVLPTIPEMTDLYSKGPDSHSFQPFLPGSIQDDVYEIHDVNFKQRQNEPQ 660 Query: 813 ISRTNSGTSDFTGDEDKAQYETEGVGESIDINETVEPESNAFNVGNDDYFKELNIPSSTA 872 ISRTNSGTSDFTGDEDKAQYETEGVGESIDINETVEPESNAFNVGNDDYFKELNIPSSTA Sbjct: 661 ISRTNSGTSDFTGDEDKAQYETEGVGESIDINETVEPESNAFNVGNDDYFKELNIPSSTA 720 Query: 873 QRPAWSNNDDMEQNPW 888 QRPAWSNNDDMEQNPW Sbjct: 721 QRPAWSNNDDMEQNPW 736 >YPR089W YPR089W SGDID:S0006293, Chr XVI from 713271-713738 Length = 155 Score = 280 bits (716), Expect = 7e-76 Identities = 138/140 (98%), Positives = 138/140 (98%) Query: 1 MNSVWDDARIEDRTVDKPVGSSHAQEKLALVKSTLFKLDQEDRPECDSWVQLVKLICDED 60 MNSVWDDARIEDRTVDKPVGSSHAQEKLALVKSTLFKLDQEDRPECDSWVQLVKLICDED Sbjct: 1 MNSVWDDARIEDRTVDKPVGSSHAQEKLALVKSTLFKLDQEDRPECDSWVQLVKLICDED 60 Query: 61 REEEFTTFKELLREVKNVNDKSVTGVALIHYIIVFDRADYIELLHDNPSGAKLDLNLVDD 120 REEEFTTFKELLREVKNVNDKSVTGVALIHYIIVFDRADYIELLHDNPSGAKLDLNLVDD Sbjct: 61 REEEFTTFKELLREVKNVNDKSVTGVALIHYIIVFDRADYIELLHDNPSGAKLDLNLVDD 120 Query: 121 IVGYTPLMWSFSLQRRNCCL 140 IVGYTPLMWSFSLQRRN L Sbjct: 121 IVGYTPLMWSFSLQRRNLLL 140 Database: orf_trans Posted date: Feb 8, 2003 10:33 AM Number of letters in database: 2,996,526 Number of sequences in database: 6497 Lambda K H 0.316 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,082,506 Number of Sequences: 6497 Number of extensions: 306182 Number of successful extensions: 2559 Number of sequences better than 1.0e-30: 2 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2551 Number of HSP's gapped (non-prelim): 2 length of query: 888 length of database: 2,996,526 effective HSP length: 99 effective length of query: 789 effective length of database: 2,353,323 effective search space: 1856771847 effective search space used: 1856771847 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 327 (130.6 bits)