Create or Tune Up a Multiple Alignment
This form will let you create or improve a multiple sequence alignment using hidden Markov models and the SAM system. Depending on the size of your query, processing can take seconds to hours, so you will receive the improved multiple sequence alignment via email.
Note: this page is quickly becoming obsolete, having been
superseded by the more accurate and more featureful
SAM-T99 tuneup web page.
Sequence format is important. SAM uses D.G. Gilbert's
Be sure sequences are separated appropriately and that there is a newline at the end
of your paste.
For example: >Seq1